Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g01246 ATGTATTTCTGCAGAACTAATAGTGGTACATTCATGGACGGTGATCTTCTCATCAATCGGGAGGGAGTTCAAATTGTCTGTCAGGTTCAGAAAGAAGCTAAAAATTCATGTCAACTCAACCCCTCAGACAGCCAGTGGAGTTTGGAAGACCTGGATACAGTTAAAGTCATCGGAAAAGGAAACGGCGGAGTTGTTCAGTTGGTGAAGCACAAAGCCACCGGCCAGTTTTTCGCATTGAAGGTTATTCAAATGAAGATCGAGGAGAGTTATCGGAAACAGATAGCGAGTGAACTGAAAATTAATCAGTCAGCTCGAAGCCCATATGTGGTGGTCTGTTATCAGTCTTTCTACTACAATGGAGCCATTTCAATTATCTTAGAGTACATGGATGGAGGGAGTCTAGCAGATTTTCTGAAACAAGTTAAGTCGATTCCTGAGGAATATCTTGCTGCAATATGTAAACAGGTGCTGAGGGGACTTTTGTACCTTCACCATGAAATGCACGTAATTCACAGGGACTTGAAGCCTTCAAATCTGCTAATAAATCACAAAGGAGAAGTCAAGATTAGTGATTTTGGTGTGAGCAGAATAATGGCAAGCACCTCTGGACAGGCAAATACCTTTGTTGGAACATACAACTACATGTCTCCAGAGAGGATTGGAGGAGAGAGATATGACAAGAAAAGTGATATTTGGAGTTTGGGACTGGTTTTACTGGAGTGTGCAATTGGACAGTTTCCTTATTCTCCACCAGAGGAAGGTGGAAGCTTGGATAACTTCTTTGATATTATGCAAGTCATTGTTAATGGACCTCCTCCTTCTGCTCCTTCTTCCGGATTTTCTCCGCAGTTCTGCTCCTTCATTTCCGATTGCTTAGAAAAAGAACCGAAAGACAGACTCTCGGCTCGTGAGCTCATGGTGCATCCTTTTGTGAATGCATATGAAGACTTGGATGTGGATCTATCATCATACTTCGCAGGCGCTGGATCGCCATTTCCACCCTCTTAG 1008 42.96 MYFCRTNSGTFMDGDLLINREGVQIVCQVQKEAKNSCQLNPSDSQWSLEDLDTVKVIGKGNGGVVQLVKHKATGQFFALKVIQMKIEESYRKQIASELKINQSARSPYVVVCYQSFYYNGAISIILEYMDGGSLADFLKQVKSIPEEYLAAICKQVLRGLLYLHHEMHVIHRDLKPSNLLINHKGEVKISDFGVSRIMASTSGQANTFVGTYNYMSPERIGGERYDKKSDIWSLGLVLLECAIGQFPYSPPEEGGSLDNFFDIMQVIVNGPPPSAPSSGFSPQFCSFISDCLEKEPKDRLSARELMVHPFVNAYEDLDVDLSSYFAGAGSPFPPS 335
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 17706733 17709730 + Bpe010911.1 Bpe13g01246 114026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g01246 335 Gene3D Transferase(Phosphotransferase) domain 1 131 329 - -
Bpe13g01246 335 ProSiteProfiles Protein kinase domain profile. 51 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe13g01246 335 Pfam Protein kinase domain 53 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe13g01246 335 SUPERFAMILY Protein kinase-like (PK-like) 42 315 IPR011009 -
Bpe13g01246 335 ProSitePatterns Protein kinases ATP-binding region signature. 57 80 IPR017441 GO:0005524
Bpe13g01246 335 CDD PKc_MAPKK_plant_like 49 315 - -
Bpe13g01246 335 Gene3D Phosphorylase Kinase; domain 1 21 130 - -
Bpe13g01246 335 PANTHER MAP KINASE KINASE 5 330 - -
Bpe13g01246 335 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Bpe13g01246 335 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 5 330 - -
Bpe13g01246 335 SMART serkin_6 51 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe01g00601 Bpe13g01246 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g02226 Bpe-Chr2:23279875 Bpe13g01246 Bpe-Chr13:17706733 1.09E-140 dispersed
Bpe03g00025 Bpe-Chr3:459401 Bpe13g01246 Bpe-Chr13:17706733 1.44E-72 dispersed
Bpe13g01246 Bpe-Chr13:17706733 Bpe11g00463 Bpe-Chr11:3584914 2.03E-41 dispersed
Bpe01g00601 Bpe-Chr1:3948403 Bpe13g01246 Bpe-Chr13:17706733 1.61E-180 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63687 PF00069 Pkinase 9.10E-71 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g01246 K20603 - jre:109009962 488.419