Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g01362 ATGGGTTCTGCAACTTCTTCAATGGCTGCAAAGTTTGCGTTTTTTCCTCCAGACCCACCAACATACGCCATTAACGCAGAAGAAACCTCGGGGAAGATAATGATTTCAAACGTGAATCAGAGAGAAAACGTCGACGTATTACGACTGAGCACCAAGAGAGGGAATGAGATTGTAGCCATGTTCGTGAGGAATCCATTAGCTTCACTGACTGTGCTTTATTCCCATGGAAATGCAGCTGATCTTGGTCAAATTTATCACCTTTTCACTCAACTTAGTCTCCATCTCAATGTCAATCTGATGGGGTACGATTATTCTGGGTATGGACAGTCTTCTGGAAAGGTAATGAGCTCAAGCTTTTACAGTTCTGAAAAACTAGCCATTTTTTTTTCTCTTTTCATTAAACTCACGATAAGTTTGAGTTACAAAACTCGTATTAGTTTTCATAATGTGTTATCTCCTTTGGCTTTGGTTTTTTTCTTAAAACCAAGTGAGCAGGACACATATGCTGACATAGAAGCTGCATTTAGATGCCTAGAAGAGAAATATGGTGTGAAGGAAGAAGACATTGTATTGTATGGACAATCGGTTGGAAGTGGACCGACATTGGAAATGGCGACTCAATTGCCTCGTTTGAGAGCTGTTGTTCTTCACAGTCCGATTCTGTCTGGACTTCGTGTCATGTCTTCTGTGAAGAGAACATTCTGGTTTGACATTTACAAGAATATCGATAAAATTACACTGATTGATTGCCCTGTTCTCGTAATTCATCAACGGGTCGTATATACTCGACACTTAGTTTTTAATGAAACCCACTTTCCACTATTTCAAAGTCCTTCCCTACTCCTTTGGCCCTATAATCACTGTCAATTTATGATGTTGGATGCAACAGAGTATCGTATCATACTTAGAGCGTTTCAGTACTGTCTCGAAATCATAGAAAAAATATTTGATATTTCATCGATAATCAATATGCTATCAAGCAGTCACCAAAACATCAAGGATGCATCACTACAGTTATTACTTGAACTTTCAAAAGCCGTGTCGATGTGTGAAAAAATTGGATCAATAACCGGAGGAATTCTTAGACTTCTCACAATAAAGTATAGTCAGTCAACTGATACCTCTATTTCAGGAAAAGTAGATCAAATTTTGAAGAATCTCGAGAGCTATCAGCCGAACATCAGGTGTATGGCAGAATATGGCCACTTAGAACCTCTCTTGACCCACCTTGCTGAAGGTATTGAGGAGACTAAAATAGAAATGGCAAGCTACCTTGGATATATTGTTCTTGGGGATGGCAAACAAATCGACGTGGCAAAGAAAGCGGCTCCGACTTTAGTCAGCATGGTGAAAAGTGGAAATGCAGTTAGCAGAAAGGCAGCATTCAAGGCATTAATACAGATTTCATCTTACCAATTTAATGGAAAAATACTAGCTGAATCTGGAACAATACAAGCCATGGCTGAAGAGCTATTCAATCAGACAATCTCTGATGAGCCAATGAAATCAAAAGTGGAAGCAGCTGTGATTCTTGCAAATATACTCGAATCGGCAATTGAGCTTGAGAATTGGCAAATTGATACTCATGGCAACACTTTAAATTCAGATTATGTGGTGTATAACATCATATACTTGCTGAGGAACTCGTCTCCGGATGAACTCAAACTTAGCCTTGTCAGAATTCTTTTGTGTCTGAAAAAGCATCCAAAGTTAATGGATGCCATTGTTTTTCGAGTGAAGGACAGTGAAGCTGGCTATACTATGATTGAATTCATCAATAACCTACATGAAGAACTTGGAATTGGAGCAATGAAGCTGCTCATTTCTCTCTGCCCTTTCATAGGCCATAGCTTAGCAGAAAGACTGTGCAATATGAGGGACCAACTGGAGAATCTAATTCAAAACCTCACCAGAGAATCGCAAATAAGCGAAAAGCAGGCACTTTCTGCAAAATTTCTTGCAACACTTCCCCACCAGAACTTGACTCTCAATCTTGCCCTTGTGGAGAAGAATGTAGTCCCTGTAATCCTGCAAACGATCAATCAAATCCAAAGAAGTGAAACAAGAACAAGTAGGTATTCCAGTGCTTACTTAGAGGGATTAGTTGGGGTTATAGTCAGATTTACTACTACTTTATATGAACCCCAGTTATTGTTTCTTGCAAGAACCCACAATTTCACGTCGTTTTTCAGTGAATTGCTCATGAAAACATCGAGCGAAGAAGTTCAAAAGTTATCTGCAATTGGATTAGGGAATCTCTCATCAGCCACAATCAGTCTACTAAAAGTGCCGGAAACGGCAACAATCAAGGGAAAGAAGCTATCTTACTTGCACAAAGCACTATCTTATGGGTCATCAAAAAGAAACAAAATGAAGAGCAAAATACCTGTCTGTCCAGTTCATAGAGGCGCCTGCTCATCGCAGAATACATTCTGCTTAATTGATGCAAATGCAGTAGAGAGATTGTTGGATTCTCTAGACAATGAGAATGAAGAAGTGATCGAAGCTTCTCTGTCAGCACTTTGCACCTTGTTGGACGAAAAAGTGGATGTTTTTGAGAGTGTGAATATGTTATGCAGTTATAATGCTATGAAACATGTACTTAATGTGGTAAAAGAACACAAGCAAGAAGCTTTATGGCAGAAATCTCTCTGGGTAATAGAGAGATTTCTGTTGAAAGGTGGAGATAAGTCTGCTTCAGACATTTCGCAGGACAAATTGTTTCCTACTGCATTGATTAGTGCTTTTCATCATGGAGATGATCATACAAGGGAAATGGCTGAGAGGATAATGAGTCTTATGAACATGATGCCCAAGTTCTCTGTCACAGACTAA 2835 39.33 MGSATSSMAAKFAFFPPDPPTYAINAEETSGKIMISNVNQRENVDVLRLSTKRGNEIVAMFVRNPLASLTVLYSHGNAADLGQIYHLFTQLSLHLNVNLMGYDYSGYGQSSGKVMSSSFYSSEKLAIFFSLFIKLTISLSYKTRISFHNVLSPLALVFFLKPSEQDTYADIEAAFRCLEEKYGVKEEDIVLYGQSVGSGPTLEMATQLPRLRAVVLHSPILSGLRVMSSVKRTFWFDIYKNIDKITLIDCPVLVIHQRVVYTRHLVFNETHFPLFQSPSLLLWPYNHCQFMMLDATEYRIILRAFQYCLEIIEKIFDISSIINMLSSSHQNIKDASLQLLLELSKAVSMCEKIGSITGGILRLLTIKYSQSTDTSISGKVDQILKNLESYQPNIRCMAEYGHLEPLLTHLAEGIEETKIEMASYLGYIVLGDGKQIDVAKKAAPTLVSMVKSGNAVSRKAAFKALIQISSYQFNGKILAESGTIQAMAEELFNQTISDEPMKSKVEAAVILANILESAIELENWQIDTHGNTLNSDYVVYNIIYLLRNSSPDELKLSLVRILLCLKKHPKLMDAIVFRVKDSEAGYTMIEFINNLHEELGIGAMKLLISLCPFIGHSLAERLCNMRDQLENLIQNLTRESQISEKQALSAKFLATLPHQNLTLNLALVEKNVVPVILQTINQIQRSETRTSRYSSAYLEGLVGVIVRFTTTLYEPQLLFLARTHNFTSFFSELLMKTSSEEVQKLSAIGLGNLSSATISLLKVPETATIKGKKLSYLHKALSYGSSKRNKMKSKIPVCPVHRGACSSQNTFCLIDANAVERLLDSLDNENEEVIEASLSALCTLLDEKVDVFESVNMLCSYNAMKHVLNVVKEHKQEALWQKSLWVIERFLLKGGDKSASDISQDKLFPTALISAFHHGDDHTREMAERIMSLMNMMPKFSVTD 944
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 18852945 18866371 - Bpe011024.1 Bpe13g01362 114142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g01362 944 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 42-RELATED 310 942 - -
Bpe13g01362 944 SUPERFAMILY ARM repeat 377 932 IPR016024 -
Bpe13g01362 944 Coils Coil 619 646 - -
Bpe13g01362 944 Gene3D - 437 611 IPR011989 -
Bpe13g01362 944 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 310 942 - -
Bpe13g01362 944 Pfam Armadillo/beta-catenin-like repeat 806 844 IPR000225 GO:0005515
Bpe13g01362 944 Gene3D - 716 936 IPR011989 -
Bpe13g01362 944 SMART arm_5 806 846 IPR000225 GO:0005515
Bpe13g01362 944 SMART arm_5 714 755 IPR000225 GO:0005515
Bpe13g01362 944 SMART arm_5 390 430 IPR000225 GO:0005515
Bpe13g01362 944 Coils Coil 816 836 - -
Bpe13g01362 944 Gene3D alpha/beta hydrolase 36 281 IPR029058 -
Bpe13g01362 944 Gene3D - 317 436 IPR011989 -
Bpe13g01362 944 SUPERFAMILY alpha/beta-Hydrolases 46 256 IPR029058 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01758 Bpe-Chr2:19917990 Bpe13g01362 Bpe-Chr13:18852945 2.04E-108 dispersed
Bpe09g00527 Bpe-Chr9:14045730 Bpe13g01362 Bpe-Chr13:18852945 3.09E-96 dispersed
Bpe12g00679 Bpe-Chr12:12410661 Bpe13g01362 Bpe-Chr13:18852945 7.41E-100 dispersed
Bpe14g00104 Bpe-Chr14:1505841 Bpe13g01362 Bpe-Chr13:18852945 1.42E-41 dispersed
Bpe15g01394 Bpe-Chr15:21838377 Bpe13g01362 Bpe-Chr13:18852945 2.05E-21 dispersed
Bpe13g01362 Bpe-Chr13:18852945 Bpe02g01423 Bpe-Chr2:17682360 1.17E-97 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g01362 - - jre:108989404 777.319