Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g01395 AAGCAAATGAGGAAGCATGGATGGCAACTCCCTTATCATCCCCTTCAGGTTGTGGCTGTTGCTGTATTTCTGGCTTTGGGGTTTGCTTTCTATGTGTTCTTTGCTCCTTTTATTGGGAGGAAACCGTTTCAGTACATTGTCATTGGGCTGTACACTCCTCTTATTGCATGTGTGTTTGGTCTCTACATTTGGTGTGCGGCAGCTGATCCAGCCGATTTCGGAGTTTTCAAGTCCAAGAAATATCTCAATATTCCGGATAGTGGAAAGAGTTTGCAGTCGAAAGATTCCAAACTTTCTGGCGAATCAAAACCATCGATTCATAATCCTAATGCCCTGGCTGCTGAAGGGAAAGCTCAAGATGGATATACTAATGAAAAATCTGGGTCCCCAGCGGAAATCAAGAAGAAGGGTAGTAGTCCACCGAAGAGGTCATCTTATTTTCTATTGGCGTTCTCTCCTTGTGCTTTTATCCATAACTGCATTGCCTCTAAATGGGAAACTTCGGATGGAGAAACAAGTGAAGATGGCACGTTTTTCTGCAGTTTGTGCGAAGTAGAGGTTTATAAATGCAGCAAACATTGCCGGGTTTGTGACAAATGCGTTGATCATTTTGATCATCACTGCCGGTGGCTTAACAATTGTATTGGGAGAAAGAATTATCGACAGTTTTTCACTCTTATGGTAACTTCCCTCCTCTTGCCGACTTCCATCGCTAAATGTATTACTATTTGTGTGTACATCGTTTGGTTGTGCACATTGGGGTTGAGATTGCAGCTAATCGTACAATGGACGACTGGAATTGTTGTGCTAGTTTTCTGTTTCCTCGAGAAGAAAAGGTTCTCTGCCGATATCTCTTCGAAGCTAGGCAGCAGCTTTTCGATGGCCCCTTTCGTTATTGTAGTGGTTGTATGTACCATTTTGGCGATGATAGCGACCCTGCCTCTTGCCCAACTTTTCTTTTTTCACATCCTCCTCATCAAAAAGGGAATTAGCACATATGATTACATCATATATTTGAGGGAGCTAGAGCAAGAACAGGTGGGAGGAACTGGTCAGCAAAGTCCTCCAATGTCAGTAGCCAGTTCCCTAACTGGACTGAGTAGTACAAGTTCCTTCACTAATTTCAACCGAGCAGTTTGGTGTACGCCTCCTCGGTTGTTCCTAGAAGACCAGTTTGATGTTGTTCCACCGGAAACCGGCTCTGTTAGTTCGTTTGGGAAGAACATGGCCATGGAGGAGTCAGGTAAGAAAAAAAATCCTCCAATGGTGAAGATTAGCCCGTGGAATCTGGCTCGAATGAATGCAGAGGAGGCTTCAAAAGCAGCTGCTGAGGCTCGGAAGAAGTCCAAAATTCTGCAGCCTGTGGCAAGAACGGGCACGGTCGATAGTGGTCTTGGCAGCAGTGGCCTGCGAATGGTGCCAAGGCCGGAGAACAACAGAAGGCGATCGAACAAACGGGTTCGACTTCCGGCCGACCTAACGATGGATCCGATGTCAAAACTTCCGGCAAAAGCAGTTGATAATGCTTTAGCTCCACTGCAGCTCGAAGCTAGAAGTGCTTTTCAAACTAGCAGAGGAATGTCGAGTTCTGCTGGAATTATTGCATCTTCGCCGGAGAGCAGTATGGATTCACCAGACATCCACCCGTTTCGGGCCTCATCGTCCGGAGCTGAAGAGTCAAGGCGGCTGATGGATCTCCGATTGGCTGGAGCAGCTGCGGAGAAGGGGATTCCTTTTTCGAGGTCAACAAGTGATGGGTACGAGCCTTCAGGCGGAGAAGACAGTGATCAAGTTCCGTCCAGAATTATTCAAAGATCAACTGATTGGAGTAACATGTTTGGGTCAGGTCAGGCAGATTTGAGAAAATTGTGA 1872 46.21 KQMRKHGWQLPYHPLQVVAVAVFLALGFAFYVFFAPFIGRKPFQYIVIGLYTPLIACVFGLYIWCAAADPADFGVFKSKKYLNIPDSGKSLQSKDSKLSGESKPSIHNPNALAAEGKAQDGYTNEKSGSPAEIKKKGSSPPKRSSYFLLAFSPCAFIHNCIASKWETSDGETSEDGTFFCSLCEVEVYKCSKHCRVCDKCVDHFDHHCRWLNNCIGRKNYRQFFTLMVTSLLLPTSIAKCITICVYIVWLCTLGLRLQLIVQWTTGIVVLVFCFLEKKRFSADISSKLGSSFSMAPFVIVVVVCTILAMIATLPLAQLFFFHILLIKKGISTYDYIIYLRELEQEQVGGTGQQSPPMSVASSLTGLSSTSSFTNFNRAVWCTPPRLFLEDQFDVVPPETGSVSSFGKNMAMEESGKKKNPPMVKISPWNLARMNAEEASKAAAEARKKSKILQPVARTGTVDSGLGSSGLRMVPRPENNRRRSNKRVRLPADLTMDPMSKLPAKAVDNALAPLQLEARSAFQTSRGMSSSAGIIASSPESSMDSPDIHPFRASSSGAEESRRLMDLRLAGAAAEKGIPFSRSTSDGYEPSGGEDSDQVPSRIIQRSTDWSNMFGSGQADLRKL 623
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 19170519 19174160 + Bpe011056.1 Bpe13g01395 114175

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g01395 623 MobiDBLite consensus disorder prediction 597 614 - -
Bpe13g01395 623 ProSiteProfiles DHHC domain profile. 178 228 - -
Bpe13g01395 623 PANTHER S-ACYLTRANSFERASE 10 533 - -
Bpe13g01395 623 MobiDBLite consensus disorder prediction 459 486 - -
Bpe13g01395 623 Coils Coil 616 623 - -
Bpe13g01395 623 MobiDBLite consensus disorder prediction 88 106 - -
Bpe13g01395 623 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 10 533 - -
Bpe13g01395 623 MobiDBLite consensus disorder prediction 521 543 - -
Bpe13g01395 623 Pfam DHHC palmitoyltransferase 176 337 IPR001594 GO:0016409
Bpe13g01395 623 MobiDBLite consensus disorder prediction 88 140 - -
Bpe13g01395 623 MobiDBLite consensus disorder prediction 521 558 - -
Bpe13g01395 623 MobiDBLite consensus disorder prediction 574 623 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g01395 K20027 ZDHHC1_11; palmitoyltransferase ZDHHC1/11 [EC:2.3.1.225] - csv:105434394 801.971
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00958 Bpe-Chr8:11968941 Bpe13g01395 Bpe-Chr13:19170519 1.13E-59 dispersed
Bpe10g00745 Bpe-Chr10:13769095 Bpe13g01395 Bpe-Chr13:19170519 9.07E-52 dispersed
Bpe11g00412 Bpe-Chr11:3142276 Bpe13g01395 Bpe-Chr13:19170519 5.57E-87 dispersed
Bpe13g01395 Bpe-Chr13:19170519 Bpe11g01478 Bpe-Chr11:10993917 1.38E-13 dispersed
Bpe13g01395 Bpe-Chr13:19170519 Bpe02g02327 Bpe-Chr2:23877524 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g945 . . . . Bpe13g01395 . . . Cmo04g01650 . . . Car04g01628 . Sed08g1575 . Cpe01g01400 Bhi07g01449 Tan04g0961 Cmetu10g1342 Lac13g0407 Hepe10g1818 . . . . . . . . . Cone13ag0930 Cone19ag0923 Cone6ag0559 Cone9ag0566 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005335 2 1 2 1 2 1 2 1 1 1 1 1 2 1 1 1 1 4 2 1 1 1 1 1 1 1 1 2 1 1 40