Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g01399 AAGGAGAAGCACAAGGAGAAAGCTCGAGTGAGCAGAACGTCGCTGATATTGTGGCACGCTCATCAGAATGACACCGCTGCGGTTCGCAAGCTGTTGGAGGAAGATCGATCTCTGGTCCAAGCTAGAGACTACGATAGTCGCACTCCTCTTCATGTCGCTTCACTCCATGGTTGGATCGATGTCGCCAAGTGCTTGATTGAGTACGGTGCTGATGTTAACGCCCAGGATCGCTGGAAGAACACTCCTCTAGCTGATGCGGAAGGAGCTAAAAAGCAAGTGATGGTTGAGCTTTTGAAGTCATTTGGGGGTCTGTCTTATGGCCAAAATGGAAGCCACTTTGAACCAAAACCTGTACCTCCTCCTCTATCCAACAAGTGTGATTGGGAAATTGATCCTTCTGAACTGGACTTCTCAAATGCATATATTATTGGCAAGGGTTCTTTTGGAGAGATATTAAAAGCTTATTGGCGTGGAACTCCAGTAGCTGTCAAACGCATTCTTCCTTCTCTGTCAGATGATAGATTGGTGATTCAAGACTTTAGGCATGAAGTTAATTTGCTGGTGAAGCTTCGACATCCAAATGTAGTCCAATTTCTAGGTGCTGTCACAGAGAAGAAGCCTCTTATGTTGATTACTGAATATTTAAGAGGGGGGGATCTTCATCAGTACCTGAAAGACAAAGGTTCACTAAGTAGCTCAGCAGCCATCAATTTTGCATTGGATATGGCTAGAGGCATGGCTTATCTTCACAATGAACCTAATGTCATTGTTCATCGAGACTTAAAACCAAGGAATGTGCTTTTAGTCAATTCTGGTGCTGACCATTTAAAGGTTGGAGATTTTGGTCTAAGCAAGCTTATTAAGGTTCAGAATTCTCACGATGTGTACAAGATGACTGGGGAGACTGGAAGCTATCGATATATGGCTCCAGAAGTTTTCAAGCACCGGAAATATGACAAGAAAGTTGATGTTTTCTCTTTTGCAATGATTCTGTATGAGATGCTTGAAGGGGAGCCACCTTTTGCTGGTTACGAGCCTTACGAGGCAGCCAAATATGTTGCAGATGGAAATAGACCTCCTTTTCGTGCAAAAGGATTCATCTCTGAACTGAAAGAATTAACAGAGCAATGTTGGGCTGCTGATATGAATCAAAGGCCATCCTTCTTGGAAATCCTCAAGAAACTTGAAAAGATCAAGGAGAACCTGCCGCCGGAGCATCACTGGACCTTATTCAATTCC 1239 43.74 KEKHKEKARVSRTSLILWHAHQNDTAAVRKLLEEDRSLVQARDYDSRTPLHVASLHGWIDVAKCLIEYGADVNAQDRWKNTPLADAEGAKKQVMVELLKSFGGLSYGQNGSHFEPKPVPPPLSNKCDWEIDPSELDFSNAYIIGKGSFGEILKAYWRGTPVAVKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNVVQFLGAVTEKKPLMLITEYLRGGDLHQYLKDKGSLSSSAAINFALDMARGMAYLHNEPNVIVHRDLKPRNVLLVNSGADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPFAGYEPYEAAKYVADGNRPPFRAKGFISELKELTEQCWAADMNQRPSFLEILKKLEKIKENLPPEHHWTLFNS 413
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 19223914 19229272 + Bpe025293 Bpe13g01399 114179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g01399 413 ProSiteProfiles Ankyrin repeat profile. 45 77 IPR002110 GO:0005515
Bpe13g01399 413 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 2 405 - -
Bpe13g01399 413 PIRSF ILK 1 413 - -
Bpe13g01399 413 SUPERFAMILY Protein kinase-like (PK-like) 136 408 IPR011009 -
Bpe13g01399 413 Pfam Ankyrin repeats (3 copies) 12 76 IPR002110 GO:0005515
Bpe13g01399 413 PRINTS Tyrosine kinase catalytic domain signature 366 388 IPR001245 GO:0004672|GO:0006468
Bpe13g01399 413 PRINTS Tyrosine kinase catalytic domain signature 212 225 IPR001245 GO:0004672|GO:0006468
Bpe13g01399 413 PRINTS Tyrosine kinase catalytic domain signature 250 268 IPR001245 GO:0004672|GO:0006468
Bpe13g01399 413 Gene3D Phosphorylase Kinase; domain 1 121 216 - -
Bpe13g01399 413 CDD STKc_MAP3K-like 143 395 - -
Bpe13g01399 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 256 268 IPR008271 GO:0004672|GO:0006468
Bpe13g01399 413 SMART serkin_6 137 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe13g01399 413 ProSiteProfiles Protein kinase domain profile. 137 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe13g01399 413 Gene3D - 1 110 IPR036770 -
Bpe13g01399 413 Gene3D Transferase(Phosphotransferase) domain 1 217 408 - -
Bpe13g01399 413 PANTHER SERINE/THREONINE-PROTEIN KINASE STY8-LIKE 2 405 - -
Bpe13g01399 413 SMART ANK_2a 45 74 IPR002110 GO:0005515
Bpe13g01399 413 ProSitePatterns Protein kinases ATP-binding region signature. 143 164 IPR017441 GO:0005524
Bpe13g01399 413 ProSiteProfiles Ankyrin repeat region circular profile. 45 77 - -
Bpe13g01399 413 SUPERFAMILY Ankyrin repeat 16 102 IPR036770 -
Bpe13g01399 413 Pfam Protein tyrosine and serine/threonine kinase 142 395 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g01118 Bpe-Chr11:8348827 Bpe13g01399 Bpe-Chr13:19223914 4.12E-99 dispersed
Bpe13g01399 Bpe-Chr13:19223914 Bpe15g00080 Bpe-Chr15:8520551 1.37E-85 dispersed
Bpe15g00991 Bpe-Chr15:19439824 Bpe13g01399 Bpe-Chr13:19223914 5.29E-14 transposed
Bpe10g00886 Bpe-Chr10:14610245 Bpe13g01399 Bpe-Chr13:19223914 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63692 PF07714 PK_Tyr_Ser-Thr 8.60E-65 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g01399 - - csv:101215575 777.319