Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g01364 ATGGGGAACCTCACGCAGCTATATTCTATGGAAGAAGCCTCCCAGCACAATACAATGGATGATTGCTGGATCGTCGTCGACGGCAAGGTTTATGATGTTACATCGTATTTAGATGATCACCCCGGTGGAGATGAAATTATCCTTGCTGTCACTGGCAAAGATGCAACAGATGAGTTTGAGGATGCTGGCCATAGCAAAGATGCAAAGGAGCTCTTGCAAACTTACTGCATCGGTGAGCTTGACCCGACTTCCCAAGTAACCCCGTCTGAAGACTCTCCTACTGATTATATGCAAAAGGCTCGTAATTTAACGAACCAATACTGGTTAGTTCCCATGACTATAGTTGGAATCTCAGTCATAGTCGGCTTCTTATTCTTGAAAAAGAAGTAG 390 44.36 MGNLTQLYSMEEASQHNTMDDCWIVVDGKVYDVTSYLDDHPGGDEIILAVTGKDATDEFEDAGHSKDAKELLQTYCIGELDPTSQVTPSEDSPTDYMQKARNLTNQYWLVPMTIVGISVIVGFLFLKKK 129
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 18880415 18881717 - Bpe011025.1 Bpe13g01364 114144

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g01364 129 Gene3D - 4 91 IPR036400 -
Bpe13g01364 129 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Bpe13g01364 129 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Bpe13g01364 129 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Bpe13g01364 129 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Bpe13g01364 129 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 4 87 IPR036400 -
Bpe13g01364 129 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Bpe13g01364 129 PANTHER CYTOCHROME B5 ISOFORM A 3 128 - -
Bpe13g01364 129 SMART Cyt_b5_2 8 81 IPR001199 -
Bpe13g01364 129 Pfam Cytochrome b5-like Heme/Steroid binding domain 10 80 IPR001199 -
Bpe13g01364 129 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Bpe13g01364 129 PANTHER CYTOCHROME B5 3 128 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g01364 K23490 CYB5; cytochrome b5 - fve:101305164 192.586
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe13g01364 Bpe-Chr13:18880415 Bpe14g00841 Bpe-Chr14:6314134 1.55E-34 dispersed
Bpe13g01364 Bpe-Chr13:18880415 Bpe13g00852 Bpe-Chr13:14727354 1.96E-35 transposed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bpe13g00852 . 1 134 NADPH P450 reductases AT5G53560 69.4 1.5e-52 202.2
Bpe14g00841 . 1 115 NADPH P450 reductases AT5G53560 68.7 3.3e-44 174.5
Bpe14g00928 . 1 137 NADPH P450 reductases AT5G53560 52.6 1.4e-37 152.5
Bpe13g00852 . 1 134 NADPH P450 reductases AT5G48810 63.2 1.6e-49 192.2
Bpe03g00947 . 1 138 NADPH P450 reductases AT5G48810 57.0 9.5e-42 166.4
Bpe14g00841 . 1 115 NADPH P450 reductases AT5G48810 61.5 4.7e-41 164.1
Bpe13g00852 . 22 133 NADPH P450 reductases AT2G32720 81.3 4.5e-49 190.7
Bpe14g00841 . 22 115 NADPH P450 reductases AT2G32720 79.8 2.5e-39 158.3
Bpe13g01364 . 1 128 NADPH P450 reductases AT1G26340 60.4 2.0e-41 165.2
Bpe04g01356 BCT 2 281 NADPH P450 reductases AT5G17770 80.7 4.0e-132 467.6
Bpe03g01064 BCT 2 281 NADPH P450 reductases AT5G17770 80.7 5.2e-132 467.2
Bpe08g00318 . 7 302 NADPH P450 reductases AT5G17770 68.6 5.8e-115 410.6
Bpe13g00852 . 1 134 NADPH P450 reductases AT5G53560 69.4 1.5e-52 202.2
Bpe14g00841 . 1 115 NADPH P450 reductases AT5G53560 68.7 3.3e-44 174.5
Bpe14g00928 . 1 137 NADPH P450 reductases AT5G53560 52.6 1.4e-37 152.5
Bpe13g00852 . 1 134 NADPH P450 reductases AT5G48810 63.2 1.6e-49 192.2
Bpe03g00947 . 1 138 NADPH P450 reductases AT5G48810 57.0 9.5e-42 166.4
Bpe14g00841 . 1 115 NADPH P450 reductases AT5G48810 61.5 4.7e-41 164.1
Bpe13g00852 . 22 133 NADPH P450 reductases AT2G32720 81.3 4.5e-49 190.7
Bpe14g00841 . 22 115 NADPH P450 reductases AT2G32720 79.8 2.5e-39 158.3
Bpe13g01364 . 1 128 NADPH P450 reductases AT1G26340 60.4 2.0e-41 165.2
Bpe04g01356 BCT 2 281 NADPH P450 reductases AT5G17770 80.7 4.0e-132 467.6
Bpe03g01064 BCT 2 281 NADPH P450 reductases AT5G17770 80.7 5.2e-132 467.2
Bpe08g00318 . 7 302 NADPH P450 reductases AT5G17770 68.6 5.8e-115 410.6
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0013997 0 1 0 0 1 1 1 1 1 1 0 1 1 1 1 1 1 2 0 1 1 0 1 0 1 0 1 1 2 1 24