Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g01475 ATGAAATTGAAAGTGGTGTTTCTGGGTTTATTGGTTTTGTCAATGATGGAGTTGTCTTCTCCGACGCTGTCTCCTTCTGGTATAAACTATGAAGTTGTGGCATTGATGGCCATTAAAAATGATCTGATTGATCCACATCATGTTTTGGAAAATTGGGACATTAACTCTGTGGATCCTTGTGGATGGAGGATGGTGACTTGCTCTCCTGATGGATATGTCTCAGCTTTAGGGCTACCCAGTCAGAGCTTGTCTGGAACCTTATCTCCTGGAATTGGAAATCTCAGTAATCTGCACTCAGTGGACTTTTCTTTCAACAATCTCAGTGGTCCCTTGCCGAAAATATCAGCAAGAACTTTAAAAATTACAGGAAACCCTTTAATTTGTGGTCCAAACAACTGTTCGGGAGTGTATCCTGAGCCATCGTCATTAGCTCCGGATTCTCTGAAAGGGGAGTTAGAATCCCAAACAAAAAATCACCATGTTGCTGTTGCTTTCGGGGCTAGTTTCTGTTCTGCCTCTTTCTTTATAGCTTTTGTCGGACTTCTTGTTTGGTGGCGATACAGACGTAACAAGCAAATATTCTTTGATGTTAATGATCAACATGACCCTGAGGTATGCTTAGGCCATCTGAGAAGGTACTCGTTTAAGGAGCTCTGGGCAGCCACTGATCATTTCAATCCGACGAATATTTTGGGAAGAGGGGGATTTGGAATTGTGTACAAGGGAAGCTTGAATGATGGAACTCTGGTTGCTGTTAAACGGCTGAAAGACTACAACACCGCCGGTGGGGAAATCCAATTTCAGACCGAAGTGGAGACAATAAGTTTGGCTGTTCATAGAAATCTTCTCAGGCTATGTGGATTTTGTTCGAATGCAAATGAGCGCCTACTTGTTTATCCGTACATGCCCAATGGAAGTGTTGCCTCTCAATTGAGAGATCGCGTAAGTGGTTGTCCGGCTCTGGACTGGGGGAGACGGAAGAGAATAGCTTTAGGCACGGCTAGAGGGTTGGTATATTTACATGAGCAATGTGACCCGAAAATTATTCACCGTGACGTAAAAGCGGCTAACATATTGCTTGATGAAGATTTCGAGGCTTTAGTTGGAGATTTTGGGCTGGCGAAGCTTTTAGACCACAGAGATTCTCATGTCACAACAACGGTTCGTGGAACTGTTGGACACATTGCCCCCGAGTACTTATCGACTGGTCGATCATCGGAAAAGACTGATGTCTTTGGCTTCGGGATATTACTTCTCGAGCTTATTACTGGCAAGAAAGCTTTGGACTTGGGACGAGCAGCTAATCAGAAGGGCATCATGCTTGACTGGGTGAAAAAGCTGGACAAAGAGGGAAAGCTAAGTCAAATTGTGGACAAAGATCTTAAGACAAACTTCAAGATAAGTGAGTTGGAAGAGATGGTTCGAGTTGCATTGTTGTGTACTCAGTTTAATCCTCAGCACAGACCGACAATGTCGGAAGTGTTAAAGATGTTGGAAGGAGAGGACATGGCCGAGAAATCAGAGGCTTCACAGCAGGTCGGGACACCGAGATTTCGATCGAGTGAATATCGGACTCAAAGTTTACTCTTTTACTGCAATGTTTTCAAGCCTCCGGTTGGGAAAAGTGGTGTAGATTCTCTGTTTATTTCCTGGCCCTTTTCTTTTTCGACTGCTCCGGTTTCTACTTCTCGGGCCGGAAATGGCTCAGCGCCGGCGTCGGATTTGGAGAATCTGGACAATACATTGCAGTCAGAGATTTATAATGAGGGTAATGGTAGTACTAGCATTACGATGGATCAGATCCTACTAAAGAATCAAACGCAGGAATATGAAAAAAAAAAAGGAAGCTTTAACGCTCAAAATGCAAGTTGGCAGGCTAAATCCAGTGAAGTAGAGTTTAGAAATCGAAGCTCGATGGGTGAAGCTGGCAGTTACAATGGAAGTTTCAGCCTTTCTAGCAATTACAAGTGGAATGAGGAGGTAAGCAAGGGCGTACAGTTAGTCAATGAATCTAATTGTTTGAACTGTACAATCAGGGAGAATCAGAAAGGGCAAAACTTATCGGAAAATGGAGGAGTCTCGGCCGGGAAAATCAACTCTGAATTAACAGAAATCGTTTCCAACTCTAACCAGAAATGTGATCTCTTTGACGGTAGATGGGTGAGAGACGATACAAAGCCATATTACCCTCCTGGTTCTTGCCCTCTCATTGACAGAGACTTCGACTGCCACCTCAATCACAGGCCAGACGAAGGCTACGTGAAATGGAAATGGCAGCCCAACGGATGTGATCTCCCAAGTTTGAATGCGACGGATTTTTTGGAGAGATTAAGAGGGAAGAAGGTCGTTTTTGTTGGGGACTCGCTGAACCGGAACATGTGGGAGTCTTTGGACTACAATTGTTCGGTTGACTTTGTTAGCTCTCCGTTTCTTGTTCGCGAGTCATCCTTTAATGGCAAAAATGGATTGTTTGAGACGTTAAGATTGGATTTGATGGATCGAACTACTTCAATGTATAACGATGCTGATGTTCTAATCTTCAACACCGGCCATTGGTGGACTCACGAGAAAACTTCTCGAGGAGAAGATTATTACCAAGAAGGTGAATACCTTCATCCGAGGCTAAAGGTCCTCGAGGCTTATAAGAGGGCTCTTACTACATGGAGCCGTTGGATCGACGAAAACATCAATCCCAATCGAACAATAATTTTCTTCCGAGGGTATTCCCTTACCCATTTTAGAGGTGGGCTATGGAACTCAGGAGGACAGTGCCATAAAGAGGCAGATCCAATCTTCAATGAAAGTCAAGTTTTTAAGTATCCGACCAAAATGAGGGCTCTAGAGTATGTGTTGAAGGAGATGAAAACTCCAGTAATATACTTGAACATTAGTAGACAAACAGGGTACAGAAAAGATGGGCATCCTTCAATTTACAGAATGGAGTATCAGACGGAAGAAGAAAAGATTGCGGCCGAGCAATTGCAAGATTGCAGCCATTGGTGTTTGCCTGGAGTGCCTGATACGTGGAATGAGCTGTTGTATGCGTCTCTGTTGAAGGTCAGACATGGCCGATTATAA 3078 43.83 MKLKVVFLGLLVLSMMELSSPTLSPSGINYEVVALMAIKNDLIDPHHVLENWDINSVDPCGWRMVTCSPDGYVSALGLPSQSLSGTLSPGIGNLSNLHSVDFSFNNLSGPLPKISARTLKITGNPLICGPNNCSGVYPEPSSLAPDSLKGELESQTKNHHVAVAFGASFCSASFFIAFVGLLVWWRYRRNKQIFFDVNDQHDPEVCLGHLRRYSFKELWAATDHFNPTNILGRGGFGIVYKGSLNDGTLVAVKRLKDYNTAGGEIQFQTEVETISLAVHRNLLRLCGFCSNANERLLVYPYMPNGSVASQLRDRVSGCPALDWGRRKRIALGTARGLVYLHEQCDPKIIHRDVKAANILLDEDFEALVGDFGLAKLLDHRDSHVTTTVRGTVGHIAPEYLSTGRSSEKTDVFGFGILLLELITGKKALDLGRAANQKGIMLDWVKKLDKEGKLSQIVDKDLKTNFKISELEEMVRVALLCTQFNPQHRPTMSEVLKMLEGEDMAEKSEASQQVGTPRFRSSEYRTQSLLFYCNVFKPPVGKSGVDSLFISWPFSFSTAPVSTSRAGNGSAPASDLENLDNTLQSEIYNEGNGSTSITMDQILLKNQTQEYEKKKGSFNAQNASWQAKSSEVEFRNRSSMGEAGSYNGSFSLSSNYKWNEEVSKGVQLVNESNCLNCTIRENQKGQNLSENGGVSAGKINSELTEIVSNSNQKCDLFDGRWVRDDTKPYYPPGSCPLIDRDFDCHLNHRPDEGYVKWKWQPNGCDLPSLNATDFLERLRGKKVVFVGDSLNRNMWESLDYNCSVDFVSSPFLVRESSFNGKNGLFETLRLDLMDRTTSMYNDADVLIFNTGHWWTHEKTSRGEDYYQEGEYLHPRLKVLEAYKRALTTWSRWIDENINPNRTIIFFRGYSLTHFRGGLWNSGGQCHKEADPIFNESQVFKYPTKMRALEYVLKEMKTPVIYLNISRQTGYRKDGHPSIYRMEYQTEEEKIAAEQLQDCSHWCLPGVPDTWNELLYASLLKVRHGRL 1025
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 19998380 20006299 + Bpe011139.2 Bpe13g01475 114255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g01475 1025 SMART serkin_6 225 498 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe13g01475 1025 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 6 100 - -
Bpe13g01475 1025 ProSitePatterns Protein kinases ATP-binding region signature. 231 253 IPR017441 GO:0005524
Bpe13g01475 1025 SUPERFAMILY L domain-like 29 127 - -
Bpe13g01475 1025 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 99 528 - -
Bpe13g01475 1025 ProSiteProfiles Protein kinase domain profile. 225 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe13g01475 1025 SUPERFAMILY Protein kinase-like (PK-like) 202 499 IPR011009 -
Bpe13g01475 1025 Pfam PMR5 N terminal Domain 711 764 IPR025846 -
Bpe13g01475 1025 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Bpe13g01475 1025 Gene3D Phosphorylase Kinase; domain 1 194 301 - -
Bpe13g01475 1025 ProSitePatterns Serine/Threonine protein kinases active-site signature. 348 360 IPR008271 GO:0004672|GO:0006468
Bpe13g01475 1025 Gene3D Transferase(Phosphotransferase) domain 1 302 522 - -
Bpe13g01475 1025 Gene3D Ribonuclease Inhibitor 27 142 IPR032675 -
Bpe13g01475 1025 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 765 797 IPR026057 GO:0016740
Bpe13g01475 1025 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 798 1015 IPR026057 GO:0016740
Bpe13g01475 1025 Pfam Protein kinase domain 228 496 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe13g01475 1025 PANTHER PROTEIN NSP-INTERACTING KINASE 3 6 100 - -
Bpe13g01475 1025 PANTHER PROTEIN NSP-INTERACTING KINASE 3 99 528 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00569 Bpe-Chr4:3622677 Bpe13g01475 Bpe-Chr13:19998380 3.71E-121 dispersed
Bpe04g01451 Bpe-Chr4:21145536 Bpe13g01475 Bpe-Chr13:19998380 1.35E-128 dispersed
Bpe11g00143 Bpe-Chr11:1020526 Bpe13g01475 Bpe-Chr13:19998380 4.29E-90 dispersed
Bpe13g01475 Bpe-Chr13:19998380 Bpe15g00442 Bpe-Chr15:15880815 3.94E-09 dispersed
Bpe15g00364 Bpe-Chr15:15187026 Bpe13g01475 Bpe-Chr13:19998380 1.56E-135 transposed
Bpe13g00502 Bpe-Chr13:12415241 Bpe13g01475 Bpe-Chr13:19998380 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63696 PF00069 Pkinase 1.60E-43 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g01475 - - mnt:21410346 728.013