Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g01332 ATGAATTATTCGGAGAAAATGCAGGAAATGGCCATGGAGATGGATTTCAAAAAGTATGTGGAGGCGTTAAAGGAAGAACGCCGGAAAATTACTGTTTTCCAGCGCGAGCTGCCGCTCTGTTTAGAGCTTATCACTCAAGCGATCGAGTCTTGTACGCAGCAGTTATCGGGGACGACGACGGAGTGTTTTAATGGAGGACTATCTGATTGCTCCGAGCAAACTTCCGGTGAATGCCCAGTGCTGGAGGAATTTATTCCGGTCAAAAAAGGTTTATCTTCAGAATTTTTGGATGAAGAGAGAGAATCTCTAAAAATGAGAAACGAGAACAAAAATAGCGAGAAGAAGCAAGTGGGTCAATCTGATTGGCTTAAATCTGCTCAGCTATGGAATCCAGATCCAGACGTTAAGGAGGATTTACCGAAGAAGACGACGGTTGTGGAGGTGAAGAAAAATGGCGGAGCTTTCCAGCCATTCCACAGAGAAAAAACCACCGGAAAAACAAACTCGCCCGTCGAAAATGGGCCGGCGGCGACTTTAATTTGTACGGCGGAAACAGCTTTCCAAAGCAGCACAAGACGAGAAGAGAAAGACGAACAGGGTAAAAGAAAGCTCCGGCGGTGCTGGTCGCCGGAGTTGCATCGCCGATTCTTGAGTGCCCTTCAACAGCTCGGCGGCTCACATGTGGCGACACCAAAGCAGATTAGGGAGCTAATGAAAGTGGATGGTCTGACTAACGATGAAGTTAAAAGCCATTTACAGAAATATCGTTTGCACACTAGAAGGTCAAGTCCTGTACACAACAATGGCGTCAAACAGTCACCGCAATATGTGGTAGTGGGTGGAATATGGGTGCCGCCGTCAGAATACTCAGTGGCGCCGGCGACATCCGTTGCCGGAGATGGCAACGAAGTCTACGTAGTTCCAACCACAGTTTCACAAGGTGGCCAAGGGTCGGCCATTAAAAGGCCACAGCCAAAGCGATTGGTTCAGTCTAGCACGGAAGGAAGAAGGATCAGCCACGGCGGAGAAGACGGGATAGAAGGCGGTCGTCATTCTAATTCTCCGGCGACGTCGTCTTCCACTCACACTTCCACAGCTTCCCCTGGGCTTTGA 1113 48.97 MNYSEKMQEMAMEMDFKKYVEALKEERRKITVFQRELPLCLELITQAIESCTQQLSGTTTECFNGGLSDCSEQTSGECPVLEEFIPVKKGLSSEFLDEERESLKMRNENKNSEKKQVGQSDWLKSAQLWNPDPDVKEDLPKKTTVVEVKKNGGAFQPFHREKTTGKTNSPVENGPAATLICTAETAFQSSTRREEKDEQGKRKLRRCWSPELHRRFLSALQQLGGSHVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRSSPVHNNGVKQSPQYVVVGGIWVPPSEYSVAPATSVAGDGNEVYVVPTTVSQGGQGSAIKRPQPKRLVQSSTEGRRISHGGEDGIEGGRHSNSPATSSSTHTSTASPGL 370
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 18565463 18566904 + Bpe010994.1 Bpe13g01332 114112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g01332 370 Coils Coil 93 113 - -
Bpe13g01332 370 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 200 260 IPR017930 -
Bpe13g01332 370 MobiDBLite consensus disorder prediction 102 117 - -
Bpe13g01332 370 PANTHER TRANSCRIPTION FACTOR HHO2 15 365 - -
Bpe13g01332 370 MobiDBLite consensus disorder prediction 102 139 - -
Bpe13g01332 370 MobiDBLite consensus disorder prediction 351 370 - -
Bpe13g01332 370 Pfam Myb-like DNA-binding domain 205 256 IPR001005 -
Bpe13g01332 370 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 15 365 IPR044787 GO:0003700|GO:0006355
Bpe13g01332 370 SUPERFAMILY Homeodomain-like 201 261 IPR009057 -
Bpe13g01332 370 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 203 258 IPR006447 GO:0003677
Bpe13g01332 370 MobiDBLite consensus disorder prediction 312 336 - -
Bpe13g01332 370 MobiDBLite consensus disorder prediction 312 370 - -
Bpe13g01332 370 Gene3D - 202 260 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g02281 Bpe13g01332 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe13g01076 Bpe-Chr13:16340578 Bpe13g01332 Bpe-Chr13:18565463 4.82E-59 dispersed
Bpe13g01332 Bpe-Chr13:18565463 Bpe04g01103 Bpe-Chr4:8822631 1.39E-14 dispersed
Bpe13g01332 Bpe-Chr13:18565463 Bpe02g02281 Bpe-Chr2:23606081 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22379 PF00249 Myb_DNA-binding 1.40E-06 CL0123 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g01332 - - vvi:100257723 377.867