Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g01381 ATGTCGGCTAATATATTTTGTAGGAGCAAAGTCCGAAAGAGAGGCCAAAAGAGAACGCGACAGCAAAGATTTGCGTTTCTAACCAAGAGTGAGATCGATCATCTTGAAGATGGGTATAGATGGAGAAAATATGGACAGAAAGCTGTTAAAAATAGTCCATTCCCAAGCAGGAGTTACTACCGCTGCACAAACAGCAAATGTACTGTGAAGAAGAGGGTTGAGCGTTCATCGGAAGATCCCACCATTGTTGTAACCACATACGAAGGTCAACATTGCCATTACACTGTAGGATTGTCTCGAGGCGGAGTCATTGGCCATGCAGCTTCCTTTGATGGTCAGTTTCCGCCTCTCGTCCCCCATTTTTATTGCCCTGAACTTAACCTTCCAGCGGAGAATCCACTTATTGTGCCACAGTTACAGCCGGACGGAATATCTAATGTGATTTCAGAGCCGGCTTCGCAGCTTATTCCTCCTGATCAAGGATTGCTAGGCGACATTGCGCTGAGTGGAATACGTAAAAGATGA 525 45.52 MSANIFCRSKVRKRGQKRTRQQRFAFLTKSEIDHLEDGYRWRKYGQKAVKNSPFPSRSYYRCTNSKCTVKKRVERSSEDPTIVVTTYEGQHCHYTVGLSRGGVIGHAASFDGQFPPLVPHFYCPELNLPAENPLIVPQLQPDGISNVISEPASQLIPPDQGLLGDIALSGIRKR 174
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 19042579 19043534 - Bpe011041.1 Bpe13g01381 114161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g01381 174 ProSiteProfiles WRKY domain profile. 30 96 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe13g01381 174 SMART WRKY_cls 35 95 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe13g01381 174 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 10 101 IPR044810 GO:0003700
Bpe13g01381 174 Pfam WRKY DNA -binding domain 36 93 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe13g01381 174 SUPERFAMILY WRKY DNA-binding domain 28 94 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe13g01381 174 Gene3D WRKY domain 22 89 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe13g01381 174 PANTHER WRKY TRANSCRIPTION FACTOR 48-RELATED 10 101 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe13g01381 Bpe-Chr13:19042579 Bpe14g01092 Bpe-Chr14:8150578 1.90E-44 dispersed
Bpe13g01381 Bpe-Chr13:19042579 Bpe02g02321 Bpe-Chr2:23847237 4.22E-99 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22386 PF03106 WRKY 1.40E-23 CL0274 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g01381 - - itr:116025461 219.55