Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g01287 ATGGCTGACTCGTTCAACTCGTCTTCTTCGCCCGGACCCGACCCGAAGAAGGGTAAGCGAGCCCGGGAAAGTGACGGCAAGCACCCGGTTTACAGAGGGGTGCGAATGCGGGCTTGGGGAAAATGGGTATCCGAAATCCGGGAACCGAGAAAGAAGAACCGGATATGGCTCGGAACCTTTTCCACGCCGGATATGGCGGCTCGAGCTCACGACGTCGCCGCTTTGACAATCAAAGGCAAATCCGCTATTCTCAACTTCCCGGAACTTGCTGGAATGCTTCCCCAACCGGCTTCGAACTCTCCCCGCGACGTTCAAGCCGCCGCTGCTTTGGCCGCTTCCATGGAGGTTCTTCCGGCTACTCCACCAGAATCATCACCGCCTCCACCGTCTGAACAGTCATCTTCTTCCTCCTCATTCGACATTCCTTCTCCGGAGGAACTCAGCGCCATCGTAGAGCTTCCGAGCTTAGGAACCAGCTACGAATCGCCCGGGTCAGAATTCGTGTTTCTGGACTCGCAAGATCGGTGGCTCTACGAAGAGGACTACGAATACTTCACCCATCAGATATCAGAGACGGAAACAGATAGCTTCCAATTTTTCTTGTGGCCCCATTAA 615 54.96 MADSFNSSSSPGPDPKKGKRARESDGKHPVYRGVRMRAWGKWVSEIREPRKKNRIWLGTFSTPDMAARAHDVAALTIKGKSAILNFPELAGMLPQPASNSPRDVQAAAALAASMEVLPATPPESSPPPPSEQSSSSSSFDIPSPEELSAIVELPSLGTSYESPGSEFVFLDSQDRWLYEEDYEYFTHQISETETDSFQFFLWPH 204
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 18029116 18029730 - Bpe010950.1 Bpe13g01287 114067
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g01287 204 PRINTS Ethylene responsive element binding protein signature 53 69 IPR001471 GO:0003700|GO:0006355
Bpe13g01287 204 PRINTS Ethylene responsive element binding protein signature 31 42 IPR001471 GO:0003700|GO:0006355
Bpe13g01287 204 ProSiteProfiles AP2/ERF domain profile. 30 87 IPR001471 GO:0003700|GO:0006355
Bpe13g01287 204 Gene3D AP2/ERF domain 30 88 IPR036955 GO:0003700|GO:0006355
Bpe13g01287 204 MobiDBLite consensus disorder prediction 96 143 - -
Bpe13g01287 204 MobiDBLite consensus disorder prediction 15 29 - -
Bpe13g01287 204 SUPERFAMILY DNA-binding domain 30 88 IPR016177 GO:0003677
Bpe13g01287 204 Pfam AP2 domain 29 79 IPR001471 GO:0003700|GO:0006355
Bpe13g01287 204 SMART rav1_2 30 93 IPR001471 GO:0003700|GO:0006355
Bpe13g01287 204 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 8 188 - -
Bpe13g01287 204 CDD AP2 31 89 IPR001471 GO:0003700|GO:0006355
Bpe13g01287 204 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-LIKE 8 188 - -
Bpe13g01287 204 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g02242 Bpe-Chr2:23393593 Bpe13g01287 Bpe-Chr13:18029116 6.16E-96 dispersed
Bpe13g01287 Bpe-Chr13:18029116 Bpe14g00516 Bpe-Chr14:4538438 4.93E-57 dispersed
Bpe01g00552 Bpe-Chr1:3582125 Bpe13g01287 Bpe-Chr13:18029116 2.81E-63 wgd
Bpe13g01287 Bpe-Chr13:18029116 Bpe02g02241 Bpe-Chr2:23387605 2.14E-97 wgd
Bpe13g01287 Bpe-Chr13:18029116 Bpe08g00494 Bpe-Chr8:3241344 1.85E-62 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22369 PF00847 AP2 9.90E-13 CL0081 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g01287 K09286 - tcc:18588535 234.572