Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe13g01246 | ATGTATTTCTGCAGAACTAATAGTGGTACATTCATGGACGGTGATCTTCTCATCAATCGGGAGGGAGTTCAAATTGTCTGTCAGGTTCAGAAAGAAGCTAAAAATTCATGTCAACTCAACCCCTCAGACAGCCAGTGGAGTTTGGAAGACCTGGATACAGTTAAAGTCATCGGAAAAGGAAACGGCGGAGTTGTTCAGTTGGTGAAGCACAAAGCCACCGGCCAGTTTTTCGCATTGAAGGTTATTCAAATGAAGATCGAGGAGAGTTATCGGAAACAGATAGCGAGTGAACTGAAAATTAATCAGTCAGCTCGAAGCCCATATGTGGTGGTCTGTTATCAGTCTTTCTACTACAATGGAGCCATTTCAATTATCTTAGAGTACATGGATGGAGGGAGTCTAGCAGATTTTCTGAAACAAGTTAAGTCGATTCCTGAGGAATATCTTGCTGCAATATGTAAACAGGTGCTGAGGGGACTTTTGTACCTTCACCATGAAATGCACGTAATTCACAGGGACTTGAAGCCTTCAAATCTGCTAATAAATCACAAAGGAGAAGTCAAGATTAGTGATTTTGGTGTGAGCAGAATAATGGCAAGCACCTCTGGACAGGCAAATACCTTTGTTGGAACATACAACTACATGTCTCCAGAGAGGATTGGAGGAGAGAGATATGACAAGAAAAGTGATATTTGGAGTTTGGGACTGGTTTTACTGGAGTGTGCAATTGGACAGTTTCCTTATTCTCCACCAGAGGAAGGTGGAAGCTTGGATAACTTCTTTGATATTATGCAAGTCATTGTTAATGGACCTCCTCCTTCTGCTCCTTCTTCCGGATTTTCTCCGCAGTTCTGCTCCTTCATTTCCGATTGCTTAGAAAAAGAACCGAAAGACAGACTCTCGGCTCGTGAGCTCATGGTGCATCCTTTTGTGAATGCATATGAAGACTTGGATGTGGATCTATCATCATACTTCGCAGGCGCTGGATCGCCATTTCCACCCTCTTAG | 1008 | 42.96 | MYFCRTNSGTFMDGDLLINREGVQIVCQVQKEAKNSCQLNPSDSQWSLEDLDTVKVIGKGNGGVVQLVKHKATGQFFALKVIQMKIEESYRKQIASELKINQSARSPYVVVCYQSFYYNGAISIILEYMDGGSLADFLKQVKSIPEEYLAAICKQVLRGLLYLHHEMHVIHRDLKPSNLLINHKGEVKISDFGVSRIMASTSGQANTFVGTYNYMSPERIGGERYDKKSDIWSLGLVLLECAIGQFPYSPPEEGGSLDNFFDIMQVIVNGPPPSAPSSGFSPQFCSFISDCLEKEPKDRLSARELMVHPFVNAYEDLDVDLSSYFAGAGSPFPPS | 335 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 17706733 | 17709730 | + | Bpe010911.1 | Bpe13g01246 | 114026 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe13g01246 | 335 | Gene3D | Transferase(Phosphotransferase) domain 1 | 131 | 329 | - | - | |
Bpe13g01246 | 335 | ProSiteProfiles | Protein kinase domain profile. | 51 | 311 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe13g01246 | 335 | Pfam | Protein kinase domain | 53 | 311 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe13g01246 | 335 | SUPERFAMILY | Protein kinase-like (PK-like) | 42 | 315 | IPR011009 | - | |
Bpe13g01246 | 335 | ProSitePatterns | Protein kinases ATP-binding region signature. | 57 | 80 | IPR017441 | GO:0005524 | |
Bpe13g01246 | 335 | CDD | PKc_MAPKK_plant_like | 49 | 315 | - | - | |
Bpe13g01246 | 335 | Gene3D | Phosphorylase Kinase; domain 1 | 21 | 130 | - | - | |
Bpe13g01246 | 335 | PANTHER | MAP KINASE KINASE | 5 | 330 | - | - | |
Bpe13g01246 | 335 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 169 | 181 | IPR008271 | GO:0004672|GO:0006468 | |
Bpe13g01246 | 335 | PANTHER | MITOGEN-ACTIVATED KINASE KINASE KINASE | 5 | 330 | - | - | |
Bpe13g01246 | 335 | SMART | serkin_6 | 51 | 311 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe01g00601 | Bpe13g01246 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe02g02226 | Bpe-Chr2:23279875 | Bpe13g01246 | Bpe-Chr13:17706733 | 1.09E-140 | dispersed | |
Bpe03g00025 | Bpe-Chr3:459401 | Bpe13g01246 | Bpe-Chr13:17706733 | 1.44E-72 | dispersed | |
Bpe13g01246 | Bpe-Chr13:17706733 | Bpe11g00463 | Bpe-Chr11:3584914 | 2.03E-41 | dispersed | |
Bpe01g00601 | Bpe-Chr1:3948403 | Bpe13g01246 | Bpe-Chr13:17706733 | 1.61E-180 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
63687 | PF00069 | Pkinase | 9.10E-71 | CL0016 | Bpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe13g01246 | K20603 | - | jre:109009962 | 488.419 |