Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g01449 ATCATGTCCGTCTCGTGCTTGGATTGCTTCTCCGACCTACTCTGCGATGAGGACTCGTCGGAAATATTGTCAGAACAGTCTCCTGGAAACTCGACGGAACTTGAATCTCCGCCTTACATCGAGGAATCGATCGCCGGATTCATTGAAAATGAGACCCAGCTCTTAGAAGAGGATTGTTTATCGGGTTTTCAATCACAGTGGCTTGAGGCTTCTTCAAGAGCAGAGTCTGTTGCATGGATTCTCAAGGTTCAAGATCATTATGGCCTTCAACCAGTGACGGCGTACCTCTCCGTCAACTACCTGGATCGGTTCCTATATTCTCGCCGCTTGCCGCAAACAAATGGCTGGCCGATGCAACTCCTCTCTGTTGCTTGTCTGTCACTGGCTGCTAAAATGGAGGAAACACTGCCTCTTTCTTTATTGGATCTGCAGGTTGAGGGAGCGAAATACATATTCGAACCTAAAACGATATTCAGGATGGAGCTCCTCGTGCTAAGGGTTTTAGAATGGCGATTACGATCCATAACGCCATTCAGCTTCATCAGTTTCTTCGCATGCAAGCTCGACCCGACGGCAACTTTTATGGGATTTCTGATTTCACGAGCTAAGGAAATTATCCTGTCTAATATCCGAGAAGCTAGCTTTCTCGTATTCCGGCCATCGTGCATGGCTGTTGCGGCCTTACTCTGTGCAGCAAATGAAATTCCAAATTTGTCGCTTGAAAATCCTGAAGAAGCTGAGATGTGGTGCAAAGGGCTCAGCAAAGAAAAGATCATAGGCTGCTACCGGTTAATGCAAGAATCTCTCCTCCACAACCGCCGGAGATCGACGCCAGCGAAGATAATACCACAGCGCCTGCTGACAGCTATTCCGACAAGTTTCAGGTCCGATGATTCATCATCATCATCATCATCATCATCATCATCATCATCAGTCTTTTCGTCACCACATAAAAGGAGAAAACTAGGTAACTGCTGA 978 46.83 IMSVSCLDCFSDLLCDEDSSEILSEQSPGNSTELESPPYIEESIAGFIENETQLLEEDCLSGFQSQWLEASSRAESVAWILKVQDHYGLQPVTAYLSVNYLDRFLYSRRLPQTNGWPMQLLSVACLSLAAKMEETLPLSLLDLQVEGAKYIFEPKTIFRMELLVLRVLEWRLRSITPFSFISFFACKLDPTATFMGFLISRAKEIILSNIREASFLVFRPSCMAVAALLCAANEIPNLSLENPEEAEMWCKGLSKEKIIGCYRLMQESLLHNRRRSTPAKIIPQRLLTAIPTSFRSDDSSSSSSSSSSSSSVFSSPHKRRKLGNC 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 19750201 19752246 + Bpe011113.1 Bpe13g01449 114229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g01449 325 Pfam Cyclin, N-terminal domain 47 172 IPR006671 -
Bpe13g01449 325 Gene3D - 56 173 - -
Bpe13g01449 325 ProSitePatterns Cyclins signature. 73 104 IPR006671 -
Bpe13g01449 325 SMART cyclin_7 78 166 IPR013763 -
Bpe13g01449 325 Gene3D - 51 237 - -
Bpe13g01449 325 SUPERFAMILY Cyclin-like 36 172 IPR036915 -
Bpe13g01449 325 SMART Cyclin_C_2 175 308 IPR004367 -
Bpe13g01449 325 Pfam Cyclin, C-terminal domain 175 276 IPR004367 -
Bpe13g01449 325 PANTHER CYCLINS 4 307 IPR039361 -
Bpe13g01449 325 PANTHER CYCLIN-D1-1 4 307 - -
Bpe13g01449 325 CDD CYCLIN 72 165 IPR013763 -
Bpe13g01449 325 MobiDBLite consensus disorder prediction 293 325 - -
Bpe13g01449 325 MobiDBLite consensus disorder prediction 293 317 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe10g00825 Bpe-Chr10:14275298 Bpe13g01449 Bpe-Chr13:19750201 1.07E-132 dispersed
Bpe11g01736 Bpe-Chr11:13729051 Bpe13g01449 Bpe-Chr13:19750201 7.09E-126 dispersed
Bpe13g01449 Bpe-Chr13:19750201 Bpe14g00477 Bpe-Chr14:4237740 3.55E-56 dispersed
Bpe02g00862 Bpe-Chr2:6504759 Bpe13g01449 Bpe-Chr13:19750201 1.07E-26 transposed
Bpe13g00484 Bpe-Chr13:12274041 Bpe13g01449 Bpe-Chr13:19750201 1.38E-153 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g01449 K18810 - fve:101292695 400.593