Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g01328 ATGAAGGAAGAAGATCATCCAAATTGTTCAGAAAAAGTTCAAACCATGCAAGGGTTGCAAGAGCAGTATCTAATTCAACATCATCAGCAGATTCTTCAACAGCAAGATCAAGAAAATAATGATATATATGGAGGAAGAGGAATGATTTTCCCTGAAGTTTCAACAGTTTTACAGCCATGGTCGTTGCCTCAAGTTCATCCCTTCAACCCTACCCAGTTAGGTCCGAACCCGGTTCGGGATCTCGACTCATTTCTATCCCCTCCTTCAAACTCTTATGTTAGTTTTTTCAATCGAAGAGCTCCTCTTCAGTTTGCATATGAAGTTCCGTCCTCAGATCACATGAGAATCATATCAAACTCCCTTGGACAACCGGTTCAGTCCGGTTCGGGACCTTTCGGTCTGCAAGCTGAACTGGGGAAGATGACGGCTCAAGAAATAATGGATGCTAAGGCTCTTGCTGCTTCTAAAAGCCACAGTGAAGCTGAGAGAAGAAGACGAGAGAGAATCAACAACCATCTTGCTAAATTGCGCAGCTTACTACCCAACACCACTAAAACAGATAAAGCTTCATTACTGGCTGAAGTAATACAACACGTCAAAGAACTTAAACGGCAGACTTCTGTGATAGCAGAAACAAATCCAGTTCCGACGGAAATGGACGAACTTACAGTCGATGCGTCTGACGAAGATGGTAAATTTATGATCAAAGCCTCTCTTTGTTGCGAGGATCGCTCTGATCTTTTGTCTGATCTTATAAAAACGTTAAAGTCATTGCGTTTAAAAACAATGAAAGCTGAAATTACAACGCTTGGGGGAAGAGTGAAGAATGTGTTGTTCGTCACCGGAGAAGAAGATTCAGGTAACGCCGTCGAGCAAACACAACAGCAGTACTGTATAAGTTCGATTCAAGAAGCTCTCAAGGCAGTGATGGAGAAGACGAGTGGAGATCATCACGAGTCTTCTTCTGGAAATGTTAAGAGGCAAAGAACAAACAGTATTAGTATCCTTTAA 1011 42.14 MKEEDHPNCSEKVQTMQGLQEQYLIQHHQQILQQQDQENNDIYGGRGMIFPEVSTVLQPWSLPQVHPFNPTQLGPNPVRDLDSFLSPPSNSYVSFFNRRAPLQFAYEVPSSDHMRIISNSLGQPVQSGSGPFGLQAELGKMTAQEIMDAKALAASKSHSEAERRRRERINNHLAKLRSLLPNTTKTDKASLLAEVIQHVKELKRQTSVIAETNPVPTEMDELTVDASDEDGKFMIKASLCCEDRSDLLSDLIKTLKSLRLKTMKAEITTLGGRVKNVLFVTGEEDSGNAVEQTQQQYCISSIQEALKAVMEKTSGDHHESSSGNVKRQRTNSISIL 336
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 18472475 18474296 + Bpe010990.1 Bpe13g01328 114108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g01328 336 Gene3D - 148 210 IPR036638 GO:0046983
Bpe13g01328 336 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 153 202 IPR011598 GO:0046983
Bpe13g01328 336 SMART finulus 159 208 IPR011598 GO:0046983
Bpe13g01328 336 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 157 211 IPR036638 GO:0046983
Bpe13g01328 336 PANTHER TRANSCRIPTION FACTOR BHLH30 73 336 IPR045847 GO:0003700|GO:0006355
Bpe13g01328 336 CDD bHLH_AtAIG1_like 148 226 - -
Bpe13g01328 336 PANTHER TRANSCRIPTION FACTOR BHLH30 73 336 - -
Bpe13g01328 336 MobiDBLite consensus disorder prediction 311 336 - -
Bpe13g01328 336 Pfam Helix-loop-helix DNA-binding domain 156 202 IPR011598 GO:0046983
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g02290 Bpe13g01328 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe10g00926 Bpe-Chr10:14860690 Bpe13g01328 Bpe-Chr13:18472475 1.97E-118 dispersed
Bpe13g01328 Bpe-Chr13:18472475 Bpe14g00487 Bpe-Chr14:4356039 3.27E-42 dispersed
Bpe13g01328 Bpe-Chr13:18472475 Bpe02g02290 Bpe-Chr2:23659959 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22376 PF00010 HLH 2.20E-12 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g01328 - - jre:108993280 456.447