Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g00128 ATGTTGAAAACTGAAGTCGATGCTACCAATGGCGACGAAGACGGCGACCGTGCAATTACCGGAGGCCGCAATAGTTGGGGACGAGTCTGCGATACTTGTCGGTCGGCGGCGTGTACAGTCTACTGCGGAGCTGATTCGGCGTTCCTATGCTCCGATTGCGACGCTCGAATCCACGCGGCTAACCGCGTTGCCTCTCGCCACGAGCGAGTCTTTGTATGTGAGGCGTGCGAGCGAGCCCCGGCTGCCTTTATCTGCAAGGCCGACGCAGCTTCTCTGTGCATCGCCTGCGACGCTGATGTTCACTCCGCAAATCCCCTGGCTAGCCGCCATCACCGTGTCCCAATTTTACCCATCTCTGGTACCGTCCACAGCCCTCGGTCGTCCAATGTCGCAGGCCTAGTCGGGGATACTGAAGATGGTGGATATCTTGGTCAAGAAGAAAACGAGCCAATTGACGAAGAAGACGAAGAAGAGGCAGCATCATGGCTGCTATTGAACCCCGTGAAGACCAGTTCGAGCCCTAGCAACATCAACAACAACAATCAAAAGACCACTGGATTTCTGTTCGCTGGCGGAGACGACGACTATTTGGATCTGGTCGAGTTCAATTCGTGCGGAGGAAATCAATTAGCTGAAGAACAGTACGACATTCCACAGCAACAATACAACAGTGCGGCGCAGAAGAATTACGGAGGAGATAGCGTTGTTCCAGTTCAGAATGAAATCAAGGAGAAGCTCCACCATCAGAATCAAAATTTTCAGCTGGGGCTTGAATATGATGCCTCTAAGTCAGGATTCGAGTTCAACGGCTTCATTAATCACAGCGTTTCGATCTCATCGATGGACGTAGGAGTCGTGCCAGAAACAACAGCGAGCGATATCTCAATCTCCCAGCCAAGGCCAAGGCCTCAAAAGGGGACAATCGACCTTTTCTCCAGTCCTCCCGTTCAAATCGCGACCCAACTTTGTCCGGTGGACCGGGAGGCTAGGGTTCTGAGATACAGAGAGAAGAAGAAGACCAGAAAATTCGAGAAGACAATCCGATATGCGTCGAGAAAGGCGTACGCAGAGACTCGACCCCGCATAAAGGGTCGGTTTGCGAAGAGAACACACTTGGAAGTGGAAGTTGATCAGAAATTATCGATGTCGTTCATGGTGGAATCTGGATACGGCGTCGTTCCGTCGTTCTAA 1191 51.89 MLKTEVDATNGDEDGDRAITGGRNSWGRVCDTCRSAACTVYCGADSAFLCSDCDARIHAANRVASRHERVFVCEACERAPAAFICKADAASLCIACDADVHSANPLASRHHRVPILPISGTVHSPRSSNVAGLVGDTEDGGYLGQEENEPIDEEDEEEAASWLLLNPVKTSSSPSNINNNNQKTTGFLFAGGDDDYLDLVEFNSCGGNQLAEEQYDIPQQQYNSAAQKNYGGDSVVPVQNEIKEKLHHQNQNFQLGLEYDASKSGFEFNGFINHSVSISSMDVGVVPETTASDISISQPRPRPQKGTIDLFSSPPVQIATQLCPVDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTHLEVEVDQKLSMSFMVESGYGVVPSF 396
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1750730 1751998 + Bpe006782.1 Bpe14g00128 114437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g00128 396 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 25 396 IPR045281 GO:0009909
Bpe14g00128 396 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 1 25 396 - -
Bpe14g00128 396 CDD Bbox1_BBX-like 29 72 - -
Bpe14g00128 396 Pfam B-box zinc finger 71 115 IPR000315 GO:0008270
Bpe14g00128 396 ProSiteProfiles CCT domain profile. 327 369 IPR010402 GO:0005515
Bpe14g00128 396 ProSiteProfiles Zinc finger B-box type profile. 25 72 IPR000315 GO:0008270
Bpe14g00128 396 Pfam CCT motif 327 369 IPR010402 GO:0005515
Bpe14g00128 396 ProSiteProfiles Zinc finger B-box type profile. 68 115 IPR000315 GO:0008270
Bpe14g00128 396 SMART bboxneu5 25 72 IPR000315 GO:0008270
Bpe14g00128 396 SMART bboxneu5 73 115 IPR000315 GO:0008270
Bpe14g00128 396 CDD Bbox1_BBX-like 72 115 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00686 Bpe-Chr8:7847358 Bpe14g00128 Bpe-Chr14:1750730 2.66E-72 dispersed
Bpe13g01202 Bpe-Chr13:17372137 Bpe14g00128 Bpe-Chr14:1750730 5.70E-75 dispersed
Bpe14g00128 Bpe-Chr14:1750730 Bpe13g00423 Bpe-Chr13:11855165 1.11E-17 dispersed
Bpe15g00764 Bpe-Chr15:17989759 Bpe14g00128 Bpe-Chr14:1750730 1.67E-13 dispersed
Bpe14g00128 Bpe-Chr14:1750730 Bpe02g01272 Bpe-Chr2:16126093 9.41E-76 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22409 PF00643 zf-B_box 5.80E-06 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g00128 - - qlo:115975874 493.041