Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g01378 ATGGTTGCTCTCTTCGTCGGCTTGAACTCTGCTCCGCCGGAGGCGAAATGGAGGTCTATGAAGCATCTGAGGGGGAGAGTTATGGCCAATGCGTTTCCCTCCTTCCTTCCCAAAGAAGTCGACAAAATCAAAGATCCTTTTGCTCGGAAGCTGGCGTCTAGGATTGAGAGGGTTCCGGTGAGCTTTTCTCAAAATTGTGTTATGACTAGTTGTGTGAGGCCATCGATAAAGAGTGAAACGAGTCCAGTGGTTCTACTCCATGGTTTTGACAGCTCCTGCTTAGAGTGGAGATATACACATCCATTGCTTGAGGAGGCTGGTTTGGAGACTTGGGCTGTTGACATTCTTGGATGGGGATTTTCTGATTTAGAAAGCCTTCCACCTGTTGATGTGACATCAAAGCGTGAACACTTTTATCAGCTTTGGAGTACCTACATTAAAAGGCCTATGTTATTGGTTGGACCAAGCCTCGGTGCTGCTGTTGCTATTGATTTTGCAGTCAAATATCCAGAGGCTGTTGAAATGCTTGTTTTGATAGATGCTAGTGTATATGCAGAAGGCACTGGAAACTTATCAACCTTACCGAGAGGGCTAGCATATGCCGGGGTGTCTTTGTTAAAGAGCATACCTCTGCGTCTCTATGTGAACGTGTTGGCATTCAATTCCATATCACTGAATACAAGCATTGATTGGATGAGAGTGGGTCGTTTACATTGCCTTCTACCTTGGTGGGAGGATACAACAGTGAATTTTATGATGAGCGGAGGTTATACTGTCAGCGGCTTGATAAAACAGGTAAAACAGAAGACGCTCGTCATATGGGGTGAGAATGATCAGATTATCAGCAACAAATTTGCAGTGAGATTGAACAGTGAGTTGCCAAATTCAATTCTTCGACAAGTACCCGAATGCGGCCACATTCCTCACGTGGAGAAGCCAAGCATCGTCGCCCGTTTTATCGCGGAGTTTGTTAGAGAAGAATCCACTAATAAAAAGGTTAAGCTTTTCTCATAG 1014 44.87 MVALFVGLNSAPPEAKWRSMKHLRGRVMANAFPSFLPKEVDKIKDPFARKLASRIERVPVSFSQNCVMTSCVRPSIKSETSPVVLLHGFDSSCLEWRYTHPLLEEAGLETWAVDILGWGFSDLESLPPVDVTSKREHFYQLWSTYIKRPMLLVGPSLGAAVAIDFAVKYPEAVEMLVLIDASVYAEGTGNLSTLPRGLAYAGVSLLKSIPLRLYVNVLAFNSISLNTSIDWMRVGRLHCLLPWWEDTTVNFMMSGGYTVSGLIKQVKQKTLVIWGENDQIISNKFAVRLNSELPNSILRQVPECGHIPHVEKPSIVARFIAEFVREESTNKKVKLFS 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 19001666 19005411 + Bpe011038.1 Bpe13g01378 114158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g01378 337 PRINTS Epoxide hydrolase signature 301 323 IPR000639 GO:0003824
Bpe13g01378 337 PRINTS Epoxide hydrolase signature 107 122 IPR000639 GO:0003824
Bpe13g01378 337 PRINTS Epoxide hydrolase signature 87 105 IPR000639 GO:0003824
Bpe13g01378 337 PRINTS Epoxide hydrolase signature 166 179 IPR000639 GO:0003824
Bpe13g01378 337 SUPERFAMILY alpha/beta-Hydrolases 81 325 IPR029058 -
Bpe13g01378 337 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 23 331 - -
Bpe13g01378 337 Gene3D alpha/beta hydrolase 71 334 IPR029058 -
Bpe13g01378 337 Pfam Alpha/beta hydrolase family 83 318 IPR000073 -
Bpe13g01378 337 PRINTS Alpha/beta hydrolase fold signature 107 122 IPR000073 -
Bpe13g01378 337 PRINTS Alpha/beta hydrolase fold signature 166 179 IPR000073 -
Bpe13g01378 337 PRINTS Alpha/beta hydrolase fold signature 152 165 IPR000073 -
Bpe13g01378 337 PRINTS Alpha/beta hydrolase fold signature 270 284 IPR000073 -
Bpe13g01378 337 PANTHER HYDROLASE 23 331 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g00054 Bpe-Chr11:401904 Bpe13g01378 Bpe-Chr13:19001666 1.15E-147 dispersed
Bpe13g01378 Bpe-Chr13:19001666 Bpe15g00423 Bpe-Chr15:15773248 4.57E-16 dispersed
Bpe11g01427 Bpe-Chr11:10615989 Bpe13g01378 Bpe-Chr13:19001666 1.63E-101 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g01378 - - pvy:116123531 492.271