Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g01208 ATGCAGAGACAGACTCGGTTAATGGAGAGGACAAGCTCTATGAGGGGAAAAAGGAGCTTGGATGGTGGAGAAGAAGAGCAGCTGGAGCGAAAGCGCCCTGCCCTCGCCAGTGTGATAGTGGAAGCGCTGAAGGTTGATAGTTTGCAGAAGCTGTGCTCATCTTTGGAGCCTATCCTTCGTAGAGTTGTGAGTGAAGAGGTGGAACGTGCTTTAGCAAAGTTAGGCCCTGCTAGACTTGGTGGAAGATCTTCTCCTAAAAGAATTGAAGGTCCTGATGGAGGAAATTTGCAGCTGCAGTTTAGATCTAGATTGTCTCTTCCCTTGTTCACTGGAGGGAAATTGGAAGGCGAACAGGGTGCTGCAATTCATGTTGTCCTGCTTGATGTCAACAGTGGAATTGTTGTAACTTCAGGACCTGAATCCATGGCAAAACTTGATGTTGTTGTCCTTGAAGGAGATTTCAATAATGAAGATGATGAAGACTGGACAGAGGAAGAATTTGAAAGTCACGTAGTCAAAGAGCGTGAAGGAAAGAGGCCTTTATTAACTGGGGATCTCCAAGTTACTTTAAAAGAAGGGGTTGGAACGTTAGGCGATCTCACTTTCACTGATAATTCAAGCTGGATCCGGAGTAGAAAGTTTAGACTTGGCTTGAAGGTTTCTGCTGGAAGTTTTGAAGGCATACGCATACGTGAAGCAAAGACTGAAGCGTTTACTGTGAAAGATCACAGAGGAGAATTGTACAAGAAACATTATCCTCCAGCTATAAATGATGAAGTTTGGAGATTAGAGAAAATTGGAAAAGATGGTTCATTCCATAAAAGATTAAATGCTAATGGAATATATTCAGTTGAAGACTTCCTTCGATTGGTGGTTCGAGACTCTCAAAAGTTACGGACTATTCTTGGAAGTGGAATGTCAAATAAGATGTGGGATGCTCTCTTAGAGCATTCTAAGACATGTGTCCTTAGTGAGAAGCTTTATATTTACTATCCTGAGGATACAAGAAATGTTGGAGTTGTGTTCAACAATATCTATGAGCTAAGTGGCTTAATTGCTGGAGATCAATATCACTCTGCTGACGATCTTTCTGACAATCAGAAGGTCTATGTTGATACACTGGTGAAGAAAGCATATGATAATTGGAGTCAAGTTGTTGAGTATGATGGGAAGTCACTTTTTGGCTTCAAGCAAACAAAAAAGTCAATCACTTCCAGAAATGAACTTCATGCCGGCCATCTTGATTTTTCAAACTCTTTAGACCATGAAATGCCACTGTCACGGCTGCCTGTATCAGTGCCATCTGAACAGGCTTTAGCAGAATCAGGTCTACCCGTTGGAGGTTCTGGTTATAATGGTAGCATGGCCACAAGGTATTCAAACCCATCACAGGTCATGAATTCAACGAATTCTCGTGCTCGATTTGTAAATACTGGATATGCACAGAATGAGCTAGTTAATAATCATCAGCAAAATCAGAACACAAGAAATGATCATACTCCTTTTGATTTGGCTCTTGGCCCACCCCAATCGGCAATGCCTGGCTTCCAAACTATCGGCTCATCCAGTCTGCAGTCTAATAACAACCCATTTGATGAATGGTCAAACAACCGAGAAAAGGGAGTGGATCACTTTCTTTCAGAAGAAGAGATTCGCATCAGAAGTCACGAAATGCTTGAAAATGAAGATATGCAGCATTTGCTACAAATGTTTAGTATGGGTGGTCATGCCTCTGTAAATATGCCGGAGGATGGATTTGCATACCCTTCATTTATGTCATCTCCAATGCCTGCTTTTGAGGAAGATCGAAGTCGCTCTGGCCGAGCTGTTGTCGGGTGGTTAAAGATCAAAGCAGCTATGAGATGGGGATTTTTTATACGGAAAAAGGCTGCAGAGAGGCGAGCTCAGATTGTTGAGTTGGAAGATGATTAG 1932 42.34 MQRQTRLMERTSSMRGKRSLDGGEEEQLERKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPARLGGRSSPKRIEGPDGGNLQLQFRSRLSLPLFTGGKLEGEQGAAIHVVLLDVNSGIVVTSGPESMAKLDVVVLEGDFNNEDDEDWTEEEFESHVVKEREGKRPLLTGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVSAGSFEGIRIREAKTEAFTVKDHRGELYKKHYPPAINDEVWRLEKIGKDGSFHKRLNANGIYSVEDFLRLVVRDSQKLRTILGSGMSNKMWDALLEHSKTCVLSEKLYIYYPEDTRNVGVVFNNIYELSGLIAGDQYHSADDLSDNQKVYVDTLVKKAYDNWSQVVEYDGKSLFGFKQTKKSITSRNELHAGHLDFSNSLDHEMPLSRLPVSVPSEQALAESGLPVGGSGYNGSMATRYSNPSQVMNSTNSRARFVNTGYAQNELVNNHQQNQNTRNDHTPFDLALGPPQSAMPGFQTIGSSSLQSNNNPFDEWSNNREKGVDHFLSEEEIRIRSHEMLENEDMQHLLQMFSMGGHASVNMPEDGFAYPSFMSSPMPAFEEDRSRSGRAVVGWLKIKAAMRWGFFIRKKAAERRAQIVELEDD 643
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 17426729 17432356 + Bpe010880.1 Bpe13g01208 113988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g01208 643 PANTHER OS02G0177800 PROTEIN 7 641 IPR012416 GO:0005516
Bpe13g01208 643 PANTHER CALMODULIN-BINDING PROTEIN 60 B 7 641 - -
Bpe13g01208 643 MobiDBLite consensus disorder prediction 10 28 - -
Bpe13g01208 643 Pfam Calmodulin binding protein C-terminal domain 326 388 IPR046829 -
Bpe13g01208 643 MobiDBLite consensus disorder prediction 1 28 - -
Bpe13g01208 643 Pfam Calmodulin binding protein-like N-terminal domain 96 243 IPR046831 -
Bpe13g01208 643 Pfam Calmodulin binding protein central domain 256 321 IPR046830 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g02048 Bpe13g01208 CCT
Bpe02g02092 Bpe13g01208 CCT
Bpe01g00514 Bpe13g01208 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01832 Bpe-Chr2:20476937 Bpe13g01208 Bpe-Chr13:17426729 1.32E-73 dispersed
Bpe12g00581 Bpe-Chr12:11587717 Bpe13g01208 Bpe-Chr13:17426729 1.10E-93 dispersed
Bpe13g00259 Bpe-Chr13:10548626 Bpe13g01208 Bpe-Chr13:17426729 6.14E-42 dispersed
Bpe13g01135 Bpe-Chr13:16884080 Bpe13g01208 Bpe-Chr13:17426729 2.23E-07 dispersed
Bpe13g01208 Bpe-Chr13:17426729 Bpe15g00529 Bpe-Chr15:16449076 8.85E-99 dispersed
Bpe13g01208 Bpe-Chr13:17426729 Bpe02g02147 Bpe-Chr2:22790159 1.07E-113 wgd
Bpe13g01208 Bpe-Chr13:17426729 Bpe02g02092 Bpe-Chr2:22396177 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g01208 - - cmo:103494282 989.178