Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe13g01498 | ATGGAAAATGGGTTCTCTTCTCCCCGAAGCGATGCGTTTCCGGCCGGTCTCCGGGTTCTCGTCGTCGATGACGATCCAACTTGGCTCAAAATTCTCGAAAAGATGCTCAAGAAATGCTCTTACGAAGTGACAACATGTGCTCTAGCTAGGGAAGCACTAAATTTACTCCGAGAAAGGAAAGATGGATACGACATTGTAATCAGCGACGTCAACATGCCCGACATGGACGGCTTTAAACTTCTTGAGCATGTTGGTCTCGAGATGGATCTTCCCGTCATAATGATGTCTGTTGATGGAGAAACAAGTAGAGTCATGAAAGGCGTTCAACACGGAGCTTGTGACTATCTGCTCAAGCCGATAAGGATGAAAGAACTTAGAAATATATGGCAGCATGTGCTCAGAAAGAAGATACACGAGGTTCGGGAAATAGAAAGTCATGATTGTTTTGAAGGAATGTTTGGCCGAACCGGATCGGAGCAATTCGAGGATGGGCAATTTATTCGAGGAGAAGACATGAGTACTTTATTGAAGAAAAGGAAGGATTTTGATAAGCATGATGAGAAAGACATTGGTGATGCTTCTTCGATGAAAAAATCTCGAGTCGTTTGGTCCGTCGATCTTCATCAGAAATTTGTGAAAGCAGTGGATCAGATTGGTTTCCAAAGAGTAGGCCCCAAAAAAATACTTGATTTGATGAATGTGCCATGGCTGACAAGAGAAAATGTTGCTAGCCACTTGCAGAAGTATCGTCTTTACTTGAGTAGGCTGCAAAAGCAAAATGATGGAAAAGGTTGTGGTATGGGAACGAAGCCCTTCGATGTATCTTCAAATGCTCCAACACCAACTTCCTGCCTCCAAAACACGCTACATATGAATCAAAATGAAGCTCAAAATCTCAAACATCCCCTCCCCGGAAACAGCTTCCCTCTTCAGAAAGTCGATACGAAGGGACTTGATTGCAATTTGCAGAGGATTGTCTCCGAGCCTGCGCCAGAGCTCAAACGAGCGATGAGTTCTAGTCCTACGAATTCTAATAAGACCTGGAGCCATTCAGAACCGAATTTTGCAGCATCAGAGCAAACCCAGATTGAAGCTTTAGAAACCCAACTAAAGGCGGAAAGCAAAACGCTCATGGCTTTGAAAAGTGATTTCATCGATCTCCCACTGACGAATCCACAATCTAACTTCCAAGTTGATCAACTTCAATCCATTTCATCGATCGGTTCGAGACCTTCAATAGGAGAAGCGGAGATTACCAGCTCCATCACAACGGTTGGTTTAAATAAAGCGCAATATCTGTCCGACTCTTTTCCTGCTCAACATGGTATCGATGAAGTAAATCATCTTTTCAAACCACCCTCTTCAACTACGTCAATCGGGATGAAAAAGCAGGAACTCATCGAGAGCTGCCTATCCGAAACGGGAAGAGGGCTGCATTCGGACTTGTTTGACAATGACATGCAGCTTTGCTGGCTGCAAGAGGATTGCATTGTCAAGAATTTGGGGCAAAATATAGACTTGACAGATTGCAAAGATTCAGGGCTCATCACTGATTATATTGGACACGATTATTGGTACGATCCCACAGAATATATTCTGATAGATGATGGTATGTTCACATTATAA | 1626 | 43.42 | MENGFSSPRSDAFPAGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCALAREALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVLRKKIHEVREIESHDCFEGMFGRTGSEQFEDGQFIRGEDMSTLLKKRKDFDKHDEKDIGDASSMKKSRVVWSVDLHQKFVKAVDQIGFQRVGPKKILDLMNVPWLTRENVASHLQKYRLYLSRLQKQNDGKGCGMGTKPFDVSSNAPTPTSCLQNTLHMNQNEAQNLKHPLPGNSFPLQKVDTKGLDCNLQRIVSEPAPELKRAMSSSPTNSNKTWSHSEPNFAASEQTQIEALETQLKAESKTLMALKSDFIDLPLTNPQSNFQVDQLQSISSIGSRPSIGEAEITSSITTVGLNKAQYLSDSFPAQHGIDEVNHLFKPPSSTTSIGMKKQELIESCLSETGRGLHSDLFDNDMQLCWLQEDCIVKNLGQNIDLTDCKDSGLITDYIGHDYWYDPTEYILIDDGMFTL | 541 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 20363692 | 20366570 | + | Bpe011166.1 | Bpe13g01498 | 114278 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe13g01498 | 541 | CDD | REC_typeB_ARR-like | 19 | 133 | - | - | |
Bpe13g01498 | 541 | PIRSF | RR_ARR_type-B | 1 | 498 | IPR017053 | GO:0003677|GO:0003700|GO:0009736 | |
Bpe13g01498 | 541 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 195 | 254 | IPR017930 | - | |
Bpe13g01498 | 541 | Gene3D | - | 17 | 160 | - | - | |
Bpe13g01498 | 541 | Pfam | Myb-like DNA-binding domain | 200 | 250 | IPR001005 | - | |
Bpe13g01498 | 541 | MobiDBLite | consensus disorder prediction | 336 | 351 | - | - | |
Bpe13g01498 | 541 | SUPERFAMILY | Homeodomain-like | 196 | 255 | IPR009057 | - | |
Bpe13g01498 | 541 | Coils | Coil | 356 | 383 | - | - | |
Bpe13g01498 | 541 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 2 | 507 | IPR045279 | GO:0009736 | |
Bpe13g01498 | 541 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 198 | 251 | IPR006447 | GO:0003677 | |
Bpe13g01498 | 541 | MobiDBLite | consensus disorder prediction | 332 | 351 | - | - | |
Bpe13g01498 | 541 | Pfam | Response regulator receiver domain | 19 | 128 | IPR001789 | GO:0000160 | |
Bpe13g01498 | 541 | ProSiteProfiles | Response regulatory domain profile. | 18 | 133 | IPR001789 | GO:0000160 | |
Bpe13g01498 | 541 | SUPERFAMILY | CheY-like | 16 | 141 | IPR011006 | - | |
Bpe13g01498 | 541 | SMART | REC_2 | 17 | 129 | IPR001789 | GO:0000160 | |
Bpe13g01498 | 541 | Gene3D | - | 195 | 257 | - | - | |
Bpe13g01498 | 541 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR ARR11 | 2 | 507 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe13g00682 | Bpe-Chr13:13506862 | Bpe13g01498 | Bpe-Chr13:20363692 | 1.07E-93 | dispersed | |
Bpe13g01134 | Bpe-Chr13:16879739 | Bpe13g01498 | Bpe-Chr13:20363692 | 4.70E-77 | dispersed | |
Bpe13g01498 | Bpe-Chr13:20363692 | Bpe02g01970 | Bpe-Chr2:21547512 | 4.31E-94 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
22398 | PF00072 | Response_reg | 5.30E-25 | CL0304 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe13g01498 | - | K14491 | csv:101204370 | 554.288 |