Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g01477 ATGGCTTCGGTTCAGCTCTGTTATCCGTCGTTGCGCACTGCACGTTTCCGGTGGACTCCGAGACTTGTTCAGTGCACTAGCGAACGCCAGGCCCTTTTTGGTCGCATTGCTCCTGTCTATGACAATTTGAACGATGTCTTGAGCTTGAGTCAGCATCGAATATGGAAAAGAATGGCAGTAGCGTGGAGTGGGCAAGTAACAAAAAGGGGAGATTGCGTTTTGGATGTGTGCTGTGGAAGTGGAGATTTAGTGTTCCTTTTGTCTGAGAAAGTTGGTTCAGATGGCAAGGTGATAGGCCTTGATTTCTCAAAGGAGCAACTGGAGATTGCAGCCTCTCGTCAACATTCCCTTTTCAAATCCTTTGATAATATAGAGTGGGTCGAAGGAGATGCGATGAATTTGCCATTTCCTGATGACTCTTTTGATGCTATTTCCATGGGGTACGGGCTTAGAAATGTAATGGATAAACAGAAAGCCATGAAAGAGATGCTTAGAGTTTTGAAATATGGTTCAAAAGTATCAATCCTTGACTTCAATAAAAGCACCCAACCTCTTATATCCTCACTTCAGGAATGGATGATCAGTAATATTGTCGTCCCTGTTGCATCTGGTTATGGCCTTACTCAGGAATATCAATATTTGACCAAGTCGATCAAAGAATTTTTAACAGGTAAAGAATTGGAGAACCTTGCACTGGAAGCTGGATTTTCTACTGCTGTTCATTACGAAATCAGCGGAGGCCTCATGGGTAATCTAGTAGCGACCAAGTAA 771 43.32 MASVQLCYPSLRTARFRWTPRLVQCTSERQALFGRIAPVYDNLNDVLSLSQHRIWKRMAVAWSGQVTKRGDCVLDVCCGSGDLVFLLSEKVGSDGKVIGLDFSKEQLEIAASRQHSLFKSFDNIEWVEGDAMNLPFPDDSFDAISMGYGLRNVMDKQKAMKEMLRVLKYGSKVSILDFNKSTQPLISSLQEWMISNIVVPVASGYGLTQEYQYLTKSIKEFLTGKELENLALEAGFSTAVHYEISGGLMGNLVATK 256
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 20049403 20051248 + Bpe011143.1 Bpe13g01477 114257

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g01477 256 CDD AdoMet_MTases 73 175 - -
Bpe13g01477 256 ProSitePatterns ubiE/COQ5 methyltransferase family signature 1. 40 55 IPR023576 GO:0008168
Bpe13g01477 256 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 24 247 IPR029063 -
Bpe13g01477 256 PANTHER METHYLTRANSFERASE 17 256 - -
Bpe13g01477 256 TIGRFAM MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 31 256 IPR004033 GO:0008168
Bpe13g01477 256 Gene3D Vaccinia Virus protein VP39 35 256 IPR029063 -
Bpe13g01477 256 Pfam ubiE/COQ5 methyltransferase family 30 254 IPR004033 GO:0008168
Bpe13g01477 256 Hamap 2-phytyl-1,4-naphtoquinone methyltransferase [menG]. 28 256 IPR032904 GO:0042372|GO:0052624
Bpe13g01477 256 ProSiteProfiles UbiE family SAM-binding methyltransferase profile. 24 256 IPR004033 GO:0008168
Bpe13g01477 256 PANTHER 2-PHYTYL-1,4-BETA-NAPHTHOQUINONE METHYLTRANSFERASE, CHLOROPLASTIC 17 256 - -
Bpe13g01477 256 Hamap Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 20 256 IPR004033 GO:0008168
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g01477 K23095 MENG, menG; demethylphylloquinol methyltransferase [EC:2.1.1.329] - twl:120007078 365.155
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g01040 Bpe-Chr8:12622526 Bpe13g01477 Bpe-Chr13:20049403 6.13E-09 dispersed
Bpe11g00228 Bpe-Chr11:1508101 Bpe13g01477 Bpe-Chr13:20049403 4.97E-07 dispersed
Bpe13g00374 Bpe-Chr13:11494964 Bpe13g01477 Bpe-Chr13:20049403 4.72E-07 dispersed
Bpe13g01160 Bpe-Chr13:17039868 Bpe13g01477 Bpe-Chr13:20049403 9.66E-06 dispersed
Bpe13g01477 Bpe-Chr13:20049403 Bpe06g00619 Bpe-Chr6:16996888 5.62E-07 dispersed
Bpe13g01477 Bpe-Chr13:20049403 Bpe11g00496 Bpe-Chr11:3822582 2.15E-09 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g658 . . . . Bpe13g01477 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006920 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 2 1 2 2 1 1 1 1 1 1 1 1 2 1 3 37