Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g01247 ATGAGCGACCCCGGTGATTTTTCAGCTACGGCAGTTAAGACAGTTATGGTGGCAGTTAACGGCGTTCCCGGCCGTAGCAGTGGCGGTGGAAGCCGACGCGCCGTCCAATGGACCGTGGAGAATCTCTTGCCTGGAGCTGGTCGTCTCCTCTTAGTTCATGTCATGCCCAAAATTACTTCGATTCCCACACCATTGGGAGATGGAGTCCCCGTTTCGGCTCTTGATGCGAACTTGGTTGCTCTTTATACGCACGACATGAAAGAGAAATTCGATCAAATTTTTGTCCCGTTTAAGAAGCTTTGCAGGAAAAACAAAGTTGAAACTTTGGTGCTTGAAGATGACAACCCAGCTACAGCGCTTGTAAGATATATATCTGAGTCTGATATCAAAACATTGGTGTTGGGTTCTTGTTCTTCAAATTTCATGACAAGGAAGCTTAAAGGACCTGGAGTACCAACGACAGTTCTGAGAAATGCTCCAAATAGTTGTAATATCTACATTATATCAAAGCGTAGAATCATTAAAAGAACAACAAGTTCCTCGCCAACCAGTGAGATTGATTCTCAACAGTGCATACCGAGTGAAAGTAACTACGAAGTAGGTGCTGATAGTTTCTGTTCTTCATCTGCGGAACCAGAAGGCTGTAACAGAACTGTATATTCAGAAAGGATTCATGATGACTTGGAAAACAAACGAGAGATTGATTCAAGTAAATTAGATTTTGCAGCCTCCGAAACTGAGCAGGTAGATATGCAGCGTGAGATTGAGTCACTGCAGCTAGATTTAGAAAACACTGTTGCCATGTATAAACGTGCTTGTGAAGAACTGGTCCATACCCAGAGTAAGGTGGAGTCACTTTCCTCTGAATGCCATGAGGAAACAAAAAGAGTGAAATCTGCCATGGAAAGAGAAGAAGATTTGAGGAAAATTGCAGCCGAAGAAAAAGCTAAGCATTTAGAAGCCATGAAGGCACTAGAGGAAGCAAAAGCTTTACTGGCTAAAGGGGCATATGAAAGGCAGTTGGCCGAACAGAATGCCGTAAAAGTATCCTTGGAAAAGCAAAGAATTGTTGATGCACTAATCTCTTCTGATAAAAGGTACAGAAGGTATACGGGGGAGGAAATGGAAATTGCAACGGATTTCTTCAACGTGAGTAATATGATTGGTCAGGGAGGATATGGGAAGGTTTATAAATGCTATCTTGATGGTACACTAGTGGCTGTAAAGGTTCTTCAACCTGGTGAATTTGACAAGAAAAATGAGTTTCTGAAAGAGATTGAAGTTTTAAGCCAAATACGGCATCCACACGTGGTTTTACTCCTTGGAGCTTGTCCAGAGAGAGGTTGTCTGGTATATGAATTCTTGGAAAATGGAAGTCTGGACGAGTATATCTTGCAGCAGAGGAGGAAACCACCACTGCCATGGCTTGTTAGATTCAGGATAATTCATCAAGTAGCTTGTGGACTTTCTTTCTTACACAACTCAAAGCCAGAACCCATAATACATCGAGATTTAAAGCCGAGCAATATCTTGTTGGACAGAAACTATGTTGTCAAAATTGCAGATGTTGGACTGGCTAAAATCACTGGAGAGATAGTGCCTGATAATATAACAGAATATAAATGTTCTATTATATTTGGTACACTTCACTACATGGACCCCGAGTATCAGAGAACTGGCACGGTTCGTCCAAAATCTGATTTATATGCTTTTGGTGTAATAGTTCTCCAAATGTTGACAGCCCGTCGTCCTCACGGCTTAATTTCAGCGGTAGAGAATGCTATTTCAAGTGGGTCCTTGGCAGATATTTTAGATAAGTCAGTTTCAGATTGGCCTCTTTCTGAAACAGAAGAATTGGCGAAAATTGCTTTGGGATGCACAAAGCTTAGATGCAGGGATCGGCCTGATTTGGACGCAGAGGTTATGCCAATCCTCAATACAATTTTGAACGTTGTTGAGTTTAGTCAGAAAATTCTCAGCAACCCTGGATTTGTCCCAAGCCACTACCTCTGTCCAATCCTTCAGGAAGTAATGGAAGAGCCACACATTGCTGCCGACGGGTTTACCTATGAATACGAGGCGATAAAGGCGTGGCTGGATAGACATGAAGTATCACCAGTGACAAAGCTTAGACTTCAGCATTCTATGGTAACACCAAATCGCACTTTAAGATCTGCCATACAAGAATGGAAGTCATCTTTGAAACTTCCCTACGCTCAGTTTGGATAA 2229 42.31 MSDPGDFSATAVKTVMVAVNGVPGRSSGGGSRRAVQWTVENLLPGAGRLLLVHVMPKITSIPTPLGDGVPVSALDANLVALYTHDMKEKFDQIFVPFKKLCRKNKVETLVLEDDNPATALVRYISESDIKTLVLGSCSSNFMTRKLKGPGVPTTVLRNAPNSCNIYIISKRRIIKRTTSSSPTSEIDSQQCIPSESNYEVGADSFCSSSAEPEGCNRTVYSERIHDDLENKREIDSSKLDFAASETEQVDMQREIESLQLDLENTVAMYKRACEELVHTQSKVESLSSECHEETKRVKSAMEREEDLRKIAAEEKAKHLEAMKALEEAKALLAKGAYERQLAEQNAVKVSLEKQRIVDALISSDKRYRRYTGEEMEIATDFFNVSNMIGQGGYGKVYKCYLDGTLVAVKVLQPGEFDKKNEFLKEIEVLSQIRHPHVVLLLGACPERGCLVYEFLENGSLDEYILQQRRKPPLPWLVRFRIIHQVACGLSFLHNSKPEPIIHRDLKPSNILLDRNYVVKIADVGLAKITGEIVPDNITEYKCSIIFGTLHYMDPEYQRTGTVRPKSDLYAFGVIVLQMLTARRPHGLISAVENAISSGSLADILDKSVSDWPLSETEELAKIALGCTKLRCRDRPDLDAEVMPILNTILNVVEFSQKILSNPGFVPSHYLCPILQEVMEEPHIAADGFTYEYEAIKAWLDRHEVSPVTKLRLQHSMVTPNRTLRSAIQEWKSSLKLPYAQFG 742
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 17717128 17721168 - Bpe010913.1 Bpe13g01247 114027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g01247 742 Coils Coil 308 329 - -
Bpe13g01247 742 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 34 218 733 - -
Bpe13g01247 742 SUPERFAMILY Protein kinase-like (PK-like) 365 637 IPR011009 -
Bpe13g01247 742 SUPERFAMILY RING/U-box 661 735 - -
Bpe13g01247 742 SMART Ubox_2 668 730 IPR003613 GO:0004842|GO:0016567
Bpe13g01247 742 ProSitePatterns Protein kinases ATP-binding region signature. 388 409 IPR017441 GO:0005524
Bpe13g01247 742 Pfam Protein tyrosine and serine/threonine kinase 384 638 IPR001245 GO:0004672|GO:0006468
Bpe13g01247 742 Gene3D Transferase(Phosphotransferase) domain 1 455 658 - -
Bpe13g01247 742 PANTHER OS02G0152300 PROTEIN 218 733 - -
Bpe13g01247 742 PANTHER OS02G0152300 PROTEIN 14 199 - -
Bpe13g01247 742 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 13 160 - -
Bpe13g01247 742 ProSiteProfiles Protein kinase domain profile. 382 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe13g01247 742 Gene3D HUPs 10 178 IPR014729 -
Bpe13g01247 742 Pfam U-box domain 665 732 IPR003613 GO:0004842|GO:0016567
Bpe13g01247 742 Coils Coil 283 303 - -
Bpe13g01247 742 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 664 736 IPR013083 -
Bpe13g01247 742 Coils Coil 334 354 - -
Bpe13g01247 742 ProSitePatterns Serine/Threonine protein kinases active-site signature. 500 512 IPR008271 GO:0004672|GO:0006468
Bpe13g01247 742 CDD STK_N 14 170 - -
Bpe13g01247 742 CDD RING-Ubox_WDSUB1_like 669 709 - -
Bpe13g01247 742 Gene3D Phosphorylase Kinase; domain 1 353 454 - -
Bpe13g01247 742 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 34 14 199 - -
Bpe13g01247 742 ProSiteProfiles U-box domain profile. 664 737 IPR003613 GO:0004842|GO:0016567
Bpe13g01247 742 SMART serkin_6 382 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe01g00726 Bpe13g01247 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00105 Bpe-Chr8:565952 Bpe13g01247 Bpe-Chr13:17717128 1.62E-112 dispersed
Bpe13g00949 Bpe-Chr13:15382239 Bpe13g01247 Bpe-Chr13:17717128 4.19E-99 dispersed
Bpe13g01247 Bpe-Chr13:17717128 Bpe14g00270 Bpe-Chr14:2763014 1.27E-10 dispersed
Bpe13g01247 Bpe-Chr13:17717128 Bpe07g00994 Bpe-Chr7:15631047 3.64E-155 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63688 PF07714 PK_Tyr_Ser-Thr 8.70E-42 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g01247 - - cpep:111805862 875.93