Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g00296 ATGGTTTGCTCATGGAGTTTCTATGTTTATGTCATCACCCTCGTTTCGTATTCATTTCGGTGCCTGAAAACAGCCATTAACATGGCCTCGATCCTTGTTTCTTCCTCCTCTTCTGCTTTCAACCCTCCTTTCTCCTACGTTCGCCGGCTTTTCGAAGGGCCGGCTTCTGATCGTCGGAGAGACGAGGATGTCAATATGGTCGATGATTGTCGGGTTTTGACGGCTGAAGAACCGGTTTCTATGGACAAGGGTTTGAGTTCGCATGTTAAGTTGAAGAGGAGACCGGCAAAGATTGTGGTCCCTGAATTTTGTCCGGATTTGTTCGGTGGTCAGATGAAAAAGAAGATGGATGGGAGGGAGTTGATCGAGGTCCGAGGAAGAGATTTTTGTTTGGCTAGCAAGAGAGGAAGGAGAGAGGTAATGGAAGATAGCTATGCAGCCATGGTTGACGTCTTAGGCGATCAAAAACAGGCGTTTTTTGCCGTGATCGACGGGCATGGAGGGCGCAGTGCAGCTGACTACGTTGCTGAAAATCTGGGGAAAAACATAGTGAATGAACTTGCGATGGTTAATGGAGACGAAGAACTGGCAATTCGCAGAGGATATGAAGTTACAGACAAAGAGTTTCTTCGCCAGGGTGTAAGCAGCGGAGCATGCGTAGCAAGTGTACTAGTGAGAGGAGGAGAGTTGCATGTGGCAAATGTAGGCGATTGTAGAGCAGTGTTGAGCAGAAAGGGAAAGGCCCATCGTCTCACTGACGAACACCGGCTATGCCGGGAGGAAGAGCGGGTTCGGATCGAAAACTCAGGTGGTTTCGTGGATTGCCGAAATGGAGTTTGGAGAGTCCAAGGTTGTCTAGCAGTGTCTAGAGCCATTGGAGACCTTCACATGAAAGAGTTGATCATTTCAGAGCCTGAAATCATCAAGCTTCCTTTGACTCCAGATTGTCAATTCTTAATCATGGCTTCTGATGGATTATGGGATAAGCTAAATGAAGAGGAAGCTGTGGGTCTAGTTTGCAAATACTACAACGAAGGAGAGGATCCAATGAAGTGTTGTAGAGAACTAGTCGAGATGTCGTGCAGGAGAGGGAATCTCGACGACATAACCGTTATGGTCGTTGATCTCCAAAGCTTCCGTTGA 1143 47.51 MVCSWSFYVYVITLVSYSFRCLKTAINMASILVSSSSSAFNPPFSYVRRLFEGPASDRRRDEDVNMVDDCRVLTAEEPVSMDKGLSSHVKLKRRPAKIVVPEFCPDLFGGQMKKKMDGRELIEVRGRDFCLASKRGRREVMEDSYAAMVDVLGDQKQAFFAVIDGHGGRSAADYVAENLGKNIVNELAMVNGDEELAIRRGYEVTDKEFLRQGVSSGACVASVLVRGGELHVANVGDCRAVLSRKGKAHRLTDEHRLCREEERVRIENSGGFVDCRNGVWRVQGCLAVSRAIGDLHMKELIISEPEIIKLPLTPDCQFLIMASDGLWDKLNEEEAVGLVCKYYNEGEDPMKCCRELVEMSCRRGNLDDITVMVVDLQSFR 380
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2943164 2944913 - Bpe006946.1 Bpe14g00296 114605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g00296 380 SMART PP2C_4 118 374 IPR001932 -
Bpe14g00296 380 PANTHER PROTEIN PHOSPHATASE 2C 62 379 IPR015655 GO:0004722|GO:0006470
Bpe14g00296 380 SUPERFAMILY PP2C-like 128 377 IPR036457 -
Bpe14g00296 380 Pfam Protein phosphatase 2C 133 368 IPR001932 -
Bpe14g00296 380 SMART PP2C_SIG_2 140 376 IPR001932 -
Bpe14g00296 380 PANTHER PROTEIN PHOSPHATASE 2C 2-RELATED 62 379 - -
Bpe14g00296 380 Gene3D - 122 380 IPR036457 -
Bpe14g00296 380 CDD PP2Cc 127 376 IPR001932 -
Bpe14g00296 380 ProSiteProfiles PPM-type phosphatase domain profile. 128 376 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe14g00296 Bpe-Chr14:2943164 Bpe04g00100 Bpe-Chr4:714252 2.51E-50 dispersed
Bpe02g01829 Bpe-Chr2:20455154 Bpe14g00296 Bpe-Chr14:2943164 2.38E-26 transposed
Bpe04g01804 Bpe-Chr4:23486980 Bpe14g00296 Bpe-Chr14:2943164 7.28E-86 transposed
Bpe09g00573 Bpe-Chr9:14518416 Bpe14g00296 Bpe-Chr14:2943164 6.35E-26 transposed
Bpe14g00296 Bpe-Chr14:2943164 Bpe02g00524 Bpe-Chr2:3410677 1.97E-53 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g00296 K17506 - rcu:8277160 394.045