Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g00065 ATGGGCGTCGGAACGGTGGGGTCGTCGGAGGCCATTATGCTTGCTGGCTTGGCTTTCAAGAGAAAATGGCAGAACAAAATGAAAGCAGCGGGGAAAACCTGTGATAAGCCCAATATCGTCACCGGAGCCAATGTCCAGGTGTGCTGGGAGAAATTTGCAAGATACTTTGAAGTGGAGCTGAAGGAAGTGAAGCTGAGGGAAGGGTACTATGTGATGGACCCAAAGAAAGCTGTGGAGATGGTTGACGAGAACACCATCTGTGTGGCTGCAATTCTCGGTTCTACTCTCAATGGAGAATTTGAAGACGTTAAACTCCTGAATGATCTCTTGACAAAGAAAAACGAGCAAACTGGATGGGACACTCCTATTCATGTTGATGCAGCAAGCGGTGGGTTCATTGCTCCATTTCTTTACCCTGAGCTGGAGTGGGACTTCAGGCTGCCATTAGTGAAAAGCATCAACGTCAGTGGGCATAAATATGGACTTGTTTATGCCGGTATCGGGTGGGTTATTTGGAGGAGCAAGGAGGATTTGCCTGACGAACTCATTTTCCACATCAACTATCTTGGAGCTGATCAACCTACGTTCACCCTCAACTTCTCAAAAGGCTCTAGCCAAGTGATTGCTCAGTATTACCAGCTTATTCGCTTGGGATATGAAGGATATAAAAACGTCATGGAAAATTGCCGAGAAAATGCAATTATACTAAGAGAAGGATTGGAAAAGACTGGCCGTTTCACCATCGTCTCAAAGGACGAAGGAGTCCCCTTAGTCGCCTTCTCTCTCAAAGACAACAGCTGCCACAACGAGTTTGAGATTTCTGACATGGTGAGGCGCTTCGGCTGGATAGTGCCAGCCTACACCATGCCGGCCGATGCACAACACATTACTGTCCTTCGAGTTGTAATTCGCGAAGATTTTTCTTGCACACTTGCCGAACGCCTAGTTAGTGATATCGAAAAAGTTCTACACGAACTCGACACTCTTCCTGCCCGAGTGGTGACAACTAAAGTGGAAGCCACGGAAGCAGACGTCACAGAGGAAGTAGTCCCGGAGGATGGGACTGTGACGGTGATTATCAAGAAGAGCGACAGGGAGGTGGAGAAGGAGGTGACTACAGTTTGGAAGAAGTTTGTGGCCAATAGGAAGAAGAAGAATGGTGTTTGCTAG 1170 47.52 MGVGTVGSSEAIMLAGLAFKRKWQNKMKAAGKTCDKPNIVTGANVQVCWEKFARYFEVELKEVKLREGYYVMDPKKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLTKKNEQTGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRSKEDLPDELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGYEGYKNVMENCRENAIILREGLEKTGRFTIVSKDEGVPLVAFSLKDNSCHNEFEISDMVRRFGWIVPAYTMPADAQHITVLRVVIREDFSCTLAERLVSDIEKVLHELDTLPARVVTTKVEATEADVTEEVVPEDGTVTVIIKKSDREVEKEVTTVWKKFVANRKKKNGVC 389
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1026114 1028502 + Bpe006718.1 Bpe14g00065 114374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g00065 389 Pfam Pyridoxal-dependent decarboxylase conserved domain 2 263 IPR002129 GO:0016830|GO:0019752|GO:0030170
Bpe14g00065 389 Gene3D - 1 242 IPR015421 GO:0003824
Bpe14g00065 389 PANTHER GLUTAMATE DECARBOXYLASE 1 389 IPR010107 GO:0004351|GO:0006536|GO:0030170
Bpe14g00065 389 SUPERFAMILY PLP-dependent transferases 2 326 IPR015424 -
Bpe14g00065 389 Gene3D - 243 330 - -
Bpe14g00065 389 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 1 326 IPR010107 GO:0004351|GO:0006536|GO:0030170
Bpe14g00065 389 PANTHER GLUTAMATE DECARBOXYLASE 1 389 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe09g00716 Bpe-Chr9:15744910 Bpe14g00065 Bpe-Chr14:1026114 0 dispersed
Bpe05g00950 Bpe-Chr5:22429805 Bpe14g00065 Bpe-Chr14:1026114 4.87E-12 transposed
Bpe14g00447 Bpe-Chr14:4084423 Bpe14g00065 Bpe-Chr14:1026114 1.12E-07 transposed
Bpe14g00065 Bpe-Chr14:1026114 Bpe02g01352 Bpe-Chr2:17143152 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g00065 K01580 - pvy:116131519 665.611