Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g01405 CTTGAGCAGAATGATGAAGATGAGAAGAAGTCTGAAGCAAATGAAGAGGAGGTTGAACCAAATGTGAAGCCTGAAGCAACAGCGGCAAACGATGGTGAAGAGTTGTCAAAGAAACCAGACGCTGCAGCCTCTGAGACAAAGATGATTGTTGATAACGAAGAATCAAAAACAAAAGCTGCCAAGCCAGAGATAAAGAAGAAAGAAGTTTCTTCTCTAAAGGAGGTTGCTGTCGATAAAGAGCTGCTACAGGCTTTTAGATTTTTTGACCGGAATCGAGTCGGCTATATTAGGGTTGAAGATATGAGGTTGATCGTTCACAACTTGGGAAAGTTTCTTTCTCACAGGGATGTGAAGGAACTGGTGCAAAGTGCATTGCTCGAGAGCAGCACTGGAAGAGACGATCGGATTCTCTATAATAAGCTGGTTCGAATGCCGCAAATT 441 43.08 LEQNDEDEKKSEANEEEVEPNVKPEATAANDGEELSKKPDAAASETKMIVDNEESKTKAAKPEIKKKEVSSLKEVAVDKELLQAFRFFDRNRVGYIRVEDMRLIVHNLGKFLSHRDVKELVQSALLESSTGRDDRILYNKLVRMPQI 147
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 19278471 19279230 - Bpe025294 Bpe13g01405 114185

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g01405 147 ProSiteProfiles EF-hand calcium-binding domain profile. 76 111 IPR002048 GO:0005509
Bpe13g01405 147 PANTHER CCAR1 HOMOLOG 5 144 - -
Bpe13g01405 147 Gene3D - 34 146 - -
Bpe13g01405 147 MobiDBLite consensus disorder prediction 1 64 - -
Bpe13g01405 147 MobiDBLite consensus disorder prediction 1 22 - -
Bpe13g01405 147 SUPERFAMILY EF-hand 79 124 IPR011992 -
Bpe13g01405 147 MobiDBLite consensus disorder prediction 47 64 - -
Bpe13g01405 147 PANTHER CELL DIVISION CYCLE AND APOPTOSIS REGULATOR PROTEIN 5 144 IPR025224 GO:0006355
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g01405 K25827 CCAR1; cell division cycle and apoptosis regulator protein 1 - qsu:112005584 155.606
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe13g01405 Bpe-Chr13:19278471 Bpe04g01352 Bpe-Chr4:20049603 9.50E-07 dispersed
Bpe13g01405 Bpe-Chr13:19278471 Bpe01g00341 Bpe-Chr1:2148301 4.42E-07 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g936 . Blo16g01111 . . Bpe13g01405 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone6ag0569 Cone9ag0575 . . . . . . . . . . . Bma06g00700 . . . . . . . . Cpe07g00648 . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007311 0 1 1 1 1 1 2 1 1 1 1 1 2 1 2 2 1 2 1 1 1 1 1 2 1 1 0 1 1 1 34