Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g00191 ATGGCTCGAGCAGTTCATCTCAGCTCAATCTTTTTAGTTTCATTGGCTTTGTTAGTCCGCACCCTTCATGCTGACATTGCCAACTTCGATGACTACTGGCTTCATCGAGCCCAGGAAGCCGAGAAGGCGGCACTCGAGGCCTACCAGGCCGACCCCTTCAACGTCACCGATCAATTCAATATTCATGTTCACAGGGTTGTGGCGGCTAGAGTGGGGACAAACAGCACGAGGAGGAACCTGAGAGGATCAAACAAACACAAAGGTCGATGTGTGGCCACAAATCCAATTGATCGATGCTGGCGGTGCGACAAGAACTGGGCCATGAACCGTAAGCGTCTAGCTAGGTGCGCGCTCGGGTTCGGGAGGAGGGCAACCGGAGGACTCAAAGGTCGCATTTACGTCGTCACTGACCCATCAGACTCCAACGTCCTGAACCCTAAACCTGGAACCCTCCGCCACGCAGTGATTCAGAAACAGCCGCTCTGGATCATCTTCGCAAGGAGCATGGTCATTAAACTCTCGAAGGAGCTGATGATCACGAGCCACAAGACGATTGACGCTCGAGGGGCGAAGGTTCACATCGCTTACGGGGCCGGACTGACTATCCAATTTGTGAGGAATGTTATAATTCATGGGCTTCGTATACATGATATTGTGGCAGCTTCAGGCGGGATGATAAGGGATTCTGTTGAACATTATGGGCTCAGAACAGCCAGTGACGGAGATGGGATTTCTATATTTGGAGCAACCGACGTATGGCTTGACCATCTTTCCATGTCCAAATGCCAAGATGGATTGATCGACGCCATTCAAGGATCGACGGCCATCACTATCTCGAATTCCCACTTCACCGAGCACAATGATGTGATGCTGTTCGGCGCCAGCGACGCCTACAGAGGGGACAAGATTATGCAAGTGACGGTGGCGTTCAACCATTTCGGAAAAGGGTTGGTGCAGAGAATGCCGAGATGCAGGTGGGGGTTCGTCCACGTCGTAAACAATGACTATACCCACTGGCTAATGTACGCCATCGGAGGAAGCTCCGAACCCACCATTATCAGCCAAGGCAACCGGTTCATCGCTCCCCCCAACCTGGCTGCAAAAGAGGTGACGAAGAGAGACTACGCCCCGAAAAGCGTCTGGCAGAACTGGAACTGGCGGTCACAGGGCGACCTGATGAAGAACGGAGCTTTCTTCGTCCAATCTGGAAAGCCTTTGACAATCAAGCCATTTAGCAGGCACGACATGATAAAAGCCAAGCCCGGGAATTTTGTTGGGAGGCTTACTCGCTTCTCTGGCTCGCTCAGCTGCCGGGTGGGTCGGCCATGTTAG 1332 52.7 MARAVHLSSIFLVSLALLVRTLHADIANFDDYWLHRAQEAEKAALEAYQADPFNVTDQFNIHVHRVVAARVGTNSTRRNLRGSNKHKGRCVATNPIDRCWRCDKNWAMNRKRLARCALGFGRRATGGLKGRIYVVTDPSDSNVLNPKPGTLRHAVIQKQPLWIIFARSMVIKLSKELMITSHKTIDARGAKVHIAYGAGLTIQFVRNVIIHGLRIHDIVAASGGMIRDSVEHYGLRTASDGDGISIFGATDVWLDHLSMSKCQDGLIDAIQGSTAITISNSHFTEHNDVMLFGASDAYRGDKIMQVTVAFNHFGKGLVQRMPRCRWGFVHVVNNDYTHWLMYAIGGSSEPTIISQGNRFIAPPNLAAKEVTKRDYAPKSVWQNWNWRSQGDLMKNGAFFVQSGKPLTIKPFSRHDMIKAKPGNFVGRLTRFSGSLSCRVGRPC 443
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2222322 2223989 - Bpe006844.1 Bpe14g00191 114500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g00191 443 PANTHER PECTATE LYASE 7 443 - -
Bpe14g00191 443 SMART amb_all 168 365 IPR002022 -
Bpe14g00191 443 PANTHER PECTATE LYASE 18-RELATED 7 443 IPR045032 GO:0030570
Bpe14g00191 443 Pfam Pectate lyase, N terminus 26 80 IPR007524 GO:0030570
Bpe14g00191 443 Gene3D - 93 436 IPR012334 -
Bpe14g00191 443 PRINTS Pollen allergen Amb family signature 140 165 IPR018082 -
Bpe14g00191 443 PRINTS Pollen allergen Amb family signature 342 361 IPR018082 -
Bpe14g00191 443 PRINTS Pollen allergen Amb family signature 176 192 IPR018082 -
Bpe14g00191 443 PRINTS Pollen allergen Amb family signature 320 339 IPR018082 -
Bpe14g00191 443 PRINTS Pollen allergen Amb family signature 414 437 IPR018082 -
Bpe14g00191 443 PRINTS Pollen allergen Amb family signature 116 133 IPR018082 -
Bpe14g00191 443 PRINTS Pollen allergen Amb family signature 384 408 IPR018082 -
Bpe14g00191 443 PRINTS Pollen allergen Amb family signature 240 261 IPR018082 -
Bpe14g00191 443 SUPERFAMILY Pectin lyase-like 94 433 IPR011050 -
Bpe14g00191 443 Pfam Pectate lyase 181 359 IPR002022 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g01467 Bpe14g00191 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe13g01430 Bpe-Chr13:19581657 Bpe14g00191 Bpe-Chr14:2222322 0 dispersed
Bpe14g00191 Bpe-Chr14:2222322 Bpe08g00306 Bpe-Chr8:1832348 6.13E-166 dispersed
Bpe13g00464 Bpe-Chr13:12165144 Bpe14g00191 Bpe-Chr14:2222322 0 wgd
Bpe14g00191 Bpe-Chr14:2222322 Bpe02g01467 Bpe-Chr2:17989441 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g00191 K01728 - csv:101202789 691.804