Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g00030 ATGGATTCGGAAGAGGATGAGTTCGATATGCATGACGCTCACGATGTTGATGACGAAGATTTCTATAGCGGCGGCGAAGACGATGCAGCTGCAGTGGACAGTGATGATGCTGATTTGGCCGATTACGAGTTCATTGATAACGACTCAGATGATTCTGACGGTGTTATCTCGCATCGGCACCAGCCAAACTTTACCATCTTGAGTGAGGCAGATATACACCAGCGCCAAGAGGATGATATCATGAGAGTATCTACCGTTCTTTCAATTCCAAAGGTTTCAGCTAGCATCCTGCTCCGCTATTATAATTGGAGCGTCAGTAAAGTGCACGATGAATGGTTTGCTGACGAAGAAAAAGTTTGTAGGGCTGTAGGCTTGCTGGCCAAACCAGTTGTTGATTTTTCCAATGTGAAAGTACTAGCTTGTGGCATATGTTTTGAAACCTATCCTTCTGATAGGATTTGTGCTGCTTCTTGTGGTCATCCATTTTGCAAAGCGTGCTGGACAGGTTATATTAGTACATCTATTAATGGTGGTCCTGGATGTCTAACGCTGCGATGTCCTGAACCATCTTGCGTTGCTGCTGTTGGCCAAGATACAATTAATATGTTGGCATCAGAGGAAGATAAACAGAAGTATTCTCGTTACTTTGTAAGATCTTATATTGAAGACAATCGGAAGACAAAGTGGTGTCCTGCTCCAGGATGTGATTATGCTGTGGATTTTATTGTTGGAAGTGGAAGCTATGATGTGACATGCCGCTGCTCATATAGCTTTTGCTGGAATGTTCGAATTATGTTTTTGACTAATTGCATCTGGGAACTTCACCTTGTTCAGTGTACAGAAGAAGCTCATCGTCCTGTTGATTGTGGCACAGTGGCCAAATGGATTTTGAAGAACAGTGCTGAATCAGAAAACATGAATTGTCATACTTTTAGTCTGTGTTTTACGTCTTTTCATGTTTTGGGACTTGAATTCTTAGCTTATTATTTGTATATTTTCATGACTCTCCGGCATGACTTTATTTGTGTGTGTTTTGTGTCCTTCCATGACTTTGAGACGTTGCTTGTTAGTTTTCATTGTCTTGGCATGTTATGGTGCATGAATGATCTTTTGTCTCTGTGCATTAAAGGTTCTCTTGGTACCTATTTAAGTGTTTTTAGTATAAAAAAGAAGATTTTGGCTAATTCAAAACCTTGTCCAAAATGCAAAAGACCTATTGAAAAAAATCAAGGGTGTATGCATATTACTTGTACACCCCCTTGTAAATTTGAGTTTTGCTGGCTTTGCCTTGGTGCATGGTCTGATCACGGTGAGCGAACTGGTGGATTTTATGCATGTAACCGTTACGAAACGGCGAAGCAGGAGGGTGTGTATGATGAAGCTGAAAAGAGAAGGGAAATGGCGAAGAACTCTCTTGAGAGGTACACTCATTACTATGAAAGATGGGCTACAAATCAATCGTCCAGGCAAAAAGCACTTACAGATCTCCATCAAATGCAAAATGTGCATCTTGAGAAGCTAAGCGACGTTCAGTGCCAGCCTGAATCACAGCTCAAGTTCATCACAGAAGCCTGGCTTCAGATAGTTGAGTGTAGAAGAGTACTCAAATGGACTTATGCTTATGGTTTTTATCTACCCGAGTACGAACATGCAAAGAGACGTTTCTTTGAGTACTTGCAAGGTGAGGCTGAGTCGGGGCTTGAACGACTTCATCAGTGTGTGGAAAAGGAACTTCAAGTTTATCTCAATGCAGAAGGCCCGTTGAAAGATTTCAATGAGTTTCGCACAAAACTTGCTGGACTAACTAGCGTGACTAGGAACTACTTTGAGAATCTGGTCCGCGCACTTGAAAATGGTCTATCAGACGTGAACTCACACGGTGCTTGCAGCCGTGCAGCTAGCTTGAAGATCATGGGAGGCGGTAGTAGCAGGGGCAGAGGCGGGAAGGGCAAAGGGTCAACATCTAGATCGAGCAGTTCAAGTCGAACAGTCGACAATTCTGATCATTAA 2010 42.54 MDSEEDEFDMHDAHDVDDEDFYSGGEDDAAAVDSDDADLADYEFIDNDSDDSDGVISHRHQPNFTILSEADIHQRQEDDIMRVSTVLSIPKVSASILLRYYNWSVSKVHDEWFADEEKVCRAVGLLAKPVVDFSNVKVLACGICFETYPSDRICAASCGHPFCKACWTGYISTSINGGPGCLTLRCPEPSCVAAVGQDTINMLASEEDKQKYSRYFVRSYIEDNRKTKWCPAPGCDYAVDFIVGSGSYDVTCRCSYSFCWNVRIMFLTNCIWELHLVQCTEEAHRPVDCGTVAKWILKNSAESENMNCHTFSLCFTSFHVLGLEFLAYYLYIFMTLRHDFICVCFVSFHDFETLLVSFHCLGMLWCMNDLLSLCIKGSLGTYLSVFSIKKKILANSKPCPKCKRPIEKNQGCMHITCTPPCKFEFCWLCLGAWSDHGERTGGFYACNRYETAKQEGVYDEAEKRREMAKNSLERYTHYYERWATNQSSRQKALTDLHQMQNVHLEKLSDVQCQPESQLKFITEAWLQIVECRRVLKWTYAYGFYLPEYEHAKRRFFEYLQGEAESGLERLHQCVEKELQVYLNAEGPLKDFNEFRTKLAGLTSVTRNYFENLVRALENGLSDVNSHGACSRAASLKIMGGGSSRGRGGKGKGSTSRSSSSSRTVDNSDH 669
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 495938 504481 + Bpe006690.1 Bpe14g00030 114339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g00030 669 CDD RING-HC_RBR_TRIAD1_like 141 191 - -
Bpe14g00030 669 ProSiteProfiles Zinc finger RING-type profile. 141 187 IPR001841 -
Bpe14g00030 669 MobiDBLite consensus disorder prediction 1 35 - -
Bpe14g00030 669 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 27 307 IPR031127 GO:0004842|GO:0016567
Bpe14g00030 669 SUPERFAMILY RING/U-box 392 439 - -
Bpe14g00030 669 SMART ibrneu5 381 446 IPR002867 -
Bpe14g00030 669 SMART ibrneu5 210 289 IPR002867 -
Bpe14g00030 669 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 391 633 IPR031127 GO:0004842|GO:0016567
Bpe14g00030 669 Gene3D - 285 623 - -
Bpe14g00030 669 Coils Coil 458 478 - -
Bpe14g00030 669 ProSiteProfiles TRIAD supradomain profile. 137 450 IPR044066 -
Bpe14g00030 669 MobiDBLite consensus disorder prediction 648 669 - -
Bpe14g00030 669 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 136 222 IPR013083 -
Bpe14g00030 669 Pfam Ariadne domain 459 620 IPR045840 -
Bpe14g00030 669 SUPERFAMILY RING/U-box 137 222 - -
Bpe14g00030 669 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 391 633 - -
Bpe14g00030 669 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 27 307 - -
Bpe14g00030 669 MobiDBLite consensus disorder prediction 638 669 - -
Bpe14g00030 669 Pfam IBR domain, a half RING-finger domain 394 437 IPR002867 -
Bpe14g00030 669 Pfam IBR domain, a half RING-finger domain 210 261 IPR002867 -
Bpe14g00030 669 SUPERFAMILY RING/U-box 211 296 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00982 Bpe-Chr5:22642353 Bpe14g00030 Bpe-Chr14:495938 5.86E-91 dispersed
Bpe07g00414 Bpe-Chr7:4176421 Bpe14g00030 Bpe-Chr14:495938 3.39E-20 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g00030 K11968 - mnt:21387087 503.056