Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe13g01207 | ATGTGTAATAAAGAAATTGCAAGTTTGAGCCAGTTCACGAGCCTATTTGATCGGGAAAATAGTCATTATCAGGCCTTATACACCATGGGAAGTCCTTCCGCTGCCCCAAACTCACTTCCCACCTCCTCTCCTGGATCAAATCCTGGTTCAACTGATGAAACGCCCCGTGTGAAGTTTCTGTGTAGTTTTCTAGGAAGCATAATGCCTCGGCCACAGGACGGAAAGCTTCGGTATGTTGGTGGAGAGACTAGAATTGTTAGCGTGTCTAGAGACATTACTTATGAGGAATTAATGAATAAGATGAAGGAAATTTATGAAGGAGCATCGCTGCTTAAGTATCAGCAACCAGATGAAGATCTTGATGCTCTTGTCTCTGTTGTAAATGATGATGATGTTATTAATATGATGGAGGAATATGACAAATTAGGTTCAGGAGATGGAATCACCAAGCTTAGGATATTTTTATCTTCTCATCCTGATTTAGATGGTTCTTCTGCTTTTGTTGATGGAGATGAGAGGGACAATGAGAAAAGATATGTTGATGCTCTTAATAATTTAAATGATGCTACCGATATTAGGAAACAACAGCTTCCCGACTCTCCTGTGGTTGGCCCTCTTGATGATTTTCATGGGTCAGACCAGTTTTTCAATCCATTAAGTCCTGATGGAAGCTTCCATAGCCAAAGGAATTATGATCCCTTGCCACAATATAATCTCGGTTGCCTTAACATCCCTCAGCTTTCTGCTTCTCAGAGGTATAATGAAATGGAAGCACCGTGGAGTCCTGGTTACTATTCTCCCAGGCATCACGGGCCCCATGATTTTAGGCCAATGCCTGAATTTCCTTTGTCTCCTTCTTCTGCACGGTATAGGATGCCCTTTGCAGATTTACCTCCTGACGACTACCCTCGCCAGTCAGTGAATCACCTGCCAACATTTGAACACCAGCCACAATTTTCAGAGAATGTAGTATGGCTGCAAAATGGAGGCGTAACTTGTGAAAAATCAGGCTTTCCAGGTAATATTCTTCAAAGTCAGAGTGTTTTCGATGGGAGCAATATTTGTGAGCATTGTCATATGAATTTTCAAAGAAACCAATCCCATTTGGAACATGGCAATGTTGTCAATGGACTTCCCCAAAGTGGTGATCATTGCGTTGAAAGCCTTCCAGGTAGGGAAGTTTTCAAGGTAAATGCAGACACAAAATTTCATCATGGAATTTTTCCCAGTGATGCAAAGAATGATCCTCGAGTGGCTTATAATGAAACTCAAAATCAGGAGAGGGGATGGGTTTTGCAACATCAATTGAATGTGCGAGTTGAGGATGTGAGAGCACATGCATCTGGAACAGGAAGAGTGAGTGATCAATATATTATGGATGGTCCCAGCTTGAATTTTCCTATTGGACACAGTAATTTAACAGAGAGTCACCGTGCATCCCCAAATTTACATCAACGAGCCGGATCAGAAATGGGAAATGAGGTATATCATGATCAAGCCATTCCTGCTATATCACATTTACATATTTCAACGCCAGAGGAACGAGTTCGATATGGAATTATGCCATATGCTTATGGTGGAGATAATCAGTACCCATCAGTGTCCCATGGTCATGGACCTGGAAATGTTGTATGGAGAAATATTCCAAACTCATTGCATGTTGCACCTGCTCCCTCTTATGAAGCATCCAATTCTCATCAACAAGTGAATGGTATGGCTAATTCAGGATATATGAGGGGGGTGCGAGAAGGTAATGCGCAGTTTTATATTGGAATGGACAATCAAAATCCATGGCTTGATTCCTCCCAAAGAATTGGGCTTGAGGGAACAGCCTGTTCCGAATACACATATGGAAATGCTTTGAGAATTAATACAAATACTGTTGGCCATGAAAATCAACAGTTCTCCACCCTGGATGATATTCGATCAACTCCTGAGAAGAAAGCTGTTCAGTTATTAGACTCGTCGGTTCTATTAAATAATGATAAATTGGTTTTTTCTGCTGCTCCTCAGAATTCACGATCAAAAGTTGATGCCCATTTAACTGAAACTATGATGGTGGAGATCTCAAATATTCCAGTAGAAGAGGCAAGTAATTTAGTTAGACTTGACAGTGGCAATGCTCAATCTCTTGCATGTCCAGAGGATCGTGAATTACAAAATAATAGTTTCCCCGCTGTTCCTTCTGGTTTTCCTATTTGCTTAAACTATCCGGAACAGAACAATGATGTTCAGAAACCAAGCGAAGAAGATTTTCATGCTCCTAAAGAATTGACACTCTCCATCAATGATCTAAGTTTCTTACCTGACTTAATTGCTTCTGTAAAGCGAGTAGCATTAGAAGAAGCTGAAGAGATGGCACCTGTGGCCAATGGAAGTGCTTCAACAAAGCCTGACTCGGTAGCCAAAGAAGAAGCAGGAAATGAGTTTGAGGCGGTGAATGTTCAAGGTAGATCGGAGCAGGAAACTGATGATGACTATCTAAAACCATCAAAAATTGAGCCCACAAAAGCTGAGGCAGAAGCCATTGCCAGGGGATTGCAGACTATAAAAAATGATGATCTAGAAGAGATTCGAGAACTGGGATGTGGGACATATGGGGCTGTTTATCATGGAAAATGGAAAGGTTCTGATGTAGCAATAAAAAGAATTAAAGCCAGTTGCTTTGCTGGGCGCCCATCAGAAAGAGAGCGCTTGATTGCCGATTTCTGGAAGGAGGCTCTGATATTAAGTTCTTTACATCACCCAAATGTTGTTTCCTTTTATGGAATCGTGCGAGATGGTCCTGATGGATCCTTAGCGACTGTAACGGAATTCATGATAAATGGATCCTTAAAACAGTTTTTGCAAAAGAAGGACAGGACAATTGACCGTCGCAAGAGACTCATCATAGCTATGGACGCATCATTTGGCATGGAGTATTTGCATGGAAAGAACATTGTACATTTTGATTTGAAATGTGAAAATCTCTTAGTGAACATGAGGGATCCTCAGAGACCCGTATGCAAGATTGGCGATTTAGGCTTATCTAAAGTGAGACAGCACACTTTAGTCTCCGGCGGGGTTCGCGGAACTTTACCATGGATGGCACCTGAGCTTCTTAGTGGGAAAAGTAACATGGTAACTGAAAAGATTGATGTGTACTCATTTGGTATCGTCATGTGGGAGGTTCTTACTGGAGATGAACCTTATGCGGATATGCACTGCGCTTCTATTATTGGAGGAATAGTGAATAATACGTTACGACCTCAAATTCCATCATGGTGTGATCCCGAATGGAAGGCTTTGATGGAAAGTTGTTGGGATTCTGATCCAGCTAAGAGACCATCATTTTCAGAAATATCTCAAAAGCTGAGAAATATGGCTGCTGCAATGAATTTGAAATAA | 3387 | 41.42 | MCNKEIASLSQFTSLFDRENSHYQALYTMGSPSAAPNSLPTSSPGSNPGSTDETPRVKFLCSFLGSIMPRPQDGKLRYVGGETRIVSVSRDITYEELMNKMKEIYEGASLLKYQQPDEDLDALVSVVNDDDVINMMEEYDKLGSGDGITKLRIFLSSHPDLDGSSAFVDGDERDNEKRYVDALNNLNDATDIRKQQLPDSPVVGPLDDFHGSDQFFNPLSPDGSFHSQRNYDPLPQYNLGCLNIPQLSASQRYNEMEAPWSPGYYSPRHHGPHDFRPMPEFPLSPSSARYRMPFADLPPDDYPRQSVNHLPTFEHQPQFSENVVWLQNGGVTCEKSGFPGNILQSQSVFDGSNICEHCHMNFQRNQSHLEHGNVVNGLPQSGDHCVESLPGREVFKVNADTKFHHGIFPSDAKNDPRVAYNETQNQERGWVLQHQLNVRVEDVRAHASGTGRVSDQYIMDGPSLNFPIGHSNLTESHRASPNLHQRAGSEMGNEVYHDQAIPAISHLHISTPEERVRYGIMPYAYGGDNQYPSVSHGHGPGNVVWRNIPNSLHVAPAPSYEASNSHQQVNGMANSGYMRGVREGNAQFYIGMDNQNPWLDSSQRIGLEGTACSEYTYGNALRINTNTVGHENQQFSTLDDIRSTPEKKAVQLLDSSVLLNNDKLVFSAAPQNSRSKVDAHLTETMMVEISNIPVEEASNLVRLDSGNAQSLACPEDRELQNNSFPAVPSGFPICLNYPEQNNDVQKPSEEDFHAPKELTLSINDLSFLPDLIASVKRVALEEAEEMAPVANGSASTKPDSVAKEEAGNEFEAVNVQGRSEQETDDDYLKPSKIEPTKAEAEAIARGLQTIKNDDLEEIRELGCGTYGAVYHGKWKGSDVAIKRIKASCFAGRPSERERLIADFWKEALILSSLHHPNVVSFYGIVRDGPDGSLATVTEFMINGSLKQFLQKKDRTIDRRKRLIIAMDASFGMEYLHGKNIVHFDLKCENLLVNMRDPQRPVCKIGDLGLSKVRQHTLVSGGVRGTLPWMAPELLSGKSNMVTEKIDVYSFGIVMWEVLTGDEPYADMHCASIIGGIVNNTLRPQIPSWCDPEWKALMESCWDSDPAKRPSFSEISQKLRNMAAAMNLK | 1128 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 17402564 | 17411450 | - | Bpe010879.3 | Bpe13g01207 | 113987 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe13g01207 | 1128 | ProSitePatterns | Protein kinases ATP-binding region signature. | 861 | 882 | IPR017441 | GO:0005524 | |
Bpe13g01207 | 1128 | SMART | PB1_new | 71 | 156 | IPR000270 | GO:0005515 | |
Bpe13g01207 | 1128 | MobiDBLite | consensus disorder prediction | 28 | 53 | - | - | |
Bpe13g01207 | 1128 | Pfam | PB1 domain | 72 | 155 | IPR000270 | GO:0005515 | |
Bpe13g01207 | 1128 | SUPERFAMILY | Protein kinase-like (PK-like) | 847 | 1116 | IPR011009 | - | |
Bpe13g01207 | 1128 | CDD | PB1_UP2 | 60 | 155 | - | - | |
Bpe13g01207 | 1128 | Gene3D | Phosphorylase Kinase; domain 1 | 841 | 940 | - | - | |
Bpe13g01207 | 1128 | Gene3D | Transferase(Phosphotransferase) domain 1 | 941 | 1127 | - | - | |
Bpe13g01207 | 1128 | Gene3D | - | 75 | 158 | - | - | |
Bpe13g01207 | 1128 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 47 | 1128 | - | - | |
Bpe13g01207 | 1128 | ProSiteProfiles | Protein kinase domain profile. | 855 | 1121 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe13g01207 | 1128 | SUPERFAMILY | CAD & PB1 domains | 73 | 162 | - | - | |
Bpe13g01207 | 1128 | MobiDBLite | consensus disorder prediction | 28 | 54 | - | - | |
Bpe13g01207 | 1128 | SMART | serkin_6 | 855 | 1124 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe13g01207 | 1128 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 980 | 992 | IPR008271 | GO:0004672|GO:0006468 | |
Bpe13g01207 | 1128 | Pfam | Protein tyrosine and serine/threonine kinase | 856 | 1118 | IPR001245 | GO:0004672|GO:0006468 | |
Bpe13g01207 | 1128 | MobiDBLite | consensus disorder prediction | 789 | 829 | - | - | |
Bpe13g01207 | 1128 | PRINTS | Tyrosine kinase catalytic domain signature | 974 | 992 | IPR001245 | GO:0004672|GO:0006468 | |
Bpe13g01207 | 1128 | PRINTS | Tyrosine kinase catalytic domain signature | 1045 | 1067 | IPR001245 | GO:0004672|GO:0006468 | |
Bpe13g01207 | 1128 | PRINTS | Tyrosine kinase catalytic domain signature | 937 | 950 | IPR001245 | GO:0004672|GO:0006468 | |
Bpe13g01207 | 1128 | PRINTS | Tyrosine kinase catalytic domain signature | 1089 | 1111 | IPR001245 | GO:0004672|GO:0006468 | |
Bpe13g01207 | 1128 | PANTHER | KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN | 47 | 1128 | - | - | |
Bpe13g01207 | 1128 | CDD | STKc_MAP3K-like | 861 | 1118 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe02g02094 | Bpe13g01207 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe10g00807 | Bpe-Chr10:14181325 | Bpe13g01207 | Bpe-Chr13:17402564 | 2.00E-30 | dispersed | |
Bpe11g01797 | Bpe-Chr11:14322658 | Bpe13g01207 | Bpe-Chr13:17402564 | 7.24E-29 | dispersed | |
Bpe13g01207 | Bpe-Chr13:17402564 | Bpe13g00378 | Bpe-Chr13:11520049 | 6.87E-50 | dispersed | |
Bpe07g00501 | Bpe-Chr7:9863511 | Bpe13g01207 | Bpe-Chr13:17402564 | 2.39E-30 | transposed | |
Bpe12g00377 | Bpe-Chr12:9038264 | Bpe13g01207 | Bpe-Chr13:17402564 | 3.23E-16 | transposed | |
Bpe14g01297 | Bpe-Chr14:9906783 | Bpe13g01207 | Bpe-Chr13:17402564 | 4.10E-29 | transposed | |
Bpe01g00631 | Bpe-Chr1:4200836 | Bpe13g01207 | Bpe-Chr13:17402564 | 2.81E-32 | wgd | |
Bpe13g01207 | Bpe-Chr13:17402564 | Bpe02g02094 | Bpe-Chr2:22413923 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
63685 | PF07714 | PK_Tyr_Ser-Thr | 9.50E-61 | CL0016 | Bpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe13g01207 | - | - | zju:107412947 | 1435.62 |