Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g01458 ATGAAATTTCTCCGAGATTCATCCAATCCTCGTAAAGTTCTTCTATTTTCAGTAAAAAAGACCTCTTTTTCAGTTTTGCTCATCTCCTCTATTTTTTTTTCTTCCGTCTTTAACATAAATATATATAAGTTTTTTTGCATGAAAGCTTCCTCTTTTCTTTGGTTAGGTAGAAGTCATTATGCACGTGGAACAGCAGGAAGATACAGCACGGAGGCGGCCATTGAAGAGCCTATTAATCCTGCTGTCAACGTCAATTACACTCGGCTTCTGATCAACGGCCAGTTTGTCGATTCTGCTTCCGGTAGTCTTCCGATGGAAAACGTTTCGGACCCGAGGACCGGTGATGTCATCGCCCATGTTGCAGAGGGAGACGCCGAAGACATTGATCGAGCTGTGTCGGCCGCTCGCCGAGCATTTGACGAGGGTCCATGGCCGAAGATGACTGCTTATGAACGATCTCGGATTATTCTGCGGTTCGCCGATTTACTTGAGAAGCACAACGATGAAATTGCAGCTCTTGAAACTTGGGATAATGGGAAGCCTTATGAACAATCTGCTAAAGTCGAAGTTCCGATGTTTGTACGTCTGTTCCGGTACTATGGAGGTTGGCCGGATAAGATTCACGGCCTTACAGTTCCGGCCGACGGCTCTCACCATGTTCAAATCTTGCACGAACCGATCGGCGTTGTGGGTCAGATTATCCCGTGGAATTTTCCTCTTCTCATGTATGCATGGAAGGTCGGGCCGGCGTTGGCCTGCGGAAACACCATTGTTCTGAAAACAGCTGAGCAGACTCCATTGTCGGCTCTGTTCGTAACTAAGTTATTGCATGAGGCCGGACTTCCTGACGGCGTGCTTAATATTGTTTCTGGGTTTGGCGCGACGGCCGGAGCTGCTCTAGCCAGTCATATGGATGTAGACAAGCTTGCATTCACTGGATCGACTGAAACCGGTAAAGTCATACTTGGATTGTCAGCGGAAAGCAATCTTAAGCCAGTCACTTTAGAACTTGGTGGGAAATCCCCTTTTATCATATGTGAGGATGCTGATGTCGACGAAGCCGTTGAGCTGGCTCATTTTGCTCTATTTTTTAATCAAGGACAATGCTGCTGTGCCGGTTCTCGTACTTTTGTACACGAAAGCGTGTATGACGAGTTTTTGGGGAAAGCAAAGGAGCGGGCTCGGACACGAGCAGTTGGCGATCCGTTCAAGGGTGGTATTGAACAAGGACCTCAGATTGATTCAAAGCAATTTGACAAGATTCTCAAGTACATAAAATCTGGAGTTGAAAGTGGAGCTACTCTTGAAGCTGGAGGAGAGAGGCTTGGCTCAAAGGGCTATTATATCAAGCCTACTGTTTTCTCAAACGTTCAGGATGACATGTTGATAGCAAAAGATGAGATCTTTGGTCCAGTTCAAACGATTTTGAAGTTCAAAAAGCTTGATGAGGTTATCAAGAGGGCAAACGCGAGTCAATTCGGGCTGGCAGCTGGAATATTCACGAAGAACATCGACACGGCCAACACATTAACCCGAGCTTTGAGAGTAGGATCGGTGTGGATAAATTGTTTCGATATATTTGATGCCGCCATTCCATTTGGTGGGTATAAGATGAGTGGCCATGGAAGGGAAAAAGGCATATACAGCCTTAATAATTATCTGCAAGTCAAGGCAGTGGCCACTCCCTTGAAGAATCCTGCTTGGCTTTAG 1710 46.08 MKFLRDSSNPRKVLLFSVKKTSFSVLLISSIFFSSVFNINIYKFFCMKASSFLWLGRSHYARGTAGRYSTEAAIEEPINPAVNVNYTRLLINGQFVDSASGSLPMENVSDPRTGDVIAHVAEGDAEDIDRAVSAARRAFDEGPWPKMTAYERSRIILRFADLLEKHNDEIAALETWDNGKPYEQSAKVEVPMFVRLFRYYGGWPDKIHGLTVPADGSHHVQILHEPIGVVGQIIPWNFPLLMYAWKVGPALACGNTIVLKTAEQTPLSALFVTKLLHEAGLPDGVLNIVSGFGATAGAALASHMDVDKLAFTGSTETGKVILGLSAESNLKPVTLELGGKSPFIICEDADVDEAVELAHFALFFNQGQCCCAGSRTFVHESVYDEFLGKAKERARTRAVGDPFKGGIEQGPQIDSKQFDKILKYIKSGVESGATLEAGGERLGSKGYYIKPTVFSNVQDDMLIAKDEIFGPVQTILKFKKLDEVIKRANASQFGLAAGIFTKNIDTANTLTRALRVGSVWINCFDIFDAAIPFGGYKMSGHGREKGIYSLNNYLQVKAVATPLKNPAWL 569
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 19861523 19864162 + Bpe011123.1 Bpe13g01458 114238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g01458 569 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 56 569 - -
Bpe13g01458 569 SUPERFAMILY ALDH-like 84 563 IPR016161 GO:0016491
Bpe13g01458 569 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 108 559 IPR016162 GO:0016491
Bpe13g01458 569 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 341 530 IPR016163 GO:0016620
Bpe13g01458 569 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL-LIKE 56 569 - -
Bpe13g01458 569 CDD ALDH_F2BC 84 561 - -
Bpe13g01458 569 Pfam Aldehyde dehydrogenase family 107 559 IPR015590 GO:0016491
Bpe13g01458 569 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 335 342 IPR029510 GO:0016491
Bpe13g01458 569 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 363 374 IPR016160 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe12g00589 Bpe-Chr12:11666187 Bpe13g01458 Bpe-Chr13:19861523 0 dispersed
Bpe13g01081 Bpe-Chr13:16366936 Bpe13g01458 Bpe-Chr13:19861523 8.36E-179 dispersed
Bpe11g01767 Bpe-Chr11:14058782 Bpe13g01458 Bpe-Chr13:19861523 0 wgd
Bpe13g00492 Bpe-Chr13:12333457 Bpe13g01458 Bpe-Chr13:19861523 0 wgd
Bpe13g01458 Bpe-Chr13:19861523 Bpe07g00817 Bpe-Chr7:14464866 8.10E-111 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g01458 K00128 - vvi:100267386 868.611