Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe13g01399 | AAGGAGAAGCACAAGGAGAAAGCTCGAGTGAGCAGAACGTCGCTGATATTGTGGCACGCTCATCAGAATGACACCGCTGCGGTTCGCAAGCTGTTGGAGGAAGATCGATCTCTGGTCCAAGCTAGAGACTACGATAGTCGCACTCCTCTTCATGTCGCTTCACTCCATGGTTGGATCGATGTCGCCAAGTGCTTGATTGAGTACGGTGCTGATGTTAACGCCCAGGATCGCTGGAAGAACACTCCTCTAGCTGATGCGGAAGGAGCTAAAAAGCAAGTGATGGTTGAGCTTTTGAAGTCATTTGGGGGTCTGTCTTATGGCCAAAATGGAAGCCACTTTGAACCAAAACCTGTACCTCCTCCTCTATCCAACAAGTGTGATTGGGAAATTGATCCTTCTGAACTGGACTTCTCAAATGCATATATTATTGGCAAGGGTTCTTTTGGAGAGATATTAAAAGCTTATTGGCGTGGAACTCCAGTAGCTGTCAAACGCATTCTTCCTTCTCTGTCAGATGATAGATTGGTGATTCAAGACTTTAGGCATGAAGTTAATTTGCTGGTGAAGCTTCGACATCCAAATGTAGTCCAATTTCTAGGTGCTGTCACAGAGAAGAAGCCTCTTATGTTGATTACTGAATATTTAAGAGGGGGGGATCTTCATCAGTACCTGAAAGACAAAGGTTCACTAAGTAGCTCAGCAGCCATCAATTTTGCATTGGATATGGCTAGAGGCATGGCTTATCTTCACAATGAACCTAATGTCATTGTTCATCGAGACTTAAAACCAAGGAATGTGCTTTTAGTCAATTCTGGTGCTGACCATTTAAAGGTTGGAGATTTTGGTCTAAGCAAGCTTATTAAGGTTCAGAATTCTCACGATGTGTACAAGATGACTGGGGAGACTGGAAGCTATCGATATATGGCTCCAGAAGTTTTCAAGCACCGGAAATATGACAAGAAAGTTGATGTTTTCTCTTTTGCAATGATTCTGTATGAGATGCTTGAAGGGGAGCCACCTTTTGCTGGTTACGAGCCTTACGAGGCAGCCAAATATGTTGCAGATGGAAATAGACCTCCTTTTCGTGCAAAAGGATTCATCTCTGAACTGAAAGAATTAACAGAGCAATGTTGGGCTGCTGATATGAATCAAAGGCCATCCTTCTTGGAAATCCTCAAGAAACTTGAAAAGATCAAGGAGAACCTGCCGCCGGAGCATCACTGGACCTTATTCAATTCC | 1239 | 43.74 | KEKHKEKARVSRTSLILWHAHQNDTAAVRKLLEEDRSLVQARDYDSRTPLHVASLHGWIDVAKCLIEYGADVNAQDRWKNTPLADAEGAKKQVMVELLKSFGGLSYGQNGSHFEPKPVPPPLSNKCDWEIDPSELDFSNAYIIGKGSFGEILKAYWRGTPVAVKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNVVQFLGAVTEKKPLMLITEYLRGGDLHQYLKDKGSLSSSAAINFALDMARGMAYLHNEPNVIVHRDLKPRNVLLVNSGADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPFAGYEPYEAAKYVADGNRPPFRAKGFISELKELTEQCWAADMNQRPSFLEILKKLEKIKENLPPEHHWTLFNS | 413 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 19223914 | 19229272 | + | Bpe025293 | Bpe13g01399 | 114179 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe13g01399 | 413 | ProSiteProfiles | Ankyrin repeat profile. | 45 | 77 | IPR002110 | GO:0005515 | |
Bpe13g01399 | 413 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 2 | 405 | - | - | |
Bpe13g01399 | 413 | PIRSF | ILK | 1 | 413 | - | - | |
Bpe13g01399 | 413 | SUPERFAMILY | Protein kinase-like (PK-like) | 136 | 408 | IPR011009 | - | |
Bpe13g01399 | 413 | Pfam | Ankyrin repeats (3 copies) | 12 | 76 | IPR002110 | GO:0005515 | |
Bpe13g01399 | 413 | PRINTS | Tyrosine kinase catalytic domain signature | 366 | 388 | IPR001245 | GO:0004672|GO:0006468 | |
Bpe13g01399 | 413 | PRINTS | Tyrosine kinase catalytic domain signature | 212 | 225 | IPR001245 | GO:0004672|GO:0006468 | |
Bpe13g01399 | 413 | PRINTS | Tyrosine kinase catalytic domain signature | 250 | 268 | IPR001245 | GO:0004672|GO:0006468 | |
Bpe13g01399 | 413 | Gene3D | Phosphorylase Kinase; domain 1 | 121 | 216 | - | - | |
Bpe13g01399 | 413 | CDD | STKc_MAP3K-like | 143 | 395 | - | - | |
Bpe13g01399 | 413 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 256 | 268 | IPR008271 | GO:0004672|GO:0006468 | |
Bpe13g01399 | 413 | SMART | serkin_6 | 137 | 399 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe13g01399 | 413 | ProSiteProfiles | Protein kinase domain profile. | 137 | 409 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe13g01399 | 413 | Gene3D | - | 1 | 110 | IPR036770 | - | |
Bpe13g01399 | 413 | Gene3D | Transferase(Phosphotransferase) domain 1 | 217 | 408 | - | - | |
Bpe13g01399 | 413 | PANTHER | SERINE/THREONINE-PROTEIN KINASE STY8-LIKE | 2 | 405 | - | - | |
Bpe13g01399 | 413 | SMART | ANK_2a | 45 | 74 | IPR002110 | GO:0005515 | |
Bpe13g01399 | 413 | ProSitePatterns | Protein kinases ATP-binding region signature. | 143 | 164 | IPR017441 | GO:0005524 | |
Bpe13g01399 | 413 | ProSiteProfiles | Ankyrin repeat region circular profile. | 45 | 77 | - | - | |
Bpe13g01399 | 413 | SUPERFAMILY | Ankyrin repeat | 16 | 102 | IPR036770 | - | |
Bpe13g01399 | 413 | Pfam | Protein tyrosine and serine/threonine kinase | 142 | 395 | IPR001245 | GO:0004672|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe11g01118 | Bpe-Chr11:8348827 | Bpe13g01399 | Bpe-Chr13:19223914 | 4.12E-99 | dispersed | |
Bpe13g01399 | Bpe-Chr13:19223914 | Bpe15g00080 | Bpe-Chr15:8520551 | 1.37E-85 | dispersed | |
Bpe15g00991 | Bpe-Chr15:19439824 | Bpe13g01399 | Bpe-Chr13:19223914 | 5.29E-14 | transposed | |
Bpe10g00886 | Bpe-Chr10:14610245 | Bpe13g01399 | Bpe-Chr13:19223914 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
63692 | PF07714 | PK_Tyr_Ser-Thr | 8.60E-65 | CL0016 | Bpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe13g01399 | - | - | csv:101215575 | 777.319 |