Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g01232 ATGAGCGGAAAAAGTAGGTTTCCTTTCACCGCCCTTCAATGGCAAGAGCTTGAACACCAAGCTCTAATCTTCAAGTACATGATTTCAGGAATACCCATTCCGCCTGATCTCCTTTTCAGCATTAAAAGAAGCTCCTTTGACTCTCCAGACGGTAGGTTTTTCGTCTCTCTGACTGTTTTAATGGTGTTTTGTGGGTTTGTGGGTTCAGGTGGGTGGAGTTATTCACCAATGGGAATGAGGAAAATAGACCCAGAGCCTGGAAGATGCAAAAGAACAGATGGAAAAAAATGGCGGTGCTCGAAAGAAGCTTACCCAGATTCGAAGTACTGCGAAAGACACATGCATAGAGGCAAAAATCGTTCAAGAAAGCCTGTGGAAGTTTTCAAATCAACACCTGCTTTAAACTCGACGCCATTAACGCCGGCGATCTCTTCTCTCTCTAAGATTTCACCTCCTCTCTCCTCATTCTCCCATTCTCTCTCTCCTTACAACTCTCATCTTCTTCCCCCTTCCTATCATCTTTCTCCTTCACGGCCATCCGCTTCCCCTCTTTTAGATTCTGGGTTTTACTCCAATGCCGATCACAGGTATTTTCATGGGATGAAAGAGGAGGTGGACGAGCATCCTTTCTTCTCAGAAGCTCCAACCGGCGCCATTAGAGACTTCTCCGCTTCTGGTTTGGATGAGTACTGGCAACCGAAACCTTCAACGATGAGTTGCTCGTCTTCTTCCTCGAAAGACAGCAGTTTCTCTCTCTTGCAGAGCGATTACTCCAGTTTGCAGCTACAGAGCCTGGACGATTCCATGAAGAACAACAAAGATGAACGCAGTATTCCATTGGGTAAACGTGAAATGTCCATTCCGACGGAGAGAGAAACGCCGCAGAAGACTGTTCACCGCTTCTTCGACGAGTGGCCGCCGAGAGACCGAGAATCATGGCTGGATTTGGACGGAAAATCATCCAACTCCGGTTTGATTGCCTCATCCAAGCTCTTCCCCCAACACCCCTGA 1011 47.28 MSGKSRFPFTALQWQELEHQALIFKYMISGIPIPPDLLFSIKRSSFDSPDGRFFVSLTVLMVFCGFVGSGGWSYSPMGMRKIDPEPGRCKRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVFKSTPALNSTPLTPAISSLSKISPPLSSFSHSLSPYNSHLLPPSYHLSPSRPSASPLLDSGFYSNADHRYFHGMKEEVDEHPFFSEAPTGAIRDFSASGLDEYWQPKPSTMSCSSSSSKDSSFSLLQSDYSSLQLQSLDDSMKNNKDERSIPLGKREMSIPTERETPQKTVHRFFDEWPPRDRESWLDLDGKSSNSGLIASSKLFPQHP 336
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 17596724 17597835 + Bpe010900.1 Bpe13g01232 114012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g01232 336 PANTHER GROWTH-REGULATING FACTOR 6 5 322 - -
Bpe13g01232 336 MobiDBLite consensus disorder prediction 268 316 - -
Bpe13g01232 336 ProSiteProfiles WRC domain profile. 83 127 IPR014977 -
Bpe13g01232 336 PANTHER - 5 322 IPR031137 GO:0005634|GO:0006351|GO:0032502
Bpe13g01232 336 Pfam WRC 84 126 IPR014977 -
Bpe13g01232 336 Pfam QLQ 8 41 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bpe13g01232 336 SMART QLQ_2 7 43 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bpe13g01232 336 MobiDBLite consensus disorder prediction 263 336 - -
Bpe13g01232 336 ProSiteProfiles QLQ domain profile. 8 43 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe01g00613 Bpe13g01232 CCT
Bpe01g00613 Bpe13g01232 ECH
Bpe08g00542 Bpe13g01232 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g01093 Bpe-Chr7:16257057 Bpe13g01232 Bpe-Chr13:17596724 3.17E-64 dispersed
Bpe12g00610 Bpe-Chr12:11815549 Bpe13g01232 Bpe-Chr13:17596724 6.47E-60 dispersed
Bpe13g01232 Bpe-Chr13:17596724 Bpe04g00144 Bpe-Chr4:965595 3.49E-35 dispersed
Bpe01g00613 Bpe-Chr1:4050465 Bpe13g01232 Bpe-Chr13:17596724 1.85E-93 wgd
Bpe13g01232 Bpe-Chr13:17596724 Bpe08g00542 Bpe-Chr8:3704465 1.60E-84 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22363 PF08879 WRC 1.10E-20 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g01232 - - dzi:111284577 305.834