Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g01373 ATGAATAATCATCGGCCTGGTCTACCAGCTCTGAAGAAGCGAGGTCATGGATGCCGTTCTTGGATAAAAATTGATCAGGATGGAAACTCAAAAATATTGGAACTTGATAAGGCCACAATAATGAGGCATTGCTCCCTACCTTCTAGAGATCTTCGACTTTTGGATCCTATGTTCATTTATCCTTCTACGATACTGGGACGAGAGAAGGCGATTGTGGTCAGTCTTGAACAGATCAGATGTATAATCACTTCTAATGAAGTTGTTTTAATGAACTCCTTAGATGGGTGTGTTGTACAATACAGGTCGGAGTTGTCCAAGCGCCTCCAGACCTCTAAATATGAATCAGGTGAACAACCATATGGTTTACCCTTTGAGTTTAAAGCCCTGGAGCTGGGTTTGGAGCTCACTTGCATGTCTCTAGATGCTCAGGTGAAGGAACTGGAAATGGAGATATATCCTGGCCTGGATGAACTTGCATTATCCATTAACACCCTTAACCTAGAACGGGTCCGAAGATTTAAAGGCCATCTCCTTGGATTGACCCAGCGTGTTCAAAAGGTTCGTGATGAAATTGAACATCTCATGGACGATGATGGTGATATGGCTGAGATGTATTTGACTGAGAAAAAAGAAAGGTTAGAGGGTTATACCCTAAATGACCTTCCCATTCAAACAAAGCACGGATCAAAGTTGCTATCCAAATCTGCTCCCGTTTCGCCAGTTGGATCAATTAATCGAACCCAGAAACTGGAAAGGACTTTTAGTGGTGTTGTTAGTTCAGGCAGACATGGAAGCTCGATAAGTTCATCCAACAATAGAGAAAACATTGATCAACTGGAAATGCTACTTGAAGCCTACTTTGTCGGCATAGACAACACCCTCAACAAGTTATTATCGCTCAAGGAATGTATTGATGATACTGAAGATTTAATCAACATTAAACTGGATAATGTTCAGAACCACCTGATAAAATTTCAGCTACTTCTCACAGCAGCTACTTTCATGGCTACAATCTTTGCTACGGTTACTGCAATTTTCGGTATGAATTTCACTGCTCAAATCTTCGATTCTCCAACTGCATTCAACTGGGTTTTAGTTGTAACTAGTGGCTTTTGTGTATTATTTTTCTTATCTTTCCAGATTTATTTTAGGCATAAGAAATCTTTCCCATTGTAA 1176 40.31 MNNHRPGLPALKKRGHGCRSWIKIDQDGNSKILELDKATIMRHCSLPSRDLRLLDPMFIYPSTILGREKAIVVSLEQIRCIITSNEVVLMNSLDGCVVQYRSELSKRLQTSKYESGEQPYGLPFEFKALELGLELTCMSLDAQVKELEMEIYPGLDELALSINTLNLERVRRFKGHLLGLTQRVQKVRDEIEHLMDDDGDMAEMYLTEKKERLEGYTLNDLPIQTKHGSKLLSKSAPVSPVGSINRTQKLERTFSGVVSSGRHGSSISSSNNRENIDQLEMLLEAYFVGIDNTLNKLLSLKECIDDTEDLINIKLDNVQNHLIKFQLLLTAATFMATIFATVTAIFGMNFTAQIFDSPTAFNWVLVVTSGFCVLFFLSFQIYFRHKKSFPL 391
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 18972938 18975506 + Bpe011033.1 Bpe13g01373 114153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g01373 391 CDD Mrs2_Mfm1p-like 21 387 IPR039204 -
Bpe13g01373 391 Gene3D - 10 92 - -
Bpe13g01373 391 PANTHER MAGNESIUM TRANSPORTER MRS2-5 3 391 - -
Bpe13g01373 391 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 327 379 IPR045863 -
Bpe13g01373 391 Coils Coil 177 197 - -
Bpe13g01373 391 Gene3D Magnesium transport protein CorA, transmembrane region 96 322 - -
Bpe13g01373 391 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 3 391 IPR039204 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00575 Bpe-Chr3:26022567 Bpe13g01373 Bpe-Chr13:18972938 1.11E-143 dispersed
Bpe07g00026 Bpe-Chr7:180008 Bpe13g01373 Bpe-Chr13:18972938 3.92E-88 dispersed
Bpe07g00288 Bpe-Chr7:2078333 Bpe13g01373 Bpe-Chr13:18972938 7.92E-81 dispersed
Bpe08g01293 Bpe-Chr8:14280865 Bpe13g01373 Bpe-Chr13:18972938 4.44E-13 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g01373 K16075 - vvi:100262794 542.732