Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g01207 ATGTGTAATAAAGAAATTGCAAGTTTGAGCCAGTTCACGAGCCTATTTGATCGGGAAAATAGTCATTATCAGGCCTTATACACCATGGGAAGTCCTTCCGCTGCCCCAAACTCACTTCCCACCTCCTCTCCTGGATCAAATCCTGGTTCAACTGATGAAACGCCCCGTGTGAAGTTTCTGTGTAGTTTTCTAGGAAGCATAATGCCTCGGCCACAGGACGGAAAGCTTCGGTATGTTGGTGGAGAGACTAGAATTGTTAGCGTGTCTAGAGACATTACTTATGAGGAATTAATGAATAAGATGAAGGAAATTTATGAAGGAGCATCGCTGCTTAAGTATCAGCAACCAGATGAAGATCTTGATGCTCTTGTCTCTGTTGTAAATGATGATGATGTTATTAATATGATGGAGGAATATGACAAATTAGGTTCAGGAGATGGAATCACCAAGCTTAGGATATTTTTATCTTCTCATCCTGATTTAGATGGTTCTTCTGCTTTTGTTGATGGAGATGAGAGGGACAATGAGAAAAGATATGTTGATGCTCTTAATAATTTAAATGATGCTACCGATATTAGGAAACAACAGCTTCCCGACTCTCCTGTGGTTGGCCCTCTTGATGATTTTCATGGGTCAGACCAGTTTTTCAATCCATTAAGTCCTGATGGAAGCTTCCATAGCCAAAGGAATTATGATCCCTTGCCACAATATAATCTCGGTTGCCTTAACATCCCTCAGCTTTCTGCTTCTCAGAGGTATAATGAAATGGAAGCACCGTGGAGTCCTGGTTACTATTCTCCCAGGCATCACGGGCCCCATGATTTTAGGCCAATGCCTGAATTTCCTTTGTCTCCTTCTTCTGCACGGTATAGGATGCCCTTTGCAGATTTACCTCCTGACGACTACCCTCGCCAGTCAGTGAATCACCTGCCAACATTTGAACACCAGCCACAATTTTCAGAGAATGTAGTATGGCTGCAAAATGGAGGCGTAACTTGTGAAAAATCAGGCTTTCCAGGTAATATTCTTCAAAGTCAGAGTGTTTTCGATGGGAGCAATATTTGTGAGCATTGTCATATGAATTTTCAAAGAAACCAATCCCATTTGGAACATGGCAATGTTGTCAATGGACTTCCCCAAAGTGGTGATCATTGCGTTGAAAGCCTTCCAGGTAGGGAAGTTTTCAAGGTAAATGCAGACACAAAATTTCATCATGGAATTTTTCCCAGTGATGCAAAGAATGATCCTCGAGTGGCTTATAATGAAACTCAAAATCAGGAGAGGGGATGGGTTTTGCAACATCAATTGAATGTGCGAGTTGAGGATGTGAGAGCACATGCATCTGGAACAGGAAGAGTGAGTGATCAATATATTATGGATGGTCCCAGCTTGAATTTTCCTATTGGACACAGTAATTTAACAGAGAGTCACCGTGCATCCCCAAATTTACATCAACGAGCCGGATCAGAAATGGGAAATGAGGTATATCATGATCAAGCCATTCCTGCTATATCACATTTACATATTTCAACGCCAGAGGAACGAGTTCGATATGGAATTATGCCATATGCTTATGGTGGAGATAATCAGTACCCATCAGTGTCCCATGGTCATGGACCTGGAAATGTTGTATGGAGAAATATTCCAAACTCATTGCATGTTGCACCTGCTCCCTCTTATGAAGCATCCAATTCTCATCAACAAGTGAATGGTATGGCTAATTCAGGATATATGAGGGGGGTGCGAGAAGGTAATGCGCAGTTTTATATTGGAATGGACAATCAAAATCCATGGCTTGATTCCTCCCAAAGAATTGGGCTTGAGGGAACAGCCTGTTCCGAATACACATATGGAAATGCTTTGAGAATTAATACAAATACTGTTGGCCATGAAAATCAACAGTTCTCCACCCTGGATGATATTCGATCAACTCCTGAGAAGAAAGCTGTTCAGTTATTAGACTCGTCGGTTCTATTAAATAATGATAAATTGGTTTTTTCTGCTGCTCCTCAGAATTCACGATCAAAAGTTGATGCCCATTTAACTGAAACTATGATGGTGGAGATCTCAAATATTCCAGTAGAAGAGGCAAGTAATTTAGTTAGACTTGACAGTGGCAATGCTCAATCTCTTGCATGTCCAGAGGATCGTGAATTACAAAATAATAGTTTCCCCGCTGTTCCTTCTGGTTTTCCTATTTGCTTAAACTATCCGGAACAGAACAATGATGTTCAGAAACCAAGCGAAGAAGATTTTCATGCTCCTAAAGAATTGACACTCTCCATCAATGATCTAAGTTTCTTACCTGACTTAATTGCTTCTGTAAAGCGAGTAGCATTAGAAGAAGCTGAAGAGATGGCACCTGTGGCCAATGGAAGTGCTTCAACAAAGCCTGACTCGGTAGCCAAAGAAGAAGCAGGAAATGAGTTTGAGGCGGTGAATGTTCAAGGTAGATCGGAGCAGGAAACTGATGATGACTATCTAAAACCATCAAAAATTGAGCCCACAAAAGCTGAGGCAGAAGCCATTGCCAGGGGATTGCAGACTATAAAAAATGATGATCTAGAAGAGATTCGAGAACTGGGATGTGGGACATATGGGGCTGTTTATCATGGAAAATGGAAAGGTTCTGATGTAGCAATAAAAAGAATTAAAGCCAGTTGCTTTGCTGGGCGCCCATCAGAAAGAGAGCGCTTGATTGCCGATTTCTGGAAGGAGGCTCTGATATTAAGTTCTTTACATCACCCAAATGTTGTTTCCTTTTATGGAATCGTGCGAGATGGTCCTGATGGATCCTTAGCGACTGTAACGGAATTCATGATAAATGGATCCTTAAAACAGTTTTTGCAAAAGAAGGACAGGACAATTGACCGTCGCAAGAGACTCATCATAGCTATGGACGCATCATTTGGCATGGAGTATTTGCATGGAAAGAACATTGTACATTTTGATTTGAAATGTGAAAATCTCTTAGTGAACATGAGGGATCCTCAGAGACCCGTATGCAAGATTGGCGATTTAGGCTTATCTAAAGTGAGACAGCACACTTTAGTCTCCGGCGGGGTTCGCGGAACTTTACCATGGATGGCACCTGAGCTTCTTAGTGGGAAAAGTAACATGGTAACTGAAAAGATTGATGTGTACTCATTTGGTATCGTCATGTGGGAGGTTCTTACTGGAGATGAACCTTATGCGGATATGCACTGCGCTTCTATTATTGGAGGAATAGTGAATAATACGTTACGACCTCAAATTCCATCATGGTGTGATCCCGAATGGAAGGCTTTGATGGAAAGTTGTTGGGATTCTGATCCAGCTAAGAGACCATCATTTTCAGAAATATCTCAAAAGCTGAGAAATATGGCTGCTGCAATGAATTTGAAATAA 3387 41.42 MCNKEIASLSQFTSLFDRENSHYQALYTMGSPSAAPNSLPTSSPGSNPGSTDETPRVKFLCSFLGSIMPRPQDGKLRYVGGETRIVSVSRDITYEELMNKMKEIYEGASLLKYQQPDEDLDALVSVVNDDDVINMMEEYDKLGSGDGITKLRIFLSSHPDLDGSSAFVDGDERDNEKRYVDALNNLNDATDIRKQQLPDSPVVGPLDDFHGSDQFFNPLSPDGSFHSQRNYDPLPQYNLGCLNIPQLSASQRYNEMEAPWSPGYYSPRHHGPHDFRPMPEFPLSPSSARYRMPFADLPPDDYPRQSVNHLPTFEHQPQFSENVVWLQNGGVTCEKSGFPGNILQSQSVFDGSNICEHCHMNFQRNQSHLEHGNVVNGLPQSGDHCVESLPGREVFKVNADTKFHHGIFPSDAKNDPRVAYNETQNQERGWVLQHQLNVRVEDVRAHASGTGRVSDQYIMDGPSLNFPIGHSNLTESHRASPNLHQRAGSEMGNEVYHDQAIPAISHLHISTPEERVRYGIMPYAYGGDNQYPSVSHGHGPGNVVWRNIPNSLHVAPAPSYEASNSHQQVNGMANSGYMRGVREGNAQFYIGMDNQNPWLDSSQRIGLEGTACSEYTYGNALRINTNTVGHENQQFSTLDDIRSTPEKKAVQLLDSSVLLNNDKLVFSAAPQNSRSKVDAHLTETMMVEISNIPVEEASNLVRLDSGNAQSLACPEDRELQNNSFPAVPSGFPICLNYPEQNNDVQKPSEEDFHAPKELTLSINDLSFLPDLIASVKRVALEEAEEMAPVANGSASTKPDSVAKEEAGNEFEAVNVQGRSEQETDDDYLKPSKIEPTKAEAEAIARGLQTIKNDDLEEIRELGCGTYGAVYHGKWKGSDVAIKRIKASCFAGRPSERERLIADFWKEALILSSLHHPNVVSFYGIVRDGPDGSLATVTEFMINGSLKQFLQKKDRTIDRRKRLIIAMDASFGMEYLHGKNIVHFDLKCENLLVNMRDPQRPVCKIGDLGLSKVRQHTLVSGGVRGTLPWMAPELLSGKSNMVTEKIDVYSFGIVMWEVLTGDEPYADMHCASIIGGIVNNTLRPQIPSWCDPEWKALMESCWDSDPAKRPSFSEISQKLRNMAAAMNLK 1128
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 17402564 17411450 - Bpe010879.3 Bpe13g01207 113987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g01207 1128 ProSitePatterns Protein kinases ATP-binding region signature. 861 882 IPR017441 GO:0005524
Bpe13g01207 1128 SMART PB1_new 71 156 IPR000270 GO:0005515
Bpe13g01207 1128 MobiDBLite consensus disorder prediction 28 53 - -
Bpe13g01207 1128 Pfam PB1 domain 72 155 IPR000270 GO:0005515
Bpe13g01207 1128 SUPERFAMILY Protein kinase-like (PK-like) 847 1116 IPR011009 -
Bpe13g01207 1128 CDD PB1_UP2 60 155 - -
Bpe13g01207 1128 Gene3D Phosphorylase Kinase; domain 1 841 940 - -
Bpe13g01207 1128 Gene3D Transferase(Phosphotransferase) domain 1 941 1127 - -
Bpe13g01207 1128 Gene3D - 75 158 - -
Bpe13g01207 1128 PANTHER SERINE-THREONINE PROTEIN KINASE 47 1128 - -
Bpe13g01207 1128 ProSiteProfiles Protein kinase domain profile. 855 1121 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe13g01207 1128 SUPERFAMILY CAD & PB1 domains 73 162 - -
Bpe13g01207 1128 MobiDBLite consensus disorder prediction 28 54 - -
Bpe13g01207 1128 SMART serkin_6 855 1124 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe13g01207 1128 ProSitePatterns Serine/Threonine protein kinases active-site signature. 980 992 IPR008271 GO:0004672|GO:0006468
Bpe13g01207 1128 Pfam Protein tyrosine and serine/threonine kinase 856 1118 IPR001245 GO:0004672|GO:0006468
Bpe13g01207 1128 MobiDBLite consensus disorder prediction 789 829 - -
Bpe13g01207 1128 PRINTS Tyrosine kinase catalytic domain signature 974 992 IPR001245 GO:0004672|GO:0006468
Bpe13g01207 1128 PRINTS Tyrosine kinase catalytic domain signature 1045 1067 IPR001245 GO:0004672|GO:0006468
Bpe13g01207 1128 PRINTS Tyrosine kinase catalytic domain signature 937 950 IPR001245 GO:0004672|GO:0006468
Bpe13g01207 1128 PRINTS Tyrosine kinase catalytic domain signature 1089 1111 IPR001245 GO:0004672|GO:0006468
Bpe13g01207 1128 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 47 1128 - -
Bpe13g01207 1128 CDD STKc_MAP3K-like 861 1118 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g02094 Bpe13g01207 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe10g00807 Bpe-Chr10:14181325 Bpe13g01207 Bpe-Chr13:17402564 2.00E-30 dispersed
Bpe11g01797 Bpe-Chr11:14322658 Bpe13g01207 Bpe-Chr13:17402564 7.24E-29 dispersed
Bpe13g01207 Bpe-Chr13:17402564 Bpe13g00378 Bpe-Chr13:11520049 6.87E-50 dispersed
Bpe07g00501 Bpe-Chr7:9863511 Bpe13g01207 Bpe-Chr13:17402564 2.39E-30 transposed
Bpe12g00377 Bpe-Chr12:9038264 Bpe13g01207 Bpe-Chr13:17402564 3.23E-16 transposed
Bpe14g01297 Bpe-Chr14:9906783 Bpe13g01207 Bpe-Chr13:17402564 4.10E-29 transposed
Bpe01g00631 Bpe-Chr1:4200836 Bpe13g01207 Bpe-Chr13:17402564 2.81E-32 wgd
Bpe13g01207 Bpe-Chr13:17402564 Bpe02g02094 Bpe-Chr2:22413923 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63685 PF07714 PK_Tyr_Ser-Thr 9.50E-61 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g01207 - - zju:107412947 1435.62