Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g01228 ATGACGTTGAGGAAGACGAGTTGTGGATCTGTTTTCTCGATCAGCTGTTACAGAGGAGAGTCTCAGAAGAAGACGAAGAGAGTTGCGGCGGCGAAGGAGGCTTCATTCAAGAGGATTCCGACATTGGATTGGAGCAATCCGAGCTCTGCTCTCTCAGAGGATCTCTCTCTTTCTCTCTCTGGGTTTGATATTCAGGTATTCACCCTGGCAGAGCTGACGGCGATTACCCAGAATTTCTCATCGGCTAACTTTCTCGGAGAAGGTGGGTTCGGACCGGTGCTTAAAGGGTTCGTCGATGATAAGCTCCGCCCTGGATTGGCGGCCCAGCCTGTAGCGGTTAAGCTCCTGGATTTGGATGGGTTTCAAGGCCATCGGGAGTGGCTTACGGAAGTAATTTTTCTCGGCCAATTGAGGCATCCACACCTGGTAAAGCTGATCGGATATTGCTGCGAGGAAGAACACAGACTACTCGTTTATGAATACATGCCAAGAGGCAGCCTTGAAAATCAACTGTTTGGAAAATACTCCATCGCACTGCCATGGTCGACGAGAATGAAGATCGTTCTCGGAGCAGCAAAGGGCCTCGCCTTTCTTCACGAAGCACAAAAACCAGTCATATACAGAGATTTCAAAGCTTCAAACGTTTTGATAGACTCTGACTACGCAGCTAAACTGTCGGATTTTGGGTTGGCGAAAAACGGTCCGGAAGGAGATGACACCCACGTCTCCACTCGAGTCATGGGTACCAACGGCTATGCAGCTCCAGAATATATAATGACCGGGCATTTGACGGCGAAGAGCGACGTGTACAGCTTCGGAGTGGTGCTGTTAGAGTTGCTGACTGGGAGGAGGTCGGTGGACAAGAGCCGTCCTCCGAGAGAGCAGAGCTTGACGGAGTGGGCGAGGCCCATGTTGAAAGACCCGAGGAAGCTGAGCAGGGTGATGGACCAGAGGCTGGAGGGGATGTACTCGGAAACGGGCGCGAGAAAGGCGGCGGCTTTGGCCTATGATTGCCTGTGCCAGCGGCCGAAGCAGAGGCCGACGATGACGGAGGTGAAGGGGGTTCTGGAGGAGCTGCAGAATTTCGACGATGTTCCTGTTGGGCAGTTTGTGTTCGAGGTTTCGACGAAGATGGAAGTGCAAGTGTAA 1149 52.39 MTLRKTSCGSVFSISCYRGESQKKTKRVAAAKEASFKRIPTLDWSNPSSALSEDLSLSLSGFDIQVFTLAELTAITQNFSSANFLGEGGFGPVLKGFVDDKLRPGLAAQPVAVKLLDLDGFQGHREWLTEVIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFGKYSIALPWSTRMKIVLGAAKGLAFLHEAQKPVIYRDFKASNVLIDSDYAAKLSDFGLAKNGPEGDDTHVSTRVMGTNGYAAPEYIMTGHLTAKSDVYSFGVVLLELLTGRRSVDKSRPPREQSLTEWARPMLKDPRKLSRVMDQRLEGMYSETGARKAAALAYDCLCQRPKQRPTMTEVKGVLEELQNFDDVPVGQFVFEVSTKMEVQV 382
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 17567005 17568455 - Bpe010896.1 Bpe13g01228 114008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g01228 382 ProSiteProfiles Protein kinase domain profile. 79 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe13g01228 382 Gene3D Transferase(Phosphotransferase) domain 1 162 369 - -
Bpe13g01228 382 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Bpe13g01228 382 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Bpe13g01228 382 Gene3D Phosphorylase Kinase; domain 1 56 161 - -
Bpe13g01228 382 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 25 376 - -
Bpe13g01228 382 SUPERFAMILY Protein kinase-like (PK-like) 57 358 IPR011009 -
Bpe13g01228 382 PANTHER OS01G0588500 PROTEIN-RELATED 25 376 - -
Bpe13g01228 382 Pfam Protein tyrosine and serine/threonine kinase 83 353 IPR001245 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe01g00618 Bpe13g01228 CCT
Bpe01g00618 Bpe13g01228 ECH
Bpe08g00550 Bpe13g01228 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe13g01228 Bpe-Chr13:17567005 Bpe13g01432 Bpe-Chr13:19594519 1.58E-135 dispersed
Bpe01g00618 Bpe-Chr1:4079956 Bpe13g01228 Bpe-Chr13:17567005 0 wgd
Bpe13g01228 Bpe-Chr13:17567005 Bpe08g00550 Bpe-Chr8:3824826 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63686 PF07714 PK_Tyr_Ser-Thr 6.70E-45 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g01228 - - zju:107423923 577.785