Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g01388 ATGTTTGCTGATGCAGAAATCAAACAGGTGGAAGAAAAAGTGGACCCACTTACTAGGCGACCAATCAAATGCGACCGGACCCACGATTCCTTTGATTTTTGCACCGTCAACGTGGCCACCGTCATGGACCCCACCACCTCCACGTTTTCTGTGATGGACCCCACCTTGCGGACCTTACATTTGGTTGAGAAAATCCGTCCTTACCCGAGAAAAAAGGAGAATCATACCATGGGAAGGATCAGAGAGCTCAAAATCTCCTCGGGCCCACCACCAAAAAAATGTGAAATTTACCATAATCTCCCTGCCCTCGTATTCAGCGCGGGAGGGTACACGGGAAACTTCTTTCACGATTTCAACGACGGGTTCATTCCTCTCTTCATCACCGTCAATTCCTTTTACCAGAATCAAGATTTCATCCTCGTCGTATCGACGGCTCGTGATTGGTGGATTTCTAAGTACAAACATGTTCTACAAGGATTCAGCAAGCACCGGATTATAAACCTCGAAAATGATACATCCACCCACTGTTTTCCTTCCGCCACCCTCGGCCTCATATCACATGGATACTTAACTATTGATCCAAATTTAATGCCCACCTCCAAAACATTAACCCATTTTAGATCATTCCTCGCCCAAGCCATCGAGCAACATATTCCACCCACCACTCACCCATCTACATCCACGTCCACGTCCATGATCCGGCCCCGACTTATCCTACTTAGTCGAAAGTCGCCAGTAGGTCGGGTCCTCCTGAATGAAGCCGCACTAAAGAATCTCGCCGAAACGATAGGGTTTGTTGTGACACTATTCATTCCATCCACTAAAATTCCGTTGACCGACACTTACAATATAATCAACTCGAGTCAAGTGGTCGTTGGGGTGCATGGTGCAGGAATGACGCACTTGTTGTTCATGCGTAGAGGCTCGGTTCTGGTGCAGGTGGTGCCTCTCGGGACAGAGTGGGCGGCGAAGGTGTGCTACGGTGAGCCGGCTTGGGCAATGGGGTTAGAATATATGGAGTACAGAGTCCGTGCAAACGAGAGTAGCTTGATAGAGAAGTATGGGGAGGAGGAGGAGATAATAAAGAATCCTCGAGCTTATAGGGGAAAGAATTGGTCTCTCATGAATGTTTATTTGAAAGAGCAAAATGTTAGACTGGACTTGATTAGATTCAAGGAGTATTTAGAAGAAGCTTATAGGAAGGCTAAGAAGTTGATGGAAAATGGGGCACTGTAA 1236 47.01 MFADAEIKQVEEKVDPLTRRPIKCDRTHDSFDFCTVNVATVMDPTTSTFSVMDPTLRTLHLVEKIRPYPRKKENHTMGRIRELKISSGPPPKKCEIYHNLPALVFSAGGYTGNFFHDFNDGFIPLFITVNSFYQNQDFILVVSTARDWWISKYKHVLQGFSKHRIINLENDTSTHCFPSATLGLISHGYLTIDPNLMPTSKTLTHFRSFLAQAIEQHIPPTTHPSTSTSTSMIRPRLILLSRKSPVGRVLLNEAALKNLAETIGFVVTLFIPSTKIPLTDTYNIINSSQVVVGVHGAGMTHLLFMRRGSVLVQVVPLGTEWAAKVCYGEPAWAMGLEYMEYRVRANESSLIEKYGEEEEIIKNPRAYRGKNWSLMNVYLKEQNVRLDLIRFKEYLEEAYRKAKKLMENGAL 411
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 19094764 19095999 + Bpe011049.1 Bpe13g01388 114168

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g01388 411 PANTHER GLYCOSYLTRANSFERASE 17 407 - -
Bpe13g01388 411 Pfam Glycosyltransferase 61 202 312 IPR007657 GO:0016757
Bpe13g01388 411 PANTHER GLYCOSYLTRANSFERASE 17 407 IPR007657 GO:0016757
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g01388 - - - jre:109002887 465.307
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00653 Bpe-Chr2:4281471 Bpe13g01388 Bpe-Chr13:19094764 8.66E-87 dispersed
Bpe04g00579 Bpe-Chr4:3706006 Bpe13g01388 Bpe-Chr13:19094764 3.17E-88 dispersed
Bpe13g01388 Bpe-Chr13:19094764 Bpe15g00535 Bpe-Chr15:16496196 3.22E-78 dispersed
Bpe13g01388 Bpe-Chr13:19094764 Bpe13g01389 Bpe-Chr13:19098389 2.61E-160 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g984 Blo01g00392 Blo16g01097 . Bda11g01191 Bpe13g01388 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bda11g01191 . . . Bma06g00724 . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002716 7 0 2 6 5 1 2 1 1 1 1 1 2 1 1 2 1 5 2 1 1 1 1 1 1 1 2 2 2 2 57