Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g01347 ATGTCAGGGAGAAATCGTATGCCTCGACGGTCGGATGGTTTTCGAGGTTACCACGATGGCCCTCGGTCAGTGATGGACCGAGGGCCAGGACACATGCCAATCCATCCAGCTGCATTAGAAGAGGAACTGGAATTACAGCATAGAGAAATGCAGAGAATCATAGCTGAGAATCGTGTTGTTATTGATGATAATACCCTTCTTCAGAGGGAACTGACGGCTGCAAAAGAAGAAGTTCATAGATTGGGACAGATCATTCCCAAAGTCCGTGCTGAGAAAGAAGCACAGACTAGAGAGTTGATTGAAAGAGGGTTAAAGCTTGAAGCTGATCTCCGAGCTTCTGAGCCCCTGAGGGCTGAAGTTCTGCAGTTAAGGTCCGAAATACAAAAGTTGAATAATTTGAGGAAGGATTTGTCTTCCCAAGTCCAGAATCTAACAAAAGATGTTACTCGATTGCAAGCTGAAAATCAGCAAATAACTACGATGAGAGCTGATGTTGATGGGATGCGGAAGGAGCTTGTTGAAGCCAGGAGGGCTTATGAATATGAAAAGAAAGCAAATGAAGAACAAATCGACCAAAAGCAGGCTATGGAGAAGAATCTAATTTCTATGGCTCGTGAAATAGAGAAATTACGCGCTGAGCAGTTGAACACTGAATGGAGGGCCCGAGGATATGGAGCTGGGGGTTATGGAATGTTGAATGGAAGTCCAGAAATGAGATATTCTGGCAGTGCATATGGTGATGGCTATGGCAAAGCTTGGGGATCTTACGATCATCGAGGTCTACCGCGCCGT 792 45.45 MSGRNRMPRRSDGFRGYHDGPRSVMDRGPGHMPIHPAALEEELELQHREMQRIIAENRVVIDDNTLLQRELTAAKEEVHRLGQIIPKVRAEKEAQTRELIERGLKLEADLRASEPLRAEVLQLRSEIQKLNNLRKDLSSQVQNLTKDVTRLQAENQQITTMRADVDGMRKELVEARRAYEYEKKANEEQIDQKQAMEKNLISMAREIEKLRAEQLNTEWRARGYGAGGYGMLNGSPEMRYSGSAYGDGYGKAWGSYDHRGLPRR 264
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 18686154 18687169 - Bpe025289 Bpe13g01347 114127

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g01347 264 PANTHER PROTEIN FLX-LIKE 2 1 264 IPR040353 -
Bpe13g01347 264 Coils Coil 120 171 - -
Bpe13g01347 264 MobiDBLite consensus disorder prediction 8 25 - -
Bpe13g01347 264 Coils Coil 186 213 - -
Bpe13g01347 264 SUPERFAMILY Myosin rod fragments 112 208 - -
Bpe13g01347 264 PANTHER MYOSIN-LIKE PROTEIN 1 264 - -
Bpe13g01347 264 MobiDBLite consensus disorder prediction 1 29 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g01347 - - - qsu:112018538 396.356
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00978 Bpe-Chr8:12192720 Bpe13g01347 Bpe-Chr13:18686154 1.11E-10 dispersed
Bpe11g00436 Bpe-Chr11:3310705 Bpe13g01347 Bpe-Chr13:18686154 1.65E-07 dispersed
Bpe13g01192 Bpe-Chr13:17298982 Bpe13g01347 Bpe-Chr13:18686154 1.03E-23 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g307 . Blo16g01063 . Bda11g01148 Bpe13g01347 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bda11g01148 . . . Bma06g00758 . . . . . Car04g01990 Car15g00842 Cpe13g00417 . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003698 1 1 1 1 1 1 3 1 1 1 1 1 0 1 1 0 1 0 2 1 1 1 1 2 1 1 1 5 6 1 40