Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bpe13g01292 | AATTTGAATTTGATGGGGGAAGGAGAGGTGGATGATTCTGCCCCAGAAAATTCTCAGCCAGATTTTGCGGCATCAAGTGACGCTGCTTCGTCAGATATCCCAGCTAAGAAGCTCGCGAGGCAGCTGGATTTTACGGGCTTTGGAAGGATGGCAGCGAGTGTGGTCCTGCCGGAACATCCCCACCCTCAATCTCAAACACAATTGCAGTCGCGCTCGCAGTTGCCACTCGTGGCGGTGCCTCAGAGCCAGGCTCAATTGCCCCCGACGCCTCAAAAACCAGATTCCCCTAAGTCAAGAGCAAGATCCAACATCGAAGCAAAAGATTGTACTCCGAAGAAGCAAAAACAGTGTAATTGTAAACACTCCCGATGCTTAAAGTTGTATTGTGAGTGCTTTGCTTCTGGAATATACTGCGACGGTTGTAACTGCATAAACTGCTATAATAATGTTGAAAATGAAGCTGCCAGGAGAGAAGCAGTTGAAGCGACTCTGGAACGTAATCCAAATGCATTTCGACCAAAAATTGCTAACAGTCCGCATGGGACACGTGAGAATAGAGAGGAGGCTGGGGAGGTTCTAATGTTGGGAAAGCACAACAAAGGCTGCCATTGCAAGAAATCAGGGTGCCTAAAAAAGTATTGTGAGTGTTTCCAAGCCAATATTCTCTGCTCTGAAAACTGTAAATGCATGGACTGCAAAAACTTTGAGGGAAGTGAAGAGAGACAAGCTCTATTCCACGGGGACCATGGGAACAATATTGCATACATACAGCAGGCAGCTAATGCTGCCATAACTGGAGCTATTGGATCCTCTGGATATGCACCCCCGCCAGTGTCAAAGAAAAGAAAAGGACAAGAGCTTCTTTTTGGCCACACACCCAAAGATCCAGCCATTCATCGGCTGGCACAATTTCAACAGGAAAATCAAATTAGAACTTCTATAGCTTCCTTGCCTTCAATCCCTGCTACTCGTGCAGGTTCCAATGCGGCATTGAGCCCTTCAATGTTCACTTACAGATCGTTGTTAGCAGACATCATCCAACCACAGGATTTGAAGGAGCTTTGCTCTGTGTTAGTCGTTCTATCTAATCAAAGGAACGCTGCAGAAAGAGTGGCAGACAATCAAATAGAAACTTCCCTTGCTTCCTCAACTCATGACAGGCTGCAGAATGAAAAGGATTCTGCTGAGAAAGCTATCGATGGTGATTGTTCAAGCGCAAACCAGGATACTATAATCAAGCCCAATAATTCCAATTCAGGAGAAGCCATTGTACCAAAAGGACGGCCTATGTCTCCCGGAACTTTAGCTTTGATGTGCGATGAAGAAGACACAATGTTTATTCAATCTGCTTTCCCCAATGGGATAGTTGGTAATAGTTGCTCTACGTCGTCACAAATGCCTTACGAACAAGACCTTTCGGAAGTCTATGCAGAACAGGAACGAACTGTCTTGACAAAGTTTCGAGATTGTCTCAATAGGCTCATAACTTTCGGCAAGATAAAAGGCAAGTTATTAATTTCTGATCTTGGTAAGTTAATAATTGATACTTGTAGTTATAACAGATATCTTTTGGGGGCTAATTTTATACAGTTTCTCCACTGGTTGTCTTTCTTTTGTTGTTATTTTCGTAATAAATTTCCCCGTGTGAGGTACAAATGA | 1659 | 44.06 | NLNLMGEGEVDDSAPENSQPDFAASSDAASSDIPAKKLARQLDFTGFGRMAASVVLPEHPHPQSQTQLQSRSQLPLVAVPQSQAQLPPTPQKPDSPKSRARSNIEAKDCTPKKQKQCNCKHSRCLKLYCECFASGIYCDGCNCINCYNNVENEAARREAVEATLERNPNAFRPKIANSPHGTRENREEAGEVLMLGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDHGNNIAYIQQAANAAITGAIGSSGYAPPPVSKKRKGQELLFGHTPKDPAIHRLAQFQQENQIRTSIASLPSIPATRAGSNAALSPSMFTYRSLLADIIQPQDLKELCSVLVVLSNQRNAAERVADNQIETSLASSTHDRLQNEKDSAEKAIDGDCSSANQDTIIKPNNSNSGEAIVPKGRPMSPGTLALMCDEEDTMFIQSAFPNGIVGNSCSTSSQMPYEQDLSEVYAEQERTVLTKFRDCLNRLITFGKIKGKLLISDLGKLIIDTCSYNRYLLGANFIQFLHWLSFFCCYFRNKFPRVRYK | 552 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 13 | 18074680 | 18079047 | + | Bpe010955.1 | Bpe13g01292 | 114072 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bpe13g01292 | 552 | MobiDBLite | consensus disorder prediction | 81 | 105 | - | - | |
| Bpe13g01292 | 552 | SMART | CXC_2 | 197 | 238 | IPR033467 | - | |
| Bpe13g01292 | 552 | SMART | CXC_2 | 112 | 152 | IPR033467 | - | |
| Bpe13g01292 | 552 | MobiDBLite | consensus disorder prediction | 398 | 426 | - | - | |
| Bpe13g01292 | 552 | PANTHER | TESMIN/TSO1-RELATED | 89 | 503 | IPR028307 | - | |
| Bpe13g01292 | 552 | PANTHER | PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 | 29 | 85 | - | - | |
| Bpe13g01292 | 552 | Pfam | Tesmin/TSO1-like CXC domain, cysteine-rich domain | 200 | 234 | IPR005172 | - | |
| Bpe13g01292 | 552 | Pfam | Tesmin/TSO1-like CXC domain, cysteine-rich domain | 114 | 149 | IPR005172 | - | |
| Bpe13g01292 | 552 | ProSiteProfiles | CRC domain profile. | 113 | 237 | IPR005172 | - | |
| Bpe13g01292 | 552 | MobiDBLite | consensus disorder prediction | 401 | 422 | - | - | |
| Bpe13g01292 | 552 | Coils | Coil | 147 | 167 | - | - | |
| Bpe13g01292 | 552 | PANTHER | PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 | 89 | 503 | - | - | |
| Bpe13g01292 | 552 | MobiDBLite | consensus disorder prediction | 1 | 34 | - | - | |
| Bpe13g01292 | 552 | PANTHER | TESMIN/TSO1-RELATED | 29 | 85 | IPR028307 | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Bpe02g02248 | Bpe13g01292 | CCT | |
| Bpe02g02248 | Bpe13g01292 | ECH |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bpe04g00820 | Bpe-Chr4:5411102 | Bpe13g01292 | Bpe-Chr13:18074680 | 6.54E-26 | dispersed | |
| Bpe13g00593 | Bpe-Chr13:13036806 | Bpe13g01292 | Bpe-Chr13:18074680 | 1.22E-23 | dispersed | |
| Bpe13g01292 | Bpe-Chr13:18074680 | Bpe14g01204 | Bpe-Chr14:8990438 | 3.00E-31 | dispersed | |
| Bpe13g01292 | Bpe-Chr13:18074680 | Bpe02g02248 | Bpe-Chr2:23422725 | 0 | wgd | |
| Bpe13g01292 | Bpe-Chr13:18074680 | Bpe03g00619 | Bpe-Chr3:26441838 | 1.64E-34 | wgd |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 22370 | PF03638 | TCR | 2.90E-12 | No_clan | Bpe | TF |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bpe13g01292 | - | - | zju:107431760 | 684.1 |