Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe14g00045 | ATGGTTGCAGAGAAGAGTGAAAAATTCATGGCATCTCCGTCCAACTCCCCCTGTGCAGCCTGTAAATTTCTCCGCCGGAAATGTCAGCTTGAGTGCGTTTTCGCTCCCTACTTCCCGCCCGACCAACCTCAAAAATTCGCAAACGTACACAAAGTGTTCGGAGCAAGCAATGTCACGAAGCTTCTCAACGAGCTCCACCCCCATCAGCGAGAAGATGCCGTCAATTCCCTCGCATACGAGGCCGACATGCGCCTCCGAGATCCGGTCTATGGGTGTGTAGGGGTCATCTCGCTCCTCCAGCACCAACTCCGGCAGCTCCAAATCGACCTCAGCTGTGCAAAATCCGAGCTCTCGAAATACCAAAATCTCGGCCTGACCGGGCATGGCCTCATTGCCGCCGCTGCAGCAGCTGCCACTTCCAGTCACAACCACCACCACCTGCAGAACCTCGGAATCAACCTGATTGGCTCCGCCAGAGATTATCACCACCACCACCAACTGTTCCCTCGCGATCAGGCCCAGCCGATCGGCAGGGGCTTTGACATTGCCGGAAACAGCGTTTACGATGGCAGTCTCCTTGCGATGAATGTTTCTAGTTTGGGCCAACTGAGTCAGTTTCAGCAACCCAAGGGTGGAGGTGATGATCACCGCCGAACGATCGATCCCTCTTAG | 672 | 55.21 | MVAEKSEKFMASPSNSPCAACKFLRRKCQLECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQNLGLTGHGLIAAAAAAATSSHNHHHLQNLGINLIGSARDYHHHHQLFPRDQAQPIGRGFDIAGNSVYDGSLLAMNVSSLGQLSQFQQPKGGGDDHRRTIDPS | 223 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 687932 | 688603 | + | Bpe006706.1 | Bpe14g00045 | 114354 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe14g00045 | 223 | Pfam | Lateral organ boundaries (LOB) domain | 17 | 114 | IPR004883 | - | |
Bpe14g00045 | 223 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 11 | 191 | - | - | |
Bpe14g00045 | 223 | Coils | Coil | 96 | 123 | - | - | |
Bpe14g00045 | 223 | ProSiteProfiles | LOB domain profile. | 16 | 117 | IPR004883 | - | |
Bpe14g00045 | 223 | MobiDBLite | consensus disorder prediction | 204 | 223 | - | - | |
Bpe14g00045 | 223 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 6-LIKE | 11 | 191 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe13g00079 | Bpe-Chr13:4520189 | Bpe14g00045 | Bpe-Chr14:687932 | 1.07E-51 | dispersed | |
Bpe13g00250 | Bpe-Chr13:10454390 | Bpe14g00045 | Bpe-Chr14:687932 | 1.54E-49 | dispersed | |
Bpe14g00045 | Bpe-Chr14:687932 | Bpe15g00346 | Bpe-Chr15:15008398 | 7.36E-55 | dispersed | |
Bpe14g00045 | Bpe-Chr14:687932 | Bpe02g01341 | Bpe-Chr2:17034422 | 7.31E-133 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
22401 | PF03195 | LOB | 3.30E-42 | No_clan | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe14g00045 | - | - | vvi:100262280 | 346.28 |