Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g00112 ATGCGGATGAGCTGCAATGGTTGCAGGGTGCTGCGCAAAGGATGTAGTGAAAATTGCAGCATTAGACCTTGTTTGCAGTGGATCAAGAGCCACGACTCTCAAGCGAACGCTACAGTCTTCCTCGCTAAGTTTTATGGCCGTGCCGGCCTTATGAATCTAATCAACGCCGGCCCTGATCATCTCCGACCTGCCATTTATAGGTCTTTGCTGTACGAAGCTTGCGGGAGGATTGTTAATCCAATTTATGGATCCGTCGGGTTGCTGTGGTCTGGGAGCTGGCAACTCTGCCAAGCTGCCGTCGAAGCGGTGCTGAAAGGAGATCCGATTACTACGATTACTTCAGAAGCTGCGGCGAACGGTCATGGACCGCCGCTTAAGCCCTACGATATCCGGCATGTGTCGAAGGATGTGAACTCCACCCCGTCAGATCGTCTCCGGCGAGGGAAGACTCGCTGCCGGTTGCATCGCTCCGTCGGAAAGCCGAAGCCGATTAAAGAGTCTCGGAAAGGTTCCGAAGTCGATCAAGTGGGCGATTTCTTCCCCGACCAGATGAACAGGTCGACGAGTCACGAGTCGTCCTTGAGTCACCAGTCCGACGCCGCCCCTAACGTGGAGAACGTGAGCAAGGAATCGGAACGCATCGTCTGCGTCGAGACAGCTGATGCTTCGGCCCCGGCGATGATACAATCAGAAACAGATTCCTTTCGTAAGCAGAAGTACGAAGCAATCGAGGAAGGAGACGTCACCCTGGAGCTTACCTTAGGGTTGAAACCTCCGATATCACACGCCATGCACGTGGTTCCTATGAAGAAGCGAAAAGTCGACCACTCCCCATCCGGCGCGTGTAAGACAGAGTTGGGCCTTGACTTGCAGGTTTAA 879 53.92 MRMSCNGCRVLRKGCSENCSIRPCLQWIKSHDSQANATVFLAKFYGRAGLMNLINAGPDHLRPAIYRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGDPITTITSEAAANGHGPPLKPYDIRHVSKDVNSTPSDRLRRGKTRCRLHRSVGKPKPIKESRKGSEVDQVGDFFPDQMNRSTSHESSLSHQSDAAPNVENVSKESERIVCVETADASAPAMIQSETDSFRKQKYEAIEEGDVTLELTLGLKPPISHAMHVVPMKKRKVDHSPSGACKTELGLDLQV 292
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1585846 1586814 + Bpe006765.1 Bpe14g00112 114421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g00112 292 PANTHER LOB DOMAIN-CONTAINING PROTEIN 40 1 289 - -
Bpe14g00112 292 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 289 - -
Bpe14g00112 292 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
Bpe14g00112 292 MobiDBLite consensus disorder prediction 159 209 - -
Bpe14g00112 292 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Bpe14g00112 292 PIRSF AS2 1 292 IPR017414 -
Bpe14g00112 292 MobiDBLite consensus disorder prediction 181 205 - -
Bpe14g00112 292 MobiDBLite consensus disorder prediction 128 146 - -
Bpe14g00112 292 MobiDBLite consensus disorder prediction 159 175 - -
Bpe14g00112 292 MobiDBLite consensus disorder prediction 115 146 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00043 Bpe-Chr5:766859 Bpe14g00112 Bpe-Chr14:1585846 1.20E-47 dispersed
Bpe13g00123 Bpe-Chr13:7812815 Bpe14g00112 Bpe-Chr14:1585846 5.95E-56 dispersed
Bpe14g00112 Bpe-Chr14:1585846 Bpe04g01798 Bpe-Chr4:23446699 9.86E-10 dispersed
Bpe14g00112 Bpe-Chr14:1585846 Bpe02g01403 Bpe-Chr2:17537492 1.41E-162 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22407 PF03195 LOB 1.40E-23 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g00112 - - mdm:103404890 369.777