Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g00280 GTCAGGATTTGGTGTTGCTTATGCTTTACTGCAGGAGAAGACGAAGCGGAAGAGGGAGATAGAGAGATTACCATGAGGAAGGATGGGGTAGAAAGTGAGGGAAATCCCGAGGATTTTCTTGAAATTGACGATGAAAATGGATTAGGGCTTGTTGTTGATAGGCCTGCGCCTGATGAAAGAAGCATGTTGAGAGTGTTTCAGGAGACGGATAGAGCAATGCCAGGTGATGCCGATGGTCATTGTGAGGTGGGTTTAACTTCTCCCGCACTTAACCTTTGGGAGTTTGGCGTGAGCAGTAGTAGTTCAGCTTCGGGTGCAGCGACTTGGGTGGGGGAAAATTGTATCGAGGAGTCTGATCGCGATCCTTACCACAAGCGAGACAAAGTTCACTCTGATTCTTGTGGGTGCTCTTCTGCTTCTGAAATTTCTTCAGATGCTGGAAATGCTTCTTGCATGGATTTGAATTTTGATATTAGTCACGGATCCTCTCTTACATCTAAAACTGAGTGTGTGTATCAAGCTTTTACATTGATTAATGCCGGTGGTGATTTTAATTTTGGCTTCAGCAGTGGGAAAGATGACTCTGAGAGAAAGGACTCTAAAACAGAGAATTTAGAAATTCAGATGGATCTTACGGATGACTTGTTGCACATGGTTTTCTCTTTCTTGAACCACATAAATCTTTGCCGAGTTGCTAGTGTCTGTAGGCAATGGCGAGCGGCTAGTGCACATGAAGATTTTTGGAGGTGTTTGAATTTGAAGAATAGAAACATACCGGTTGACCAATTTGAGGACTTATGTCGGCGATATCCTAACGCCACAGAGGTTAATATATCTGGTGCTTGTGCTATTCGCTCTCTTGTTATGAAGGCAGTTGCTTCATTAAGTTTCACTCATCTTGCGATCTCTTTTTATACAGAAGTTATTTATATATTGATAAAAAGTGATTTGTTGCTGCCACTTACACATTCATATGTTCGTAGACATCTTGAAGTCTTAACTTTGGGGAAAGTTCTTCTGGGGTACACATTCTTCCATGCTTTAGCAGATTGCCAGACATTGAAGACGTTGAATGTTAATGATTCTACACTTGGTAATGGTATTCAAGAGATTCCGATAAACCATGATCGACTGCGGCATCTTTATCTGACAAAATGTCGGACAAAATGTCGAGTCATGTGCATATCTGTCAGGTGCCCACAACTTGAGACATTGTCTTTGAAGCGCAGCGATATGGCACGAGCTATACTTAATTGTCCTCTTTTGTGCGATCTAGATATAAGCTCTTGCCACATGCTTTCTGATGCTGCAATTCGTTCGGCAGCTATGTCATGTCCTCTATTAGAATCTTTAGATGTGTCAAAATGTTTGTGTATTAGCAACGAAACAATACGTGAAATAGCCCACCCTTGTCCAAATCTCCATATTTTGAATGCGTCATACTGCCCTCATATATCTTTGGAGTCTGTTAGGCTGCCAATGTTGACAGTACTAAAGCTTCACAGCTGTGAGGGTATTACTTTGGCATCAATGACTGCAATATCCCGATTTTATCTGCTCGAGGTTTTGGAGCTTGACAATTGTACCCTTCTAACTTCTGTGTCCTTGGACCTTCCATGCTTGCGTAGTATTCGCCTCGGTCATTGTCTCAAATTTGCTGATCTGAATTTACGGACTGTCGTGCTATCATCCATTATGGTGTCTAATTGTCCGGCCCTCCACCACATCAACATCACATCAAATGCACTTCAAAAATTAGCATTGCAGAACCTAGAAAGCTTAATTACCTTGGCTCTGCAATGCCCAAGTTTGCTGGAAGTGGACCTCACTGATTGTGAATCTCTCATCTGTGAGGTTTTTGGTGATGGTGGTGGGTGCCCTGTGCTGAAGACTGTAGTTCTCGATAATTGTGTGAGTTTGACAGCAGTCCAATTTTGCAGCACCTCCTTAGTTAGTCTTTCTCTTGTCGGTTGTCGGGCCATCACAACTCTCCAGCTTACATGCCCCATCCTTGAGAGTGTGTGTTTAGATGGATGTGATAATCTTGAAATGGCATCATTTTGTCCTGTAAGCAATAATTGTTTATTTGGTTTGCTGATTTCCTACCCATGTATAACTGTGATTTTTGATTTTCTCTTTCAGGTTGGTCTAAGATCACTTAATCTGGGTATATGTCCCAAATTGAATGAACTTAGAATTAAAGCCCCTCATATGGCTATACTCGAGCTTAAAGGCTGTGGAGAGTTATCCGAAGCATCCATTGACTGTCCATTGTTGTCATCACTTGATGCTTCTTTTTGCAGCCTACTGCAGGATGACTGCTTGTCTGCAACGGCTGCTTCGTGTCTGGAGTCTTTAATATTGATGTCTTGTCCGAATGTTGGTCCAGATGCACTATACTCATTGGGTCATCTTTCGCGCTTGATCATTCTTGACTTGTCGTATACCTTTTTGATGAACTTAAAGCCGGTCTTTGAGTCTTGTATGCAACTGAAGGTGTTGAAGTTGCAAGCTTGCAAGTACTTAACTGACTCATCTCTGGAACCTCTTTACAAAGAAGGTGCTCTTCCAGCTTTGCGGGAATTGGACTTATCGTACGGGACTTTCCGCCAGTCATCTATGGAGGAGCTTCTCGCCTGCTGCACCCATCTCACTCATGTTAGCCTGAATGGCTGTGTGAATATGCATGATCTAAATTGGAGCTGCCATGACAGAAAGCTATCTGAGTTGTACAGAGTAGACAGCTCCTCTTCTCGGGTTTCTGCTTTGGATGTCGTGGAGCCAACCGAAGGAGCAAATCGCTTATTGCAAAACCTCAACTGTGTTGGCTGTCCAAATATTAGGAAAGTTCTCATTCCCCCATGGGCAAGGTGTTTCGACCTGTCGTCTCTGAACCTTTCTCTATCTTCCAATTTGAGGGAAGTTGATGTTTCTTGCTTCACTCTGTGCTTTCTCAATTTAAGGTTTGAACCTATTCCAGCTTGTAAGCTGAAGTTTTTTCTTGATTTCTGTGCTGATAAATTATTTTATTTGTCTGTCAGCAATTGTTGCTCGGTGGAAGTCTTGAGATTGGACTGCCCCAAATTGAGTAGTCTCTTTCTTCAGTCGTGCAACATTGACGAAGAAGCTGTTGAAGCTGCCATAGCCAAATGTAGCATGCTCGAGACCTTGGACGTCCGCTTTTGCCCGAAGATTTCCTCGCTGAGCATGAATCGAATGCGGATGGCTTGCTCGAGTTTTAAGCGGATCTTCAGCAGTTTGTCTCCCATATGA 3273 42.96 VRIWCCLCFTAGEDEAEEGDREITMRKDGVESEGNPEDFLEIDDENGLGLVVDRPAPDERSMLRVFQETDRAMPGDADGHCEVGLTSPALNLWEFGVSSSSSASGAATWVGENCIEESDRDPYHKRDKVHSDSCGCSSASEISSDAGNASCMDLNFDISHGSSLTSKTECVYQAFTLINAGGDFNFGFSSGKDDSERKDSKTENLEIQMDLTDDLLHMVFSFLNHINLCRVASVCRQWRAASAHEDFWRCLNLKNRNIPVDQFEDLCRRYPNATEVNISGACAIRSLVMKAVASLSFTHLAISFYTEVIYILIKSDLLLPLTHSYVRRHLEVLTLGKVLLGYTFFHALADCQTLKTLNVNDSTLGNGIQEIPINHDRLRHLYLTKCRTKCRVMCISVRCPQLETLSLKRSDMARAILNCPLLCDLDISSCHMLSDAAIRSAAMSCPLLESLDVSKCLCISNETIREIAHPCPNLHILNASYCPHISLESVRLPMLTVLKLHSCEGITLASMTAISRFYLLEVLELDNCTLLTSVSLDLPCLRSIRLGHCLKFADLNLRTVVLSSIMVSNCPALHHINITSNALQKLALQNLESLITLALQCPSLLEVDLTDCESLICEVFGDGGGCPVLKTVVLDNCVSLTAVQFCSTSLVSLSLVGCRAITTLQLTCPILESVCLDGCDNLEMASFCPVSNNCLFGLLISYPCITVIFDFLFQVGLRSLNLGICPKLNELRIKAPHMAILELKGCGELSEASIDCPLLSSLDASFCSLLQDDCLSATAASCLESLILMSCPNVGPDALYSLGHLSRLIILDLSYTFLMNLKPVFESCMQLKVLKLQACKYLTDSSLEPLYKEGALPALRELDLSYGTFRQSSMEELLACCTHLTHVSLNGCVNMHDLNWSCHDRKLSELYRVDSSSSRVSALDVVEPTEGANRLLQNLNCVGCPNIRKVLIPPWARCFDLSSLNLSLSSNLREVDVSCFTLCFLNLRFEPIPACKLKFFLDFCADKLFYLSVSNCCSVEVLRLDCPKLSSLFLQSCNIDEEAVEAAIAKCSMLETLDVRFCPKISSLSMNRMRMACSSFKRIFSSLSPI 1090
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2801640 2807960 + Bpe006933.2 Bpe14g00280 114589

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g00280 1090 Gene3D Ribonuclease Inhibitor 820 901 IPR032675 -
Bpe14g00280 1090 ProSiteProfiles F-box domain profile. 205 251 IPR001810 GO:0005515
Bpe14g00280 1090 SUPERFAMILY L domain-like 781 1083 - -
Bpe14g00280 1090 Pfam F-box-like 213 253 IPR001810 GO:0005515
Bpe14g00280 1090 SMART fbox_2 211 251 IPR001810 GO:0005515
Bpe14g00280 1090 PANTHER OS10G0396666 PROTEIN 116 987 IPR044703 GO:0010252|GO:1905393
Bpe14g00280 1090 SUPERFAMILY F-box domain 209 268 IPR036047 GO:0005515
Bpe14g00280 1090 Gene3D Ribonuclease Inhibitor 459 639 IPR032675 -
Bpe14g00280 1090 Gene3D Ribonuclease Inhibitor 201 458 IPR032675 -
Bpe14g00280 1090 Gene3D Ribonuclease Inhibitor 642 819 IPR032675 -
Bpe14g00280 1090 Gene3D Ribonuclease Inhibitor 902 1086 IPR032675 -
Bpe14g00280 1090 PANTHER OS10G0396666 PROTEIN 1008 1051 IPR044703 GO:0010252|GO:1905393
Bpe14g00280 1090 SUPERFAMILY RNI-like 260 487 - -
Bpe14g00280 1090 SMART LRR_CC_2 1026 1050 IPR006553 -
Bpe14g00280 1090 SMART LRR_CC_2 492 517 IPR006553 -
Bpe14g00280 1090 SMART LRR_CC_2 1051 1076 IPR006553 -
Bpe14g00280 1090 SMART LRR_CC_2 668 693 IPR006553 -
Bpe14g00280 1090 SMART LRR_CC_2 828 853 IPR006553 -
Bpe14g00280 1090 SMART LRR_CC_2 471 491 IPR006553 -
Bpe14g00280 1090 SMART LRR_CC_2 782 805 IPR006553 -
Bpe14g00280 1090 SMART LRR_CC_2 756 781 IPR006553 -
Bpe14g00280 1090 SMART LRR_CC_2 419 444 IPR006553 -
Bpe14g00280 1090 SMART LRR_CC_2 626 656 IPR006553 -
Bpe14g00280 1090 SMART LRR_CC_2 445 470 IPR006553 -
Bpe14g00280 1090 SMART LRR_CC_2 570 594 IPR006553 -
Bpe14g00280 1090 PANTHER OS10G0396666 PROTEIN 116 987 - -
Bpe14g00280 1090 PANTHER OS10G0396666 PROTEIN 1008 1051 - -
Bpe14g00280 1090 SUPERFAMILY L domain-like 458 772 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g00280 - - - qsu:111997858 1271.91
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bpe02g01559 Bpe14g00280 CCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe14g00280 Bpe-Chr14:2801640 Bpe02g00562 Bpe-Chr2:3625391 1.14E-14 dispersed
Bpe14g00280 Bpe-Chr14:2801640 Bpe02g01559 Bpe-Chr2:18592132 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g161 . . . . Bpe02g01559 . . . . . . . Car09g00313 . . . Cpe06g00258 . . . . . . . Cla05g01626 . . . Clacu05g1726 . Cre05g1739 . . . . Lsi04g01388 . . . Blo17g00273 Blo18g00056 Bda01g01346 Bda13g01586 Bpe14g00280 . Bma01g00911 Bma02g00548 Sed05g1794 Cmo01g01810 . . . Car01g01319 . . Cpe02g00290 Bhi09g03083 Tan01g3471 Cmetu07g1629 . Hepe01g1916 Mch11g0451 . . . . . . . . . . . Cme07g00176
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004724 2 1 1 2 2 1 2 1 1 1 1 1 2 1 1 1 1 4 2 1 1 1 1 1 1 1 1 4 1 1 42
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe14g00280 Bpe_Chr14 FPKM 14.352783 15.279086 19.455139 19.670326 20.940975 20.110771 23.232492 24.849113 25.450668 29.218353