Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g00079 ATGGAGCACTTGTTGGGTCTTCTTAAAATTCATGTTTGCAGAGGGGTTAACCTTGCCGTGAGAGATGTAACGACCAGCGACCCTTATGTTGTTCTCAAAATGGGAGAACAGAAACTGAAAACTCGTGTAGTTAGGAAAAACATCAATCCAGAGTGGAACGAAGATTTAACTATGTCTGTTATGGATCCTTCTCTTCCGATTAAACTTTCTGTGTATGACAAAGATACATTTTCACTGGACGACAAAATGGGAGATGCCGAGTTCGAAATCAGGTCATTCATCGAAGCCGTGAGAATGCGATTGGATGACCTCCCTAGTGGAACTATTATAAGAAAGATTCAACCGAGCAGGCAAAATTGCTTGTCTGAAGAGAGTAGCATCGTTTGGGAAGGAGAGAAACTTGTCCAAAACTTGTTTCTCAGATTGAGAAACGTGGAATCTGGTGAAGTTCAATTGAAGTTGCAGTGGGTTGACATTCCTGGCTCGAGAGGCTTATGA 498 42.17 MEHLLGLLKIHVCRGVNLAVRDVTTSDPYVVLKMGEQKLKTRVVRKNINPEWNEDLTMSVMDPSLPIKLSVYDKDTFSLDDKMGDAEFEIRSFIEAVRMRLDDLPSGTIIRKIQPSRQNCLSEESSIVWEGEKLVQNLFLRLRNVESGEVQLKLQWVDIPGSRGL 165
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1274072 1275146 + Bpe006733.1 Bpe14g00079 114388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g00079 165 CDD C2_ArfGAP 5 148 - -
Bpe14g00079 165 PRINTS C2 domain signature 22 34 IPR000008 -
Bpe14g00079 165 PRINTS C2 domain signature 46 59 IPR000008 -
Bpe14g00079 165 PRINTS C2 domain signature 67 75 IPR000008 -
Bpe14g00079 165 Gene3D C2 domain 4 160 IPR035892 -
Bpe14g00079 165 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Bpe14g00079 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 163 IPR044562 -
Bpe14g00079 165 SMART C2_3c 7 102 IPR000008 -
Bpe14g00079 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 3-LIKE 1 163 - -
Bpe14g00079 165 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 113 IPR035892 -
Bpe14g00079 165 Pfam C2 domain 7 92 IPR000008 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g01867 Bpe-Chr11:15041547 Bpe14g00079 Bpe-Chr14:1274072 6.67E-53 dispersed
Bpe12g00697 Bpe-Chr12:12541503 Bpe14g00079 Bpe-Chr14:1274072 2.22E-78 dispersed
Bpe14g00079 Bpe-Chr14:1274072 Bpe02g01934 Bpe-Chr2:21294879 8.01E-13 dispersed
Bpe01g00481 Bpe-Chr1:2985026 Bpe14g00079 Bpe-Chr14:1274072 3.15E-37 transposed
Bpe02g01040 Bpe-Chr2:11173192 Bpe14g00079 Bpe-Chr14:1274072 3.00E-41 transposed
Bpe14g00079 Bpe-Chr14:1274072 Bpe15g00515 Bpe-Chr15:16350028 9.35E-80 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g00079 - - tcc:18601882 272.322