Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g00331 ATGGGATGGAGAGGGACTTTTTACTCTCTCTTTTTCCTTATCACTATTGTTGAGTCTTCAAGCAGATCAGGGAAGCTATGGCAACTCCACGGAAGTGCCGAAGTCCTAGGAGATTTCAGCTGGCCAATTTTCAGTGCGAGCATTTTTGTGCTCGTTGCACTTGTTCTCTCCACGTTTCTTATCTTTGAGCATTTAACTGCTTACAATCAGCCTGAGGAGCAGAAGTTTCTGATTGGTCTGATCTTGATGGTTCCTGTTTATGCAGTGGAATCGGTGAGAGATGTATTAAATATGTTTGATTTGCATATATGGATTTCTAGAGATAGCTATTTGCTCAATTCATGCTTAAAATCAATTTTCTCTTACCTCAATAATTTGTGGTCTAATATTTTGCTGCAGTTTTTATCGTTATTGGATTCAAATGCTGCATTCAACTGTGAAGTAATCCGGGATTGCTATGAAGCTTTTGCACTGTATTGCTTTGAAAGATATCTTATAGCATGCTTAGGTGGTGAGGAAAGTACAGTTGAGTTTATGGAGAGCCAGGGTGTAGTTGACTCCACCACTCCTCTTTTAAAAGAAAGATATGCGTATGGTGTTGTGGAACATCCCTTTCCTTTGAATTGTTTTATACAAGATTGGTATCTTGGTTCGAATTTCTATAATGCTGTGAAAATTGGCATTGTACAATATATGATCGTCAAGATGATCTGTGCACTTTTTGCTATGATTCTTCAAAGTTTTGGGGTTTACGGAGAAGGGAAGTTTGATTGGCGATATGGCTATCCATACTTGGCGGTTATACTTAATTTTAGTCAGACGTGGGCTTTATATTGTCTTGTACAGTTCTATACAGTCACAAAAGACAAATTGGAGCCAATCAAACCGTTGGCTAAGTTTTTGGTTGTCAAGTCAATTGTTTTCCTTACATGGTGGCAAGGAATCGCTATGGGTATTGGAGCTGTGGTGCACCTTTATGTCTTCCCTGCTGTACCTTATAAACGAGGAGAAAGATGTGTGCGGAACGTGGCTGTGATGACCGACTATGCATCAGCCGGAACACCTCCAGATCCCGAGGAGGTTAGAGACTGTGAGCGTTCAACTAGAATGCGTTTGGCTCGACCTGACGAGAGAGAAAAGCGTTTGAATTTTCCTCAAAGTGTTCGCAACGTGGTCATCGGAAGTGGGGAAATTATTGTTGATGACATGAGATATACAGTATCACACGTAGTAGAACCAGTCGAAAGGGGGATTGCGAGAATTAACAAGGCTTTCAAACAGATATCAGAAAATGTCAAGCGCCACGAAGAACGAAGGAGGAGCGTCAAGGATGATACTTATCTTATCCTCATGAATTCATGGACGAGAGAATTCCCAGAACACAATGTAATTGAAGGCAGTGTGAGCGACAGTGGGTTATCGAGCCGAAAGCGGCTGCACCCTCAATCTAAAGCCCCGGCCCCGTTGACTCCATCAAGAGCCACAACACGAAGATAA 1497 41.88 MGWRGTFYSLFFLITIVESSSRSGKLWQLHGSAEVLGDFSWPIFSASIFVLVALVLSTFLIFEHLTAYNQPEEQKFLIGLILMVPVYAVESVRDVLNMFDLHIWISRDSYLLNSCLKSIFSYLNNLWSNILLQFLSLLDSNAAFNCEVIRDCYEAFALYCFERYLIACLGGEESTVEFMESQGVVDSTTPLLKERYAYGVVEHPFPLNCFIQDWYLGSNFYNAVKIGIVQYMIVKMICALFAMILQSFGVYGEGKFDWRYGYPYLAVILNFSQTWALYCLVQFYTVTKDKLEPIKPLAKFLVVKSIVFLTWWQGIAMGIGAVVHLYVFPAVPYKRGERCVRNVAVMTDYASAGTPPDPEEVRDCERSTRMRLARPDEREKRLNFPQSVRNVVIGSGEIIVDDMRYTVSHVVEPVERGIARINKAFKQISENVKRHEERRRSVKDDTYLILMNSWTREFPEHNVIEGSVSDSGLSSRKRLHPQSKAPAPLTPSRATTRR 498
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3222967 3227664 + Bpe006984.2 Bpe14g00331 114640

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g00331 498 PANTHER ORGANIC SOLUTE TRANSPORTER SUBUNIT ALPHA-RELATED 15 98 - -
Bpe14g00331 498 PANTHER ORGANIC SOLUTE TRANSPORTER-RELATED 131 318 IPR005178 -
Bpe14g00331 498 PANTHER ORGANIC SOLUTE TRANSPORTER-RELATED 315 486 IPR005178 -
Bpe14g00331 498 Coils Coil 418 445 - -
Bpe14g00331 498 PANTHER ORGANIC SOLUTE TRANSPORTER-RELATED 15 98 IPR005178 -
Bpe14g00331 498 Pfam Organic solute transporter Ostalpha 133 319 IPR005178 -
Bpe14g00331 498 Pfam Organic solute transporter Ostalpha 44 96 IPR005178 -
Bpe14g00331 498 MobiDBLite consensus disorder prediction 467 498 - -
Bpe14g00331 498 PANTHER ORGANIC SOLUTE TRANSPORTER SUBUNIT ALPHA-RELATED 131 318 - -
Bpe14g00331 498 PANTHER ORGANIC SOLUTE TRANSPORTER SUBUNIT ALPHA-RELATED 315 486 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g00331 - - - tcc:18592546 710.294
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bpe02g01601 Bpe14g00331 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00014 Bpe-Chr3:136711 Bpe14g00331 Bpe-Chr14:3222967 1.78E-10 transposed
Bpe03g00822 Bpe-Chr3:28177170 Bpe14g00331 Bpe-Chr14:3222967 4.76E-20 transposed
Bpe12g00146 Bpe-Chr12:1059909 Bpe14g00331 Bpe-Chr14:3222967 1.05E-138 transposed
Bpe13g01223 Bpe-Chr13:17540195 Bpe14g00331 Bpe-Chr14:3222967 2.32E-85 transposed
Bpe14g00331 Bpe-Chr14:3222967 Bpe02g01601 Bpe-Chr2:18914178 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1222 . . . . . . . . Cmo04g02543 Cmo15g00626 . . . . . Cpe06g00929 . Bhi04g01815 Tan11g1185 . . . . . Cla08g00665 Cam08g1096 Cec08g0681 Cco08g0790 Clacu08g0802 . Cre08g0606 . . Cone17ag0797 Cone20ag0396 . . . Cme03g00394 . Blo18g00220 . Bda13g01530 Bpe02g01601 Bpe14g00331 Bma01g00869 . . . . . . Car04g02341 Car15g00570 . . . . . . . . . . . . . . . . Lsi08g00526 . Chy03g00590 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005100 4 4 1 1 2 1 2 0 1 1 0 1 2 1 1 2 1 2 0 1 1 1 1 1 1 1 1 2 3 1 41
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe14g00331 Bpe_Chr14 FPKM 7.660171 8.597563 11.352616 14.088224 15.595284 12.931575 14.531021 20.570091 21.152395 21.197599