Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g00247 ATGGAGACTCTATCGGAGAAAAAATTTCCAGTAAATGCAAATGATTATAAGTTGTACGAAGAAGTTGGTGAAGGTGTCAGCGCCACTGTTTATAGGGCTCTCTGCATACCACTAAATGAGATTGTTGCTATTAAGGTTCTAGATTTGGAGAAATGCAATAATGACCTGGATGGTATAAGGAGAGAGGTACAAACAATGACCTTGATTTATCATACAAATGTACTACGAGCACATTGTTCTTTCACAACTGGCCACAGCCTTTGGGTTGTGATGCCATACATGGCTGGAGGGTCATGTCTTCATATAATGAAGTCTGCCTATCCAGAAGGTTTTGAAGAGCCTGTTATAGCTACTGTTTTGCGAGAGGTTCTCAAAGCTCTTGTTTATCTTCATGCCCATGGCCACATTCATAGGGATGTGAAGGCTGGGAATATTTTAGTTGATTTTAATGGATCAGTCAAGCTGGCTGACTTTGGAGTGTCAGCTTGTATGTTTGATGCCGGAGACAGACTAAGATCAAGAAATACTTTTGTTGGAACTCCTTGCTGGATGGCTCCAGAAGTTATGCAGCAGTTGCATGGATATGATTTTAAGGCAGACATCTGGTCATTGGGAATAACAGCGCTTGAACTTGCTCATGGTCATGCTCCATTTTCCAAGTATCCACCAATGAAAGTTTTACTAATGACACTACAAAATGCTCCTCCTGGGCTCGACTATGAAAGAGACAAGAGATTCTCAAAGTCCTTCAAGGAGATGGTAGCTTTATGCTTAGTAAAGGATCCGAAGAAACGTCCGACTTCAGAGAAGCTTCTTAAACATTCCTTTTTCAAACATGCACGCCAAAATGACTATATAGCTCGCACAATTCTTGAGGGCCTTGCTCCTTTGGGAGACCGTTTTAAGATGCTGAAGGCAAAAGAGGCTGAGCTTCTTGTGCAGAACAAAGCTATGTACGAAGATAAGGAGCAATTATCACAGCAAGAGTACATTCGAGGAATTAGTGCCTGGAACTTCAATCTTGAGGATTTGAAAAATCAGGCTGCCCTTATTCAGGATGTTGATGTTGCATATGCAGAAGATCAGGACTTTGGTAAGATGCAACATGAGAAGAATGATTCTTCTGGCTTCCACGTTGAGAGGTCATACATTGAGAAAATGAAACATTTAAATCCCAGACCTAGTCAGGAGGATGAGTTCAATGAGCTTCATGATTTGTCAAGTTCACTTGCTTCAATGCCAGCTAAGCCTCTTGAAGCACTAAGGCATGACTATTTTTGTTGTTTTGACATTTGTGATGATGATATAAAAGCAATTATTCCGCGAGCTTTGGATCAAGAAAATGGATCCAAGGACGAGTGTTCTGGTCAAAATAGTTCATTACGTCGTGATATGCTTGAGCAGAAAAAGTACATTAGTGACTCCCTCCCTCCTGATAGAGCCATTTCTTCCAAAAAGGTTACTAACGACGGTGATAGGGATAATCTTCAGTCAAAACATTCAGTGGAGCGGAACTATAGTGGTTCATCGTTGTATCCTCAAAGAAGAGACATGACTAACCATTCATCTGTCGAGGATTTGTCAGAAGGAGCAATAGTGCAACACAAGGGCCGGTTTAAAGTCACTTCAGCAGACCTCAGTCCCAAGGGTCCGACATTAGGGTCACTAAATGCAGCTTCTGGATTTAATCCAGCAATCCTGAACCTGACAGCTGCTGCAGTTTTTCCATCACTGCAAAGTATTTTGCAGAAACACACCATGCAAAGGGTTTGTGCTAATTTTGAATATATCTTATTTCTTGAATGA 1806 41.25 METLSEKKFPVNANDYKLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMTLIYHTNVLRAHCSFTTGHSLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATVLREVLKALVYLHAHGHIHRDVKAGNILVDFNGSVKLADFGVSACMFDAGDRLRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSLGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKEMVALCLVKDPKKRPTSEKLLKHSFFKHARQNDYIARTILEGLAPLGDRFKMLKAKEAELLVQNKAMYEDKEQLSQQEYIRGISAWNFNLEDLKNQAALIQDVDVAYAEDQDFGKMQHEKNDSSGFHVERSYIEKMKHLNPRPSQEDEFNELHDLSSSLASMPAKPLEALRHDYFCCFDICDDDIKAIIPRALDQENGSKDECSGQNSSLRRDMLEQKKYISDSLPPDRAISSKKVTNDGDRDNLQSKHSVERNYSGSSLYPQRRDMTNHSSVEDLSEGAIVQHKGRFKVTSADLSPKGPTLGSLNAASGFNPAILNLTAAAVFPSLQSILQKHTMQRVCANFEYILFLE 601
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2619583 2624591 - Bpe006902.1 Bpe14g00247 114556

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g00247 601 ProSiteProfiles Protein kinase domain profile. 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe14g00247 601 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 589 - -
Bpe14g00247 601 MobiDBLite consensus disorder prediction 485 500 - -
Bpe14g00247 601 SUPERFAMILY Protein kinase-like (PK-like) 13 317 IPR011009 -
Bpe14g00247 601 Gene3D Phosphorylase Kinase; domain 1 5 92 - -
Bpe14g00247 601 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 589 - -
Bpe14g00247 601 Gene3D Transferase(Phosphotransferase) domain 1 97 330 - -
Bpe14g00247 601 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Bpe14g00247 601 SMART serkin_6 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe14g00247 601 CDD STKc_OSR1_SPAK 14 277 - -
Bpe14g00247 601 MobiDBLite consensus disorder prediction 472 527 - -
Bpe14g00247 601 Pfam Protein kinase domain 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe14g00247 601 MobiDBLite consensus disorder prediction 501 518 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g00247 K08835 OXSR1, STK39; serine/threonine-protein kinase OSR1/STK39 [EC:2.7.11.1] - qsu:112040585 866.685
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bpe02g01494 Bpe14g00247 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe06g00667 Bpe-Chr6:17359297 Bpe14g00247 Bpe-Chr14:2619583 0 dispersed
Bpe10g00590 Bpe-Chr10:12838124 Bpe14g00247 Bpe-Chr14:2619583 0 dispersed
Bpe14g00247 Bpe-Chr14:2619583 Bpe06g00295 Bpe-Chr6:14077626 3.57E-41 dispersed
Bpe05g00502 Bpe-Chr5:19212117 Bpe14g00247 Bpe-Chr14:2619583 1.02E-179 transposed
Bpe11g00463 Bpe-Chr11:3584914 Bpe14g00247 Bpe-Chr14:2619583 9.00E-71 transposed
Bpe14g00247 Bpe-Chr14:2619583 Bpe02g01494 Bpe-Chr2:18211836 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi14g1310 . . . Bda13g01619 . Bpe14g00247 . . Cmo14g00685 . . Cma14g00668 . Car14g00608 . Cpe03g00581 . . . . . . . . Cla10g01325 Cam10g1289 Cec10g1402 Cco10g1377 Clacu10g1380 Cmu10g2151 Cre10g1535 . . . . . . Chy04g01430 Cme04g01845 Blo17g00301 . . . . . . . . . . . . . . . . Bhi11g01602 . . . Hepe02g1784 . . . . . . . . . . Csa03g03971 . .
Vvi14g1350 . . Bda01g01279 Bda13g01619 Bpe02g01494 Bpe14g00247 . . . . . . . . Sed02g1388 . Cpe13g00900 Bhi06g00518 Tan11g0629 Cmetu09g0153 . . . . . . . . . . . Cone11ag0114 Cone18ag1363 . . Lsi02g01568 Csa05g01916 . . Blo17g00301 Blo18g00333 . . . . Bma01g00975 . . Cmo04g02836 Cmo15g00350 Cma04g02707 Cma15g00341 Car04g02610 Car15g00325 . Cpe01g02349 . . . . . . . Cla09g01858 Cam09g1954 Cec09g2018 Cco09g2111 . . . . . Chy09g00338 Cme09g00387
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bpe11g00463 . 1 699 MAP Kinase Kinase Kinase Kinase AT1G53165 61.5 5.6e-220 760.8
Bpe02g02311 . 223 488 MAP Kinase Kinase Kinase Kinase AT1G53165 50.9 2.9e-67 253.4
Bpe11g00463 . 1 696 MAP Kinase Kinase Kinase Kinase AT3G15220 64.4 3.9e-237 817.8
Bpe02g02311 . 223 488 MAP Kinase Kinase Kinase Kinase AT3G15220 50.2 8.4e-67 251.9
Bpe02g02311 . 9 792 MAP Kinase Kinase Kinase Kinase AT1G69220 56.2 6.3e-223 770.8
Bpe11g00463 . 23 267 MAP Kinase Kinase Kinase Kinase AT1G69220 52.8 1.8e-68 257.7
Bpe14g00247 BCT 1 589 MAP Kinase Kinase Kinase Kinase AT5G14720 67.0 1.9e-225 778.9
Bpe02g01494 BCT 1 595 MAP Kinase Kinase Kinase Kinase AT5G14720 64.3 1.1e-215 746.5
Bpe10g00590 BCT 3 352 MAP Kinase Kinase Kinase Kinase AT5G14720 69.7 7.8e-150 527.7
Bpe06g00667 BCT 3 352 MAP Kinase Kinase Kinase Kinase AT5G14720 69.7 3.9e-149 525.4
Bpe05g00502 . 5 705 MAP Kinase Kinase Kinase Kinase AT4G24100 65.7 1.2e-249 859.4
Bpe14g00247 BCT 6 355 MAP Kinase Kinase Kinase Kinase AT4G24100 66.0 1.8e-136 483.4
Bpe02g01494 BCT 9 355 MAP Kinase Kinase Kinase Kinase AT4G24100 66.6 2.6e-135 479.6
Bpe10g00590 BCT 2 353 MAP Kinase Kinase Kinase Kinase AT4G24100 65.1 9.9e-135 477.6
Bpe06g00667 BCT 2 353 MAP Kinase Kinase Kinase Kinase AT4G24100 64.2 1.9e-133 473.4
Bpe05g00502 . 6 706 MAP Kinase Kinase Kinase Kinase AT4G10730 65.9 1.5e-249 859.0
Bpe14g00247 BCT 7 376 MAP Kinase Kinase Kinase Kinase AT4G10730 64.3 1.7e-139 493.4
Bpe10g00590 BCT 4 360 MAP Kinase Kinase Kinase Kinase AT4G10730 66.1 6.3e-139 491.5
Bpe06g00667 BCT 4 358 MAP Kinase Kinase Kinase Kinase AT4G10730 65.6 1.2e-137 487.3
Bpe02g01494 BCT 9 356 MAP Kinase Kinase Kinase Kinase AT4G10730 67.5 2.7e-137 486.1
Bpe14g00247 BCT 5 351 MAP Kinase Kinase Kinase Kinase AT1G70430 71.8 3.6e-146 515.4
Bpe02g01494 BCT 1 420 MAP Kinase Kinase Kinase Kinase AT1G70430 61.8 3.9e-145 511.9
Bpe06g00667 BCT 4 404 MAP Kinase Kinase Kinase Kinase AT1G70430 55.3 1.1e-128 457.2
Bpe10g00590 BCT 4 364 MAP Kinase Kinase Kinase Kinase AT1G70430 59.3 6.3e-127 451.4
Bpe05g00502 . 2 356 MAP Kinase Kinase Kinase Kinase AT1G70430 59.7 5.2e-121 431.8
Bpe06g00667 BCT 1 378 MAP Kinase Kinase Kinase Kinase AT1G79640 83.3 3.9e-186 648.3
Bpe10g00590 BCT 1 382 MAP Kinase Kinase Kinase Kinase AT1G79640 80.6 7.6e-182 634.0
Bpe14g00247 BCT 4 360 MAP Kinase Kinase Kinase Kinase AT1G79640 69.2 4.5e-150 528.5
Bpe02g01494 BCT 1 328 MAP Kinase Kinase Kinase Kinase AT1G23700 57.4 6.9e-100 361.3
Bpe14g00247 BCT 1 328 MAP Kinase Kinase Kinase Kinase AT1G23700 56.5 2.9e-98 355.9
Bpe10g00590 BCT 5 324 MAP Kinase Kinase Kinase Kinase AT1G23700 52.6 2.3e-87 319.7
Bpe06g00667 BCT 5 324 MAP Kinase Kinase Kinase Kinase AT1G23700 51.4 1.3e-85 313.9
Bpe05g00502 . 14 303 MAP Kinase Kinase Kinase Kinase AT1G23700 51.5 3.3e-78 289.3
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003111 2 8 2 1 2 1 3 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 2 1 1 3 2 2 51
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63708 PF00069 Pkinase 1.40E-57 CL0016 Bpe PK
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe14g00247 Bpe_Chr14 FPKM 0.46468 0.829173 0.088746 0.150316 0.318803 0.0 0.313011 0.24699 0.356306 0.271268