Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g01469 ATGAATCTTCTCGGTGCCTCTTCGGTAGGTGAACTACTAAACTTTGCTGTTCTTCTTTCAAACCCCATAGAGAGCACGCGACTGGATGAATCGAGGCCGATCTCAAGGCCTCACATATATTTTCATACTGCATTTTATACAAAATCTAAAAACCTGAAAATGGGATCCGAAGGGCCAAAGGCTGCCACTATTTTTCATGTTACCGGGTTTAAAAAGTTTATGGGAGTTGCAGACAATCCGACGGAGACAATAGTAAAAAATTTGAAGGATTTTGTTGAAAAACGAGGTTTGCCTGCTGGAGTTACTCTTGGGAGCTGCAATGTTCTTGAGACTGCTGGAGATGGTGCCCTTACCACGCTTTACACTATCTTTGAATCAGGAATCTCAAATACAGATTCAACAACTAGCCAGCGGGTCATATGGCTTCACTTGGGGGTGAACAGTGGGGCAGCAGGATTTGCGATAGAGCGGCAGGCAGTGAATGAAGCAACCTTTTGCTGTCCAGATGAACTCGGATGGCAACCGATGTGCCTTCCCATAATTTCAGAGGATGGTGATATCCGCCAAAGAAGAAAGACAACTTGCTCTGTTGATTCAATACTGAAGATCTTGAAGGCTAAAAACTTTGATGTGGTTGGATCAGAGGATGCCGGCCGTTTTGTATGTAATTTTGTCTATTATCACTCTCTCCGTTTTGCGCAACAAAAGGGTCATAAATCTCTATTTGTCCACGTCCCTCTCTTTTCAACAATTGATGAAGAAACCCAGATGAGATTTGTTTCTTCCCTCTTTGAGGCTATTGCATCTACATGTTAG 816 43.14 MNLLGASSVGELLNFAVLLSNPIESTRLDESRPISRPHIYFHTAFYTKSKNLKMGSEGPKAATIFHVTGFKKFMGVADNPTETIVKNLKDFVEKRGLPAGVTLGSCNVLETAGDGALTTLYTIFESGISNTDSTTSQRVIWLHLGVNSGAAGFAIERQAVNEATFCCPDELGWQPMCLPIISEDGDIRQRRKTTCSVDSILKILKAKNFDVVGSEDAGRFVCNFVYYHSLRFAQQKGHKSLFVHVPLFSTIDEETQMRFVSSLFEAIASTC 271
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 19968159 19970609 - Bpe011133.1 Bpe13g01469 114249

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g01469 271 CDD Peptidase_C15 66 259 IPR000816 GO:0005829|GO:0006508|GO:0016920
Bpe13g01469 271 Gene3D - 63 270 IPR036440 -
Bpe13g01469 271 PANTHER PROTEASE FAMILY C15 PYROGLUTAMYL-PEPTIDASE I-RELATED 54 271 IPR016125 -
Bpe13g01469 271 Pfam Pyroglutamyl peptidase 67 248 IPR016125 -
Bpe13g01469 271 PANTHER BNAA09G31040D PROTEIN 54 271 - -
Bpe13g01469 271 SUPERFAMILY Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) 65 268 IPR036440 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g01469 K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3] - qsu:112034000 335.88
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bpe10g00842 Bpe13g01469 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00210 Bpe-Chr5:13412880 Bpe13g01469 Bpe-Chr13:19968159 8.09E-31 dispersed
Bpe10g00842 Bpe-Chr10:14374892 Bpe13g01469 Bpe-Chr13:19968159 6.21E-118 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g674 . . . Bda11g01272 Bpe13g01469 Bpe10g00842 . Bma15g00181 . Cmo18g00794 . Cma18g00792 . . . Cpe09g00510 Cpe01g01540 . . . . . . . Cla05g02551 Cam05g2739 . Cco05g2811 . Cmu05g2593 Cre05g2708 Cone13ag1049 Cone19ag1039 . . Lsi04g00559 Csa05g02327 . Cme10g00533 Blo06g00881 . . Bda11g01272 . . . Bma06g00616 . . . . . Car04g01774 . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002246 3 3 2 4 3 1 1 1 1 1 2 1 2 2 2 3 1 5 3 1 2 2 2 2 2 1 2 4 2 2 63