Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g00045 ATGGTTGCAGAGAAGAGTGAAAAATTCATGGCATCTCCGTCCAACTCCCCCTGTGCAGCCTGTAAATTTCTCCGCCGGAAATGTCAGCTTGAGTGCGTTTTCGCTCCCTACTTCCCGCCCGACCAACCTCAAAAATTCGCAAACGTACACAAAGTGTTCGGAGCAAGCAATGTCACGAAGCTTCTCAACGAGCTCCACCCCCATCAGCGAGAAGATGCCGTCAATTCCCTCGCATACGAGGCCGACATGCGCCTCCGAGATCCGGTCTATGGGTGTGTAGGGGTCATCTCGCTCCTCCAGCACCAACTCCGGCAGCTCCAAATCGACCTCAGCTGTGCAAAATCCGAGCTCTCGAAATACCAAAATCTCGGCCTGACCGGGCATGGCCTCATTGCCGCCGCTGCAGCAGCTGCCACTTCCAGTCACAACCACCACCACCTGCAGAACCTCGGAATCAACCTGATTGGCTCCGCCAGAGATTATCACCACCACCACCAACTGTTCCCTCGCGATCAGGCCCAGCCGATCGGCAGGGGCTTTGACATTGCCGGAAACAGCGTTTACGATGGCAGTCTCCTTGCGATGAATGTTTCTAGTTTGGGCCAACTGAGTCAGTTTCAGCAACCCAAGGGTGGAGGTGATGATCACCGCCGAACGATCGATCCCTCTTAG 672 55.21 MVAEKSEKFMASPSNSPCAACKFLRRKCQLECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQNLGLTGHGLIAAAAAAATSSHNHHHLQNLGINLIGSARDYHHHHQLFPRDQAQPIGRGFDIAGNSVYDGSLLAMNVSSLGQLSQFQQPKGGGDDHRRTIDPS 223
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 687932 688603 + Bpe006706.1 Bpe14g00045 114354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g00045 223 Pfam Lateral organ boundaries (LOB) domain 17 114 IPR004883 -
Bpe14g00045 223 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 11 191 - -
Bpe14g00045 223 Coils Coil 96 123 - -
Bpe14g00045 223 ProSiteProfiles LOB domain profile. 16 117 IPR004883 -
Bpe14g00045 223 MobiDBLite consensus disorder prediction 204 223 - -
Bpe14g00045 223 PANTHER LOB DOMAIN-CONTAINING PROTEIN 6-LIKE 11 191 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe13g00079 Bpe-Chr13:4520189 Bpe14g00045 Bpe-Chr14:687932 1.07E-51 dispersed
Bpe13g00250 Bpe-Chr13:10454390 Bpe14g00045 Bpe-Chr14:687932 1.54E-49 dispersed
Bpe14g00045 Bpe-Chr14:687932 Bpe15g00346 Bpe-Chr15:15008398 7.36E-55 dispersed
Bpe14g00045 Bpe-Chr14:687932 Bpe02g01341 Bpe-Chr2:17034422 7.31E-133 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22401 PF03195 LOB 3.30E-42 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g00045 - - vvi:100262280 346.28