Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe13g01381 | ATGTCGGCTAATATATTTTGTAGGAGCAAAGTCCGAAAGAGAGGCCAAAAGAGAACGCGACAGCAAAGATTTGCGTTTCTAACCAAGAGTGAGATCGATCATCTTGAAGATGGGTATAGATGGAGAAAATATGGACAGAAAGCTGTTAAAAATAGTCCATTCCCAAGCAGGAGTTACTACCGCTGCACAAACAGCAAATGTACTGTGAAGAAGAGGGTTGAGCGTTCATCGGAAGATCCCACCATTGTTGTAACCACATACGAAGGTCAACATTGCCATTACACTGTAGGATTGTCTCGAGGCGGAGTCATTGGCCATGCAGCTTCCTTTGATGGTCAGTTTCCGCCTCTCGTCCCCCATTTTTATTGCCCTGAACTTAACCTTCCAGCGGAGAATCCACTTATTGTGCCACAGTTACAGCCGGACGGAATATCTAATGTGATTTCAGAGCCGGCTTCGCAGCTTATTCCTCCTGATCAAGGATTGCTAGGCGACATTGCGCTGAGTGGAATACGTAAAAGATGA | 525 | 45.52 | MSANIFCRSKVRKRGQKRTRQQRFAFLTKSEIDHLEDGYRWRKYGQKAVKNSPFPSRSYYRCTNSKCTVKKRVERSSEDPTIVVTTYEGQHCHYTVGLSRGGVIGHAASFDGQFPPLVPHFYCPELNLPAENPLIVPQLQPDGISNVISEPASQLIPPDQGLLGDIALSGIRKR | 174 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 19042579 | 19043534 | - | Bpe011041.1 | Bpe13g01381 | 114161 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe13g01381 | 174 | ProSiteProfiles | WRKY domain profile. | 30 | 96 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe13g01381 | 174 | SMART | WRKY_cls | 35 | 95 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe13g01381 | 174 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 10 | 101 | IPR044810 | GO:0003700 | |
Bpe13g01381 | 174 | Pfam | WRKY DNA -binding domain | 36 | 93 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe13g01381 | 174 | SUPERFAMILY | WRKY DNA-binding domain | 28 | 94 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe13g01381 | 174 | Gene3D | WRKY domain | 22 | 89 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe13g01381 | 174 | PANTHER | WRKY TRANSCRIPTION FACTOR 48-RELATED | 10 | 101 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe13g01381 | Bpe-Chr13:19042579 | Bpe14g01092 | Bpe-Chr14:8150578 | 1.90E-44 | dispersed | |
Bpe13g01381 | Bpe-Chr13:19042579 | Bpe02g02321 | Bpe-Chr2:23847237 | 4.22E-99 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
22386 | PF03106 | WRKY | 1.40E-23 | CL0274 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe13g01381 | - | - | itr:116025461 | 219.55 |