Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe13g01369 | ATGAGAACTGGGAAATCCAATCGGGAAGAAGACGAGTTCGAGGAGGAAGAGTTCATTTCCAAAAAAGAAGGCCCTTCTTCGTCTTCTATTGCCAACATTAATAGCAATAGCAAAGAGGTGAAGAACAACGATAAAGCTAATGCAATCCGGTCTAAGCATTCTGTTACAGAGCAACGAAGAAGAAGCAAGATCAATGAGAGGTTCCAAATGTTGAGAGATCTCATACCTCATAGTGATCAAAAGAGGGATACAGCATCTTTCCTACTCGAATTAACTACTACTAATATTCATTTGCAGGTGATTGAGTATGTTCGGTATTTACAAGAAAAAGTGCAGAAGTATGAAGGTTCGTATCAGAGCTGGAGCGGGGAGCCTACCAAATTAATGCCATGGAGAAATAGTCATTGGCGGGCCCAAAGTTTTGCCAGTTCAGTTCCGGGATTAACTTTTCCGGGTAAATTTGATGAAACCCAAAACTTGGAGGATTCACTTGCAAATAGGGACCTTGTTCGACAAGGCGATGGAGCAAACATAGGGACCCCTTTGCAAGTTCCTTTGCAGGTTAGCATTCCGTCTTCTGTACGAAACGATGGCACTCTTGCTCGTCCTCTTCAAGCTCCGGGTTCTAATGTGCACTCAACTGAGTGTCTAGACCCATCTGAGACTTTAAACCAGACTGAGGAGGTGACTATCGAAGGCGGAACTATAAGTATCTCGAGTTTATACTCAGAAGGCTTATTGAACACTTTGACACAAGCACTCAAGGGTGCTGGAGTGGATCTGTCTCAGGCCAGTATCTCTATTCAGATAGACATCGGAAAAAGAGCAGGCGGGACATCGGCCTTGAAGGATCATGAGAGTAATGAAGAAACAATGCATACAAAGGACAGAGGCAGTGCAGAGGACTCAAATCAAGCCGTAAAAAGGTTAAAAACGTAA | 939 | 43.56 | MRTGKSNREEDEFEEEEFISKKEGPSSSSIANINSNSKEVKNNDKANAIRSKHSVTEQRRRSKINERFQMLRDLIPHSDQKRDTASFLLELTTTNIHLQVIEYVRYLQEKVQKYEGSYQSWSGEPTKLMPWRNSHWRAQSFASSVPGLTFPGKFDETQNLEDSLANRDLVRQGDGANIGTPLQVPLQVSIPSSVRNDGTLARPLQAPGSNVHSTECLDPSETLNQTEEVTIEGGTISISSLYSEGLLNTLTQALKGAGVDLSQASISIQIDIGKRAGGTSALKDHESNEETMHTKDRGSAEDSNQAVKRLKT | 312 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 18949327 | 18952113 | - | Bpe011030.1 | Bpe13g01369 | 114149 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe13g01369 | 312 | PANTHER | TRANSCRIPTION FACTOR BIM2 | 1 | 312 | - | - | |
Bpe13g01369 | 312 | MobiDBLite | consensus disorder prediction | 279 | 312 | - | - | |
Bpe13g01369 | 312 | SMART | finulus | 54 | 113 | IPR011598 | GO:0046983 | |
Bpe13g01369 | 312 | MobiDBLite | consensus disorder prediction | 1 | 63 | - | - | |
Bpe13g01369 | 312 | MobiDBLite | consensus disorder prediction | 43 | 63 | - | - | |
Bpe13g01369 | 312 | MobiDBLite | consensus disorder prediction | 23 | 42 | - | - | |
Bpe13g01369 | 312 | Gene3D | - | 46 | 127 | IPR036638 | GO:0046983 | |
Bpe13g01369 | 312 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 48 | 107 | IPR011598 | GO:0046983 | |
Bpe13g01369 | 312 | PANTHER | BES1-INTERACTING MYC-LIKE PROTEIN | 1 | 312 | IPR044295 | GO:0003700|GO:0006351|GO:0046983 | |
Bpe13g01369 | 312 | Pfam | Helix-loop-helix DNA-binding domain | 50 | 108 | IPR011598 | GO:0046983 | |
Bpe13g01369 | 312 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 46 | 129 | IPR036638 | GO:0046983 | |
Bpe13g01369 | 312 | CDD | bHLH_AtBIM_like | 47 | 132 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe07g00745 | Bpe-Chr7:13981120 | Bpe13g01369 | Bpe-Chr13:18949327 | 5.80E-54 | dispersed | |
Bpe11g00039 | Bpe-Chr11:277454 | Bpe13g01369 | Bpe-Chr13:18949327 | 2.33E-52 | dispersed | |
Bpe13g01369 | Bpe-Chr13:18949327 | Bpe03g00724 | Bpe-Chr3:27356221 | 1.42E-07 | dispersed | |
Bpe13g01369 | Bpe-Chr13:18949327 | Bpe02g02304 | Bpe-Chr2:23736165 | 2.89E-124 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
22385 | PF00010 | HLH | 4.20E-09 | No_clan | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe13g01369 | - | - | qsu:112028766 | 347.821 |