Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g01375 ATGGGATCAAAAAATGTGCTCACAGATTTGGTATTGGAAGAATGGAATGGTTCTTCTTCTACGAAGCTTTCTAGAACAGCCACCATAACTGCCGCTCCTCGCCTCACCATCGAAAGGCGAGGCTTTCCTAGCAGTGTAACTCCGGATTATGTCCCTTTTCAAGTATGGGATTTGTTGCAGGGTCTCTCAACATACATAAGGACTATGCTTTCTACACAAGCTCTGTTGAGTGCCATTGGAGTTGGTGAGAAATCGGCGACTGTGATTGGTGCCACATTTCAGTGGTTTCTGAGGGATCTGACTGGAATGGTTGGAGGTATCTTATTCACATTCTATCAGGGATCAAATCTAGATAGTAATGCAAAAATGTGGCGTTTGGTTGCAGATCTTATGAATGATCTTGGGATGTTAATGGACCTACTCTCCCCATTATTTCCATCGGCATTCATACTCATTGTTTGCTTAGGCAGCCTGTCAAGATCATTCACTGGTGTTGCTAGTGGAGCTACCAGAGCTGCTTTAACACAGCATTTTGCCCTTCAGCATAACGCAGCAGATATATCTGCCAAGGAAGGAAGTCAAGAGACAGTAGCCACAATGATAGGAATGGCGTTGGGTATGCTTCTTGCGCATGTTACAGTGGGACATCCGCTGGCCATTTGGTTCTCTTTTTTGTTTCTCACCATGTTTCATATGTATGCGAACTACAAGGCTGTGCGGTGCGTTGCTTTGACTTCATTAAACCCAGAGCGAAGTTCAATTGCTTTACAGCATTTCATGGCGTCTGGTCAAGTTCTCTCTCCTGAAAAAGTCTCAAGGATGGAGCATGTATTACCCACATGGGCGGCCTTCTCATGGAGCTCCGAGAATGCAAAATTACTGCATGCTCGAGTTCAACTAGGCGTGAGGCTTACTTCTCTTGATCAATTGGAAATGATGGACTTGTTGCAGTCCACTGGTGCTCACTATAATAAAGCAAAGCATTTGCTGGTGGAGAGGAAGGAAGTTGTAGGCATTATTATGCATAAAGATTCAACCTCTGCGGATGTCTTGCACGCTTTTATTCATGCACTTGTTATGGCAAATCTTCCTGATACAAAAAACTCCAAGCATTTGGAGAGCAGAACATGGATGGATAAAAACTATGAAGTTTTTATTGAAAAGCTAAACTCGTCGGGTTGGAAAACAGAACGACTGCTCTCGCAATCGATTGTTTGGAGAGCAAACTGGTTATCTGGTTCTGTAGATGAGAAGATTGACTAA 1263 43.63 MGSKNVLTDLVLEEWNGSSSTKLSRTATITAAPRLTIERRGFPSSVTPDYVPFQVWDLLQGLSTYIRTMLSTQALLSAIGVGEKSATVIGATFQWFLRDLTGMVGGILFTFYQGSNLDSNAKMWRLVADLMNDLGMLMDLLSPLFPSAFILIVCLGSLSRSFTGVASGATRAALTQHFALQHNAADISAKEGSQETVATMIGMALGMLLAHVTVGHPLAIWFSFLFLTMFHMYANYKAVRCVALTSLNPERSSIALQHFMASGQVLSPEKVSRMEHVLPTWAAFSWSSENAKLLHARVQLGVRLTSLDQLEMMDLLQSTGAHYNKAKHLLVERKEVVGIIMHKDSTSADVLHAFIHALVMANLPDTKNSKHLESRTWMDKNYEVFIEKLNSSGWKTERLLSQSIVWRANWLSGSVDEKID 420
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 18989345 18995473 + Bpe011035.1 Bpe13g01375 114155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g01375 420 PANTHER PROTEIN ROOT UVB SENSITIVE 3 7 420 - -
Bpe13g01375 420 Pfam Vitamin B6 photo-protection and homoeostasis 41 262 IPR006968 -
Bpe13g01375 420 PANTHER RUS1 FAMILY PROTEIN C16ORF58 7 420 IPR006968 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe10g00370 Bpe-Chr10:11281161 Bpe13g01375 Bpe-Chr13:18989345 6.18E-35 dispersed
Bpe11g01171 Bpe-Chr11:8679803 Bpe13g01375 Bpe-Chr13:18989345 1.52E-26 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g01375 - - jre:109014367 645.966