Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g00276 ATGGACGGGCCTGTTCCGTACAATCCTCGTACGGTCGAGGAGGTGTTTACGGATTTCAAGGGTCGTAGAGCTGGCATGCTTAAAGCCCTCACTACTGATGTCGAAAGCTTCTACCATCAGTGCGATCCCGAAAAAGAAAATCTGTGTCTTTATGGATATCCTGGTGGGCAATGGGAAGTCAATTTACCCGCCGAAGAGGTCCCTCCAGAGCTTCCAGAACCAGCATTAGGAATTAATTTTGCCAGGGATGGGATGGAAGAAAAAGATTGGTTATCCCTAGTTGCTGTTCATAGTGATATCTGGTTAAATGCTGTTGCCTTTTATTTTGGAGCTCGGTTTGGATTTGACAAAAATGACAGGAAACGCCTTTTTAATATGATCAATGAGTTTCCGACAATATTCGAGGTCGTGACGGGAACGGCCAAAAAACAAGCAAAAGATAAATCATCAGTTTCAAATCTCAGCAGTAACAAATCCAAAACTAGTGCAAAGCGGGGTTCTGAATCTCATGAAAAGCCAATGCAAATGAACGACGAGGATGAAGAGGGATTGGAAGAGGAAGACAATGAAGAGCTTGGAGACACTCTTTGCGGTGCTTGTGGGGACAACTATGCATCAGATGAATTCTGGATTTGCTGTGACATCTGTGAGGTGTGGTTCCATGGTAAGTGTGTCAAAATCACCCCAGCAAAGGCAGAGCACATTAAGCAGTACAAATGTCCTTCTTGCAGCAACAAGAGAGCTCGAACTTGA 753 44.49 MDGPVPYNPRTVEEVFTDFKGRRAGMLKALTTDVESFYHQCDPEKENLCLYGYPGGQWEVNLPAEEVPPELPEPALGINFARDGMEEKDWLSLVAVHSDIWLNAVAFYFGARFGFDKNDRKRLFNMINEFPTIFEVVTGTAKKQAKDKSSVSNLSSNKSKTSAKRGSESHEKPMQMNDEDEEGLEEEDNEELGDTLCGACGDNYASDEFWICCDICEVWFHGKCVKITPAKAEHIKQYKCPSCSNKRART 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2783384 2785911 - Bpe006929.1 Bpe14g00276 114585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g00276 250 PANTHER CPG BINDING PROTEIN 4 249 IPR045104 GO:0006355|GO:0042393
Bpe14g00276 250 SMART PHD_3 196 244 IPR001965 -
Bpe14g00276 250 CDD PHD_AL_plant 196 246 IPR044104 -
Bpe14g00276 250 Pfam Alfin 11 139 IPR021998 GO:0006355|GO:0042393
Bpe14g00276 250 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 186 245 IPR013083 -
Bpe14g00276 250 SUPERFAMILY FYVE/PHD zinc finger 188 247 IPR011011 -
Bpe14g00276 250 Pfam PHD-finger 197 246 IPR019787 -
Bpe14g00276 250 ProSiteProfiles Zinc finger PHD-type profile. 194 246 IPR019787 -
Bpe14g00276 250 PANTHER PHD FINGER PROTEIN ALFIN-LIKE 3-LIKE ISOFORM X1 4 249 - -
Bpe14g00276 250 MobiDBLite consensus disorder prediction 147 188 - -
Bpe14g00276 250 MobiDBLite consensus disorder prediction 163 177 - -
Bpe14g00276 250 ProSitePatterns Zinc finger PHD-type signature. 197 243 IPR019786 -
Bpe14g00276 250 MobiDBLite consensus disorder prediction 147 162 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g00502 Bpe14g00276 CCT
Bpe02g00502 Bpe14g00276 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g02185 Bpe-Chr2:23047068 Bpe14g00276 Bpe-Chr14:2783384 7.25E-129 dispersed
Bpe04g01807 Bpe-Chr4:23499448 Bpe14g00276 Bpe-Chr14:2783384 1.09E-90 dispersed
Bpe05g00728 Bpe-Chr5:20777447 Bpe14g00276 Bpe-Chr14:2783384 1.04E-110 dispersed
Bpe13g01240 Bpe-Chr13:17643801 Bpe14g00276 Bpe-Chr14:2783384 1.81E-125 dispersed
Bpe14g00276 Bpe-Chr14:2783384 Bpe02g00502 Bpe-Chr2:3263991 1.82E-102 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22422 PF12165 Alfin 2.50E-67 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g00276 - - vvi:100247536 426.402