Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g00055 ATGAACTCGTCCGGTGAATTTGGTCACCACCTTAAACGGAAGCGCGAAGAGATTGATTTGTCGAATGGCGCTACCGCCTATTCTGGAGAGGTTGATTTGTCTCTCTTAGAAGCTGTGGAAAATTCCCAGAAAAACGCTGTGGAAGTTCTCGACATCCGGACTCTGAAGAAGATGGCTTTATCCTTAGAACGCCACCTCAACGACAACATAGCCGCTCGCCTTAAGTACCCCGAACAGCCTAACCGGTTCGTCGATTCGGAGATCGAGCTTCACGAAGATCTGCAGAAGCTCAAAATACTAGCCGGTGGTCCCGAACTTTACCCTGAACTTGTCAATCTCAATGTAGTCCCCTCCATCGTCCAACTTCTTAATCATGACAACACGGATATCGCCATCGACGTTGTCCAATTGCTCCAGGAACTTACTGATGAAGATGTTCTTGAGGATAATGACGAGCCTGCTCGAGTCTTAGTTGACTCACTCGTCGAGAATAGCTCACTCGAACTGTTGGTTCAAAATCTGCACCGGCTATCTGATACTGATCCAGACGAGATGGCGGCTGTATATAATACCCTAGCTACTATTGAGAATTTGATAGAGGTGAAGCCTGCCGTTGCTGAAATGGTCTGCGAGCGTACGAAACTCCTGAAGTGGTTGCTTGGTAAAATTAAGGTGAGGGAGTTTGATAGTAACAAGCAGTATGCGTCGGAGATATTGGCTATATTGTTGCAGAATAGTCCGGCGAACCAGAGGAGACTTGGGCAGATGAATGGCGTTGACGTAGTTCTTCAGGCAGTGGCAATGTACAAGTCCAAGGACCCCAAGAGCACCGATGAGGCTGAGATGGTGGAAAATTTATTTGATTGTTTGTGTTGTTTGTTAATGCCATTGGAGAACAAGGAGCGGTTTGTGAAGGCCGAGGGAGTGGAGTTGATGATTATCATTATGAAGCAGAAGAAATCTGCTTATGGATCGGCCATCAGGGCACTTGATTTTGCCATGACCAAGTACCCACCTGCTTGCGAAAGATTTGTGGATGTTTTGGGATTGAAGACAGCATTTGCTGCTTTCATGGGTAAGATTCCTGTAAATAAGAAGAACAAGAAGGAACGTTATCAAGAGGAGTTAGAAGAGCGCATTATATCGCTAATTGCATCATTGTTTGGTGGGATATTAAGGGGCTCCAGAAGGGACAGGTTATTAAGCAAGTTTATCGAAAATGAGTGTGAAAAGATAGATCGGCTTATGGAACTTTATATAAGATATTCTGACAAAGTTAAAACAGAGACTGATCGCCTTGACGAGCTTGAACTTGAGGACTTGGAGATGGATGATGATGAAAAATACAACAGAAGGCTAGAATCTGGTCTTTACACTCTTCAGTTGATTGCCACTATTTTGGGCCATCTCTGCTGTTGTGAACACCCTGAAATGAAAGCAAGAATTGAATTGCTACTGAAGCAGCAAAAACTTACTGGAAAGGACATCTGTGAAATTCTTCAGGAATACCATGATAATATTGGTGATGTGGATGGACGAGAAGAGAAGGAAAGAGCACAGTCTAAGATTCAGAAATTCATCTCAGCATTTTGA 1593 44.07 MNSSGEFGHHLKRKREEIDLSNGATAYSGEVDLSLLEAVENSQKNAVEVLDIRTLKKMALSLERHLNDNIAARLKYPEQPNRFVDSEIELHEDLQKLKILAGGPELYPELVNLNVVPSIVQLLNHDNTDIAIDVVQLLQELTDEDVLEDNDEPARVLVDSLVENSSLELLVQNLHRLSDTDPDEMAAVYNTLATIENLIEVKPAVAEMVCERTKLLKWLLGKIKVREFDSNKQYASEILAILLQNSPANQRRLGQMNGVDVVLQAVAMYKSKDPKSTDEAEMVENLFDCLCCLLMPLENKERFVKAEGVELMIIIMKQKKSAYGSAIRALDFAMTKYPPACERFVDVLGLKTAFAAFMGKIPVNKKNKKERYQEELEERIISLIASLFGGILRGSRRDRLLSKFIENECEKIDRLMELYIRYSDKVKTETDRLDELELEDLEMDDDEKYNRRLESGLYTLQLIATILGHLCCCEHPEMKARIELLLKQQKLTGKDICEILQEYHDNIGDVDGREEKERAQSKIQKFISAF 530
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 886201 890811 - Bpe024953 Bpe14g00055 114364

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g00055 530 Coils Coil 419 439 - -
Bpe14g00055 530 SUPERFAMILY ARM repeat 94 482 IPR016024 -
Bpe14g00055 530 PANTHER BETA-CATENIN-LIKE PROTEIN 1 NUCLEAR ASSOCIATED PROTEIN 28 530 IPR039678 -
Bpe14g00055 530 Pfam Catenin-beta-like, Arm-motif containing nuclear 35 501 IPR013180 -
Bpe14g00055 530 PANTHER BETA-CATENIN-LIKE PROTEIN 1 28 530 - -
Bpe14g00055 530 Gene3D - 48 530 IPR011989 -
Bpe14g00055 530 SMART DUF1716_2 28 135 IPR013180 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g00055 K12864 CTNNBL1; beta-catenin-like protein 1 - qsu:112006722 822.002
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g739 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bpe14g00055 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010589 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 2 31
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe14g00055 Bpe_Chr14 FPKM 1.478605 1.524575 1.717485 1.828414 1.739521 0.643213 2.278416 2.776302 3.006548 3.719098