Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g01361 ATGGATTTAGGTGGGAATGATAATTTTGAACTAGAAAACAGGACTGAGAATCCTATGAACTGTTCACCAAGTCTGTCCTCTGGCTGGCCATTCGGTGGAGACCACCTTGCAAACACGGCGATGGGATTGGCCAAGGCGAATTCCTCTGGCAAAGAGGATCTAATTTTACCTTCTTGTTCATCGGCTTCAATGGTGGATTCTTTTGGTCCAAACTTCAATGGTGGATTTTTTGATGTTTATAATAACTTCAATTCTTCAAATCTGGTTGGAATAAGCAGAGATAGTGCAGCTTTTTTGAGAAGTGTTGATAGAACTCTTGATGTGAGTTGGAACCCATCAAATCAAATGATGAAAGGAATTAATTTATCGAATTTGATTCACCCGAGCTTACCTCAATTTCCAGCCGATTCTGCATTCATTGAGCGAGCAGCTAGATTATCTTGCTTCAATGGTGGAAATCTCATGGAAACAGCTAGTCCTTTCAGCGTTCCTCAACCTATGGCTCTTTATTCTAGGAGTTTGGTGATTCCAGGCAATCAAGAATTTACAGCCATTGATGGGATGAGATCAGATACCATGGGACAGCCTCAAAAACATGAGAATAGTCATATAGGTGAAGTCTCTATGGATGCTTGCTTGGAGGATGGAACTAACAGTCCTAAGAATGAAGGACAAAATGAGAACCATTGGAGGTCTCATGATGAAGAAAAACAATGTATTGGCGGGTCGGAAGATGAAATGAGTGGTAGTGGTCAAGATGAACCATCTATGGTGGAGGGTAGATGCAAAGAGTCTTCTGGCAACAAAAAAAGGAAAAGGAGTAGGCAGAGTAATGGACTTGATCAAGCCAAAGAAGCTGCACAACAAACCGGTGAATCTGCAAGGGATGATGATGAGATTCAACATAAGAACGATCAAAACCCATGTTCAGTTAACAACAAATCTACTGGAAAACAAGGATCTCAAGCATCCGAACCCCCCAAGGAAGAATACATCCACGTTAGAGCACGAAGAGGTCAGGCAACAAATAGCCATAGTCTTGCAGAAAGGGTTAGAAGGGAAAAGATCAGTGAACGAATGAAGTTTCTTCAAGACCTTGTACCTGGTTGTAGCAAGGTCACTGGCAAGGCGGTAATGCTAGATGAAATTATAAATTACGTACAGTCGCTGCAACGACAAGTAGAGTTTTTGTCAATGAAACTTGCCACTGTCAATCCACGGATAAATTTCAGTATTGATGGTCTTGCGAAAGATATACTTAAAACAAGGGCTGGTCCATCATCTTCGTTGGGCTACTCACCAGACATTTCTATAGGTTATCCTCCATTACAGCTTTCTCAACAAGGGCTTCTTTCCTGGGGTGTTAATGGGATGGGCGGCTCTTCTGAAATTCTCCGAAGAACACTTGCTTCCCAGTTGACACCACCGACTGGTGGATTTAAAGAGCCTGCTCAGCCATCAAATGTGTGGGAGGATGATCTCCACAATGTTTTCCAGACGAGCTTTGGAACTTCAGCTCCTTCCAATACCCAAAATGTTGATGGTAAGATCTATCTATTATTTCCAATTGATCATTCTTTTTACCGTATTCTTATATCCTTTGACTTTAATAAATCCTTTTAA 1623 41.53 MDLGGNDNFELENRTENPMNCSPSLSSGWPFGGDHLANTAMGLAKANSSGKEDLILPSCSSASMVDSFGPNFNGGFFDVYNNFNSSNLVGISRDSAAFLRSVDRTLDVSWNPSNQMMKGINLSNLIHPSLPQFPADSAFIERAARLSCFNGGNLMETASPFSVPQPMALYSRSLVIPGNQEFTAIDGMRSDTMGQPQKHENSHIGEVSMDACLEDGTNSPKNEGQNENHWRSHDEEKQCIGGSEDEMSGSGQDEPSMVEGRCKESSGNKKRKRSRQSNGLDQAKEAAQQTGESARDDDEIQHKNDQNPCSVNNKSTGKQGSQASEPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRINFSIDGLAKDILKTRAGPSSSLGYSPDISIGYPPLQLSQQGLLSWGVNGMGGSSEILRRTLASQLTPPTGGFKEPAQPSNVWEDDLHNVFQTSFGTSAPSNTQNVDGKIYLLFPIDHSFYRILISFDFNKSF 540
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 18848862 18851208 + Bpe011023.1 Bpe13g01361 114141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g01361 540 MobiDBLite consensus disorder prediction 290 304 - -
Bpe13g01361 540 MobiDBLite consensus disorder prediction 212 328 - -
Bpe13g01361 540 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 340 390 IPR011598 GO:0046983
Bpe13g01361 540 MobiDBLite consensus disorder prediction 226 242 - -
Bpe13g01361 540 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 338 409 IPR036638 GO:0046983
Bpe13g01361 540 MobiDBLite consensus disorder prediction 305 323 - -
Bpe13g01361 540 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 42 516 IPR024097 GO:0006355
Bpe13g01361 540 Gene3D - 337 410 IPR036638 GO:0046983
Bpe13g01361 540 PANTHER TRANSCRIPTION FACTOR BHLH49 42 516 - -
Bpe13g01361 540 MobiDBLite consensus disorder prediction 1 21 - -
Bpe13g01361 540 Pfam Helix-loop-helix DNA-binding domain 343 391 IPR011598 GO:0046983
Bpe13g01361 540 CDD bHLH_AtBPE_like 330 415 - -
Bpe13g01361 540 SMART finulus 346 396 IPR011598 GO:0046983
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g02301 Bpe13g01361 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe13g00756 Bpe-Chr13:14089584 Bpe13g01361 Bpe-Chr13:18848862 2.87E-62 dispersed
Bpe13g01361 Bpe-Chr13:18848862 Bpe14g01027 Bpe-Chr14:7638472 3.33E-55 dispersed
Bpe02g00466 Bpe-Chr2:3028853 Bpe13g01361 Bpe-Chr13:18848862 1.69E-49 transposed
Bpe13g01361 Bpe-Chr13:18848862 Bpe02g02301 Bpe-Chr2:23717586 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22382 PF00010 HLH 6.90E-06 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g01361 - - jre:108989406 554.288