Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g00067 ATGAAGAAAAGAGTAGTCTACTCTGAGTACTGGCTTTTGTTGCTTTTGCTTACTGGGTTTTCTTCAAGCTTTCTCCTTGTGAGGTCTCAGTCGAGTTCGAGCAACGATGCTTCTGTAATGATGGATTTGAAGAAGAGCCTCAATCCTCCTGCTGCTCTCGGGTGGTCGGACCCCGACCCTTGTCTCTGGAACCACGTTGTTTGCTCCGAAGATAAACGGGTCACTCGGATCCAAATCGGCCGGCAAAACCTTCGAGGTACGCTTCCTTCAACTCTCCAGAATCTCACTGTACTTGAGCGTTTGGAGCTCCAGTGGAATAACATTTCCGGTCCTTTACCTAGTTTGAGCGGATTAAGTTCATTACAAGTTCTAATGCTTAGTAACAACCAGTTTAGTTCAATACCCAGTGATTTTTTCTCCGGAATGTCGTCGCTTCAATCCGTCGAGATTGATTATAATCCATTTTCTAGTTGGGAAATCCCGGAAAGTATCCAAAACGCTTCTGCTCTGCAGAATTTATCAGCCAACTCAGTGAATATTTCCGGTAAGATACCGGTTTTTCTTGGAACGGACGTCTTTCCGGCCTTGATTAATCTGCACTTGGCCTTCAATAATCTCCAAGGCAGCTTGCCGGACAGTTTCGCCGGCTCCCAAATTCAATCTCTGTGGGTTAACGGGCAACAAAGCAGCAGTAAACTTAGTGGGGACATTGACGTCATTCAGAACATGACTGCTTTGAGAGAGGTTTGGCTACATTCGAATGCTTTTTCAGGTTCATTACCGGATTTTTCAGGTTTGAAAGATTTGCAGGCCTTGAGTTTGAGAGATAATAAGTTTACCGGTCCTGTTCCAGCTTCATTGTCGAATCTTGAATCTTTAATATATGTTAACTTGTCGAATAATCTGTTTCAAGGGCCGACGCCACTGTTTAGAAGCGGGGTAAGCTTGGATATGACTAAGGATTCGAATAGTTTCTGTTTGCCAAATCCTGGCGATTGCGATGGAAGAATTAATACATTACTTTCAATCGTGAAACTGATGAATTATCCAGAGAAGTTTGCAGAAAGTTGGAAGCAGAATGATCCTTGTGCAGATTGGGTTGGAATCACTTGTCTAAAAGGAAATATAACAGTAATTAATTTTCGGAATATGGGTCTTACCGGAGAGATTTCGCCTGTGTTTTCTTCGCTTAAATCGCTCCAGAGATTGATCCTTGCTGATAACAATCTTACAGGCTCAATCCCCAATGAACTTACTACTCTCCCTGAGCTTTCTGAGTTAGATGTATCAGACAATAAGCTTTCTGGGAAGATACCATCCTTCAAAAGTAATATAATGGTGAACACAAAAGGGAATTCAGGTATAGGTAAAAATATAAGTGGATCGTCTCCGGGTTCAGGTGAAACTTCATCGATTCCGTCAGGTTCAGACTCTGAAAATGGCGGGAAGAAATCAAAATCTTTGATTGGAGTTGTTGTATTTTCAGTGATTGGAGGGATCTTCGTCATTCTCCTGATTGGTTTGTTGGTTTTCTGCGTGTACAAAACAAAACAAAAACGATTCAGCAGGGTGCAGAGCCCGAACGCTATGGTGATTCATCCCCGCCATTCGGGGTCCGACACTGAGAGCGTCAAAATCACAGTTGCCGGATCGAGCGTCAGCGTTGGTGCCATCAGCGAAGCCCATACTTTTCCGGCAAGCAATTCCGGCGACGTTCAAATGGTCGAAGCAGGAAACATGGTGATCTCAATTCAAGTTCTGAGAAACGTGACAAACAATTTCAGCGAGGAAAACATTCTGGGAAGAGGCGGGTTCGGGACGGTTTACAAAGGCGAATTACACGACGGCACAAAAATTGCCGTGAAAAGAATGGAATCGGGGGTGATAGCCGGCAAGGGATTGGCGGAGTTCAAGTCGGAAATTGGCGTTTTGACTAAGGTGAGGCATCGAAATCTGGTAGCTCTTCTCGGATACTGCTTGGACGGAAATGAGAAGCTTCTAGTTTATGAATACATGCCTCAAGGAACTCTTAGTAGGCATATATTCAATTGCCATGAAGAAGGGTTGAACCCTTTGGATTGGACAAAGAGATTAACTCTTGCATTGGATGTTGCGAGGGGAGTTGAGTATCTCCATGGTTTGGCTCACCAAAGCTTCATACATAGGGACTTAAAACCTTCAAATATTCTACTTGGAGATGACATGAGGGCTAAGGTTTCGGATTTCGGCCTCGTCCGATTGGCTCCAGAGGGAAAAGGGTCTATCGAAACAAGTATTGCTGGAACGTTTGGGTACTTGGCACCAGAGTATGCAGTGACGGGTCGAGTTACAACGAAAGTCGATGTGTTTAGCTTTGGAGTGATTCTGATGGAGCTGATCACCGGAAGACGAGCACTGGACGAAAGCCAACCGGAAGAAAGCATGCACTTAGTGACGTGGTTTCGAAGAATGCACATCAACAAAGATTCTTTCCGTAAAGCCATCGACTCGATGATCGACCTCTCAGAAGAGACCTTTGCCAGTATCCTCACCGTTGCAGAATTGGCTGGCCATTGTTGCGCGAGAGAGCCGTATCAGAGGCCGGACATGGGGCATGCAGTGAATGTATTATCCTCGCTGGTAGACCTTTGGAAGCCGAGCAATCAAAGCTCCGAAGACATCTACGGGATTGATCTTGATATGTCCTTACCTCAGGCTCTAAAGAAATGGCAGGCGTATGAAGGGAGGACCCACATGGAGTCGTCTTCCTCCTCTCTGCTTCCAAGCTTAGACAACACCCAGACCAGCATTCCGACACGGCCACACGGGTTCGCTGAGTCTTTCACCTCTGCTGACGGGCGATGA 2844 45.5 MKKRVVYSEYWLLLLLLTGFSSSFLLVRSQSSSSNDASVMMDLKKSLNPPAALGWSDPDPCLWNHVVCSEDKRVTRIQIGRQNLRGTLPSTLQNLTVLERLELQWNNISGPLPSLSGLSSLQVLMLSNNQFSSIPSDFFSGMSSLQSVEIDYNPFSSWEIPESIQNASALQNLSANSVNISGKIPVFLGTDVFPALINLHLAFNNLQGSLPDSFAGSQIQSLWVNGQQSSSKLSGDIDVIQNMTALREVWLHSNAFSGSLPDFSGLKDLQALSLRDNKFTGPVPASLSNLESLIYVNLSNNLFQGPTPLFRSGVSLDMTKDSNSFCLPNPGDCDGRINTLLSIVKLMNYPEKFAESWKQNDPCADWVGITCLKGNITVINFRNMGLTGEISPVFSSLKSLQRLILADNNLTGSIPNELTTLPELSELDVSDNKLSGKIPSFKSNIMVNTKGNSGIGKNISGSSPGSGETSSIPSGSDSENGGKKSKSLIGVVVFSVIGGIFVILLIGLLVFCVYKTKQKRFSRVQSPNAMVIHPRHSGSDTESVKITVAGSSVSVGAISEAHTFPASNSGDVQMVEAGNMVISIQVLRNVTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMESGVIAGKGLAEFKSEIGVLTKVRHRNLVALLGYCLDGNEKLLVYEYMPQGTLSRHIFNCHEEGLNPLDWTKRLTLALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVSDFGLVRLAPEGKGSIETSIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRRALDESQPEESMHLVTWFRRMHINKDSFRKAIDSMIDLSEETFASILTVAELAGHCCAREPYQRPDMGHAVNVLSSLVDLWKPSNQSSEDIYGIDLDMSLPQALKKWQAYEGRTHMESSSSSLLPSLDNTQTSIPTRPHGFAESFTSADGR 947
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1077870 1080909 + Bpe006722.1 Bpe14g00067 114376

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g00067 947 SUPERFAMILY Protein kinase-like (PK-like) 570 879 IPR011009 -
Bpe14g00067 947 CDD STKc_IRAK 600 873 - -
Bpe14g00067 947 Pfam Leucine rich repeat 115 154 IPR001611 GO:0005515
Bpe14g00067 947 Pfam Leucine rich repeat 393 434 IPR001611 GO:0005515
Bpe14g00067 947 Gene3D Transferase(Phosphotransferase) domain 1 672 891 - -
Bpe14g00067 947 SUPERFAMILY L domain-like 61 443 - -
Bpe14g00067 947 ProSiteProfiles Leucine-rich repeat profile. 120 141 IPR001611 GO:0005515
Bpe14g00067 947 Gene3D Phosphorylase Kinase; domain 1 556 671 - -
Bpe14g00067 947 SMART LRR_typ_2 118 141 IPR003591 -
Bpe14g00067 947 SMART LRR_typ_2 193 216 IPR003591 -
Bpe14g00067 947 SMART LRR_typ_2 243 265 IPR003591 -
Bpe14g00067 947 SMART LRR_typ_2 397 421 IPR003591 -
Bpe14g00067 947 MobiDBLite consensus disorder prediction 914 947 - -
Bpe14g00067 947 Pfam Protein kinase domain 595 868 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe14g00067 947 Gene3D Ribonuclease Inhibitor 33 333 IPR032675 -
Bpe14g00067 947 ProSitePatterns Serine/Threonine protein kinases active-site signature. 719 731 IPR008271 GO:0004672|GO:0006468
Bpe14g00067 947 ProSitePatterns Protein kinases ATP-binding region signature. 600 632 IPR017441 GO:0005524
Bpe14g00067 947 Pfam Leucine rich repeat N-terminal domain 34 69 IPR013210 -
Bpe14g00067 947 Pfam Leucine rich repeat N-terminal domain 338 371 IPR013210 -
Bpe14g00067 947 MobiDBLite consensus disorder prediction 914 936 - -
Bpe14g00067 947 Gene3D Ribonuclease Inhibitor 335 459 IPR032675 -
Bpe14g00067 947 SMART serkin_6 594 874 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe14g00067 947 ProSiteProfiles Protein kinase domain profile. 594 874 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe14g00067 947 MobiDBLite consensus disorder prediction 452 482 - -
Bpe14g00067 947 PANTHER OSJNBA0070M12.3 PROTEIN 14 947 - -
Bpe14g00067 947 PANTHER RECEPTOR PROTEIN KINASE TMK1 14 947 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g00067 - - K00924 jre:108988162 1429.08
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01964 Bpe-Chr2:21512273 Bpe14g00067 Bpe-Chr14:1077870 0 dispersed
Bpe03g01195 Bpe-Chr3:30850899 Bpe14g00067 Bpe-Chr14:1077870 0 dispersed
Bpe04g00623 Bpe-Chr4:3987175 Bpe14g00067 Bpe-Chr14:1077870 0 dispersed
Bpe04g01491 Bpe-Chr4:21485912 Bpe14g00067 Bpe-Chr14:1077870 0 dispersed
Bpe13g00759 Bpe-Chr13:14121622 Bpe14g00067 Bpe-Chr14:1077870 0 dispersed
Bpe14g00067 Bpe-Chr14:1077870 Bpe14g01022 Bpe-Chr14:7598346 0 dispersed
Bpe14g00067 Bpe-Chr14:1077870 Bpe13g00997 Bpe-Chr13:15717302 0 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g747 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bpe14g00067 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001831 2 2 1 2 3 1 4 1 1 2 2 1 4 2 1 4 1 1 4 1 2 2 2 2 2 2 2 3 2 1 60
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63700 PF00069 Pkinase 1.80E-45 CL0016 Bpe PK
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe14g00067 Bpe_Chr14 FPKM 4.959857 5.314444 6.801515 6.262989 17.619635 16.591885 16.693806 0.77996 1.124256 0.411365