Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g00362 ATGCCTGGTGGCCGATGTCACCGGCGGAAGAAAATGATGGGTAGGGGTGCGGACGGAGGTTGCGGCACTGAGGAACGGCCTTGCCCACTTTCTAGGGTTCCGGCCAGAATTCAGGGGTCTCAGCCGGCAATTGCTGAACGTGGTGCTTCTGTGTGCATTGATTTACTCTCGCAAGCGACTAAGATTCTGTCTGAGAGCTCGCCCTTTGATGTTGCCGACGAAATTTCAGCTTCCACAGTGCCCACTTTACCAATTGGATTAGCCAACTTTTTAAAGAGGCAGTTGGATAGTAGAAAACGGCATAAGAAGTCTCACCCGGTAGACGTCAAAAAGTCGGCTGTTGAGAAGTCTCGTAGTACTAGTTTTTGGACTGAATGTGAGGATTACTTTAGGGACGTGACATTGCATGATGTAGCCACTTTGTCTGAGATATCTTCTCACAAAGACTTGGCCTGCAGGAAGTGTTTTTGGATTCCAGTTTCTGCAAATTATTCTCAGGCAGGCGTTGATAATGGTGAGAATACCAGTGTTGAAGATACTAGTGAGTCTTTTGTCAATGAGGAGCTTACGAATGGTAATCAGCTTGATGTGGAAAGTGATGCCTTAACAGTTGGTAACTTATTGAGGCAGGTTGCTGGATGTGTTGATTCGGATTTGTCCCACAGCTTAGAGTGGCTTTTAGGTTGTCGAAATAAGGTATCTTTGACTTCAGAACGCCCTTCAAAGAAGCGGAAGCTTTTGGGTACAGACGCAGGCTTGGAGAAACTTTTGGTTGTCTGTCCATGTGAAGGAAATTTATCTTTATGCCACTTTTGCTCTAAAGCTGATACAGGGAAGGAGTTCAATCGACTAATAGTTTGTAGTAATTGCAAGTTGAATATTCACCAGAAGTGCTATGGGGTGCAAGATATTGATGGATCATGGCAATGTTCCTGGTGTACTCGAAAAGATAATAGCAGGGATTATCCGATGCATTGTGTACTTTGTCCAAAGTTGAATGGCGCTTTGAAACCTGTTCATACTAACGGTGAAAATGGAGGCCCTACAAAGTTTGCACATTTGTTTTGTAGCCTGTGGATGCCAGAAGTTTACATTGAGGATGTCGCACAGATGGAACCTATTATGAACGTGGAAGGTATAAAAGAAACCCGGGGAAGATTAGTCTGTAACATTTGCAAAGTAAAACACGGGGCTTGTCTTCAGTGCAGTCGTGGAACTTGTCGAACGTCTTTCCATCCTATATGTGCTAGGGAGGCTAGCCACAGAATGGAAATATGGGGAAGAGATGGGTCTGACAATGTTGAACTCCGAGCATTTTGCTCGAAGCACTCAAAAGTAGAGAATGCTGACAGTCCACAAGTAGAAGATCCTGCAGAGCCCGTTCTCAATGATTCTCTTGTTGTCAACCACCTTCCAGTGACGCTGTCAATTAACAGACCTCAAAAGTTGGTGATTGGTCGAAGAAATGGAGATAATTTGTCAGCCTGTGTGGATTCTTTGGATGAAAATTCTGAAAAATCTGTTGATAGCGATTCACAAGAGATGGAATTTTCAGATTCCAAATTTCTTCGAGGACTTGCATCTGATCATCTATCACAAACTGTGCAGTTAATTGATCGAGGAAAAGTCGATGTGAATGCCGTCGCGGTGGAGATTGGTGTATCATCTGATACATTGATCTCGAAACTTACTGGTAAAAACTTGTCTCCGGACCTAGGATCCAAAATAGTTAATTGGCTTCAAAATCATGCTTTTATGGGTACCTTGCAAAAAAATAGGAAACTGAGAATAAAATCTGCTGCTTTATCCAAGGCAACGAATGCAGCTGTTGATAAGCCTAGTGCATTACAAAGGCCTGAGTCTGATGTTCTGGATCCAGTCGATGTTATGTCGATTGTGCCACTGAGAAGGACCAAAAGTGATATGAGAGTTTTGAAAGATGAGCAAGTAACTGGCTCGTCTGAGGAACACTTAGGTGATGATGAGTTGGCGATAGAAAATGTTTGCATCAACCAACATGCAAGTGAAGAACCAGAAAATTTGAGTAAGTATTGCATTGTAGAGTCAGAATTCTTGGGGAAACTTTCCGCAGGAGATCGAATTGGGGAGCTTGTTGTTACAACCCCCAGTTTTTCATTGAGTGCAGATTGGGAAAATGTTATCTCTGAAGAAGTGAAACCTGCTATCAGTGATACGGTGAAACCAGGTGGATCTTCTAGTTTATACATTCACCCATATATACATCATAAATTGTTGCAAGTTCAGAGAGGGACACATCTGAAGAATGCAGTGCTAGATTCTGCTGGTAAGGTCTCTTTAAAAATGTGTCTTTCAGAATCATCATCAAGTGTCAGTTTAATTCACCAAAATCATCACTCGTGCAATGGCTCTGACTTGAAATCTAATGGATCAATTGTGGACCAGTTGGCAAAGGCTAGGGAAATGGACGTTCTAAAACTTTCACCCAAAGATGAATTGGAAGGAGAAATCATTTACTATCAGAATAGATTACTTGGCAATGCAGAAGCAAGAAAGAAGTTAACCGAACGCTTAACTTTTAATGTAACTAAGAGTCTGCCAAAGGAGATTGATACTGCAAGAGGTCGAATATGGGATGTGGTTCTTGTTAACCGGTATCTTTCTCAGCTTAGGGAGGCAAAGAAACAAGGCAAGAAGGAGAGAAAACATAAGGAGGCACAGGCTGTCTTGGCTGCGGCAACCGCTGCTGCTGCAAATTCTTCGAGGTCATCTCAGAGAAAAGATGTTTTTGAAGAATCTGCTCATCTGGAGCTGATGCCCCAAGCCAAAGAAGCACTTTCAACTGTTGCCCTGCCTAAACTTTCAACAGACAAGCAATCAGAATTTGTTCAATCTATCTCTGGATCTTCCAAAGATCATCCTCGAGCATGCGATGTCTGTAGACGTCCTGAGTCTATATTGAAGCCAATCTTAGTCTGTTCCAGTTGCAAGGTTGCAGTTCACTTGGACTGCTATTGTAGTGTTAAAGAGTCTTCAGGACCTTGGAATTGTGAATTATGTGAGGACTTATCGGCATCCAGAGGTTCTGGAGGATCGACTATTAATTTTTGGGACAAATCAAATTTTCTTGTGGAGTGTGGTTTATGTGGTGGCACCACTGGTGCTTTCCGGAAATCAACTGGTGGACAATGGGTCCATGCCTTTTGTGCTGAGTGGGTCCTGGAGTCAACATTCAGAAGGGGACAGGCAAATTCTGTGGAAGGAATGGAGACTGTTTTAACTGGAGTTGATATTTGCTATGTCTGTTGTCGCAAATATGGTGTCTGCATAAAGTGCAACTACGGTCATTGTCAGTCTACTTTCCATCCTTCCTGTGCCAGGACCGCGGGTCTCTTCATGAATATAAAGACTTCTGGTGGCAAGGTGCAGCACAAAGCTTACTGTGAAAAGCATAGCTCAGAGCAGAGGGCTAAGGCTGAAAACCAAACTTATGGAACTGAGGAGTTGAAAAGAATCAAGCATATCAGGGTTGAGTTAGAAAGGTTACGTCTTCTTTGTGAGAGGATCATCAAGCGTGAAAAGATAAAGCGCGACTTGGTTCTTTGTTCACATGACATTTTTATTTTCAAAAGAGACCACGCAGCAGGGGCTGCAATTGGACGTAATCCTCGCATCAATCACGAGGTTAGCACTGAATCGGCCACAACATCTCTGAAGGGACAAACAGATGATTTCAAATCCCGCAGTGATGCTGTCCAGAGATCAGATGATACAACTGTGGACAGCTCAGTTTCAGTCAAGCGTAGGACCAAAGTTCCTATATCTGTAGACACAGACCAAAAGACAGATGACGACAGTTCCACTTCCAAAAACCCATTTGCTCGAAAAAATTTAGGGAGCCCTCAATTTTCAGGTAAGCAGATTCCTAACAGAAGACCTGCAGCTGCAGATGGAGGACATCGGTTAAGATCTAGAAAGGCCGAAACTTTTCAAAAGGAGTTGTTGATGACTTCAGATCAAGCATCAATGAAGAACTCACTCTTACCAAAACAGTATCTATATGTTCCTGCTGATATGCTTACTAAGGAGAAGCAGATTAGCCAGGATGATGCTGCTCAAAAGCCAGCAGAAAGTGATGGATAA 4122 43.09 MPGGRCHRRKKMMGRGADGGCGTEERPCPLSRVPARIQGSQPAIAERGASVCIDLLSQATKILSESSPFDVADEISASTVPTLPIGLANFLKRQLDSRKRHKKSHPVDVKKSAVEKSRSTSFWTECEDYFRDVTLHDVATLSEISSHKDLACRKCFWIPVSANYSQAGVDNGENTSVEDTSESFVNEELTNGNQLDVESDALTVGNLLRQVAGCVDSDLSHSLEWLLGCRNKVSLTSERPSKKRKLLGTDAGLEKLLVVCPCEGNLSLCHFCSKADTGKEFNRLIVCSNCKLNIHQKCYGVQDIDGSWQCSWCTRKDNSRDYPMHCVLCPKLNGALKPVHTNGENGGPTKFAHLFCSLWMPEVYIEDVAQMEPIMNVEGIKETRGRLVCNICKVKHGACLQCSRGTCRTSFHPICAREASHRMEIWGRDGSDNVELRAFCSKHSKVENADSPQVEDPAEPVLNDSLVVNHLPVTLSINRPQKLVIGRRNGDNLSACVDSLDENSEKSVDSDSQEMEFSDSKFLRGLASDHLSQTVQLIDRGKVDVNAVAVEIGVSSDTLISKLTGKNLSPDLGSKIVNWLQNHAFMGTLQKNRKLRIKSAALSKATNAAVDKPSALQRPESDVLDPVDVMSIVPLRRTKSDMRVLKDEQVTGSSEEHLGDDELAIENVCINQHASEEPENLSKYCIVESEFLGKLSAGDRIGELVVTTPSFSLSADWENVISEEVKPAISDTVKPGGSSSLYIHPYIHHKLLQVQRGTHLKNAVLDSAGKVSLKMCLSESSSSVSLIHQNHHSCNGSDLKSNGSIVDQLAKAREMDVLKLSPKDELEGEIIYYQNRLLGNAEARKKLTERLTFNVTKSLPKEIDTARGRIWDVVLVNRYLSQLREAKKQGKKERKHKEAQAVLAAATAAAANSSRSSQRKDVFEESAHLELMPQAKEALSTVALPKLSTDKQSEFVQSISGSSKDHPRACDVCRRPESILKPILVCSSCKVAVHLDCYCSVKESSGPWNCELCEDLSASRGSGGSTINFWDKSNFLVECGLCGGTTGAFRKSTGGQWVHAFCAEWVLESTFRRGQANSVEGMETVLTGVDICYVCCRKYGVCIKCNYGHCQSTFHPSCARTAGLFMNIKTSGGKVQHKAYCEKHSSEQRAKAENQTYGTEELKRIKHIRVELERLRLLCERIIKREKIKRDLVLCSHDIFIFKRDHAAGAAIGRNPRINHEVSTESATTSLKGQTDDFKSRSDAVQRSDDTTVDSSVSVKRRTKVPISVDTDQKTDDDSSTSKNPFARKNLGSPQFSGKQIPNRRPAAADGGHRLRSRKAETFQKELLMTSDQASMKNSLLPKQYLYVPADMLTKEKQISQDDAAQKPAESDG 1373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3450469 3458880 - Bpe007017.1 Bpe14g00362 114671

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g00362 1373 ProSiteProfiles Extended PHD (ePHD) domain profile. 1036 1145 IPR034732 -
Bpe14g00362 1373 CDD PHD_SF 970 1013 - -
Bpe14g00362 1373 MobiDBLite consensus disorder prediction 1219 1317 - -
Bpe14g00362 1373 ProSiteProfiles Zinc finger PHD-type profile. 266 316 IPR019787 -
Bpe14g00362 1373 MobiDBLite consensus disorder prediction 1265 1283 - -
Bpe14g00362 1373 ProSitePatterns Zinc finger PHD-type signature. 970 1013 IPR019786 -
Bpe14g00362 1373 SUPERFAMILY FYVE/PHD zinc finger 962 1014 IPR011011 -
Bpe14g00362 1373 ProSiteProfiles Extended PHD (ePHD) domain profile. 323 444 IPR034732 -
Bpe14g00362 1373 ProSiteProfiles Zinc finger PHD-type profile. 967 1016 IPR019787 -
Bpe14g00362 1373 SUPERFAMILY FYVE/PHD zinc finger 262 332 IPR011011 -
Bpe14g00362 1373 MobiDBLite consensus disorder prediction 1284 1300 - -
Bpe14g00362 1373 MobiDBLite consensus disorder prediction 1 24 - -
Bpe14g00362 1373 CDD ePHD 1039 1144 - -
Bpe14g00362 1373 Coils Coil 880 900 - -
Bpe14g00362 1373 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 946 1022 IPR013083 -
Bpe14g00362 1373 PANTHER PHD-FINGER DOMAIN CONTAINING PROTEIN FAMILY-RELATED 215 1368 - -
Bpe14g00362 1373 PANTHER PHD FINGER PROTEINS 215 1368 - -
Bpe14g00362 1373 Pfam PHD-finger 982 1014 - -
Bpe14g00362 1373 Pfam PHD-finger 282 314 - -
Bpe14g00362 1373 SMART PHD_3 1091 1145 IPR001965 -
Bpe14g00362 1373 SMART PHD_3 969 1014 IPR001965 -
Bpe14g00362 1373 SMART PHD_3 388 444 IPR001965 -
Bpe14g00362 1373 SMART PHD_3 268 314 IPR001965 -
Bpe14g00362 1373 Pfam PHD-zinc-finger like domain 1038 1144 - -
Bpe14g00362 1373 Pfam PHD-zinc-finger like domain 325 443 - -
Bpe14g00362 1373 MobiDBLite consensus disorder prediction 1219 1235 - -
Bpe14g00362 1373 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 307 446 IPR013083 -
Bpe14g00362 1373 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1035 1147 IPR013083 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g00362 - - - csv:101212864 1400.19
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00788 Bpe-Chr5:21207818 Bpe14g00362 Bpe-Chr14:3450469 3.30E-13 dispersed
Bpe11g00434 Bpe-Chr11:3300071 Bpe14g00362 Bpe-Chr14:3450469 1.58E-08 dispersed
Bpe14g00362 Bpe-Chr14:3450469 Bpe05g01032 Bpe-Chr5:22904842 3.35E-08 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g332 . . . . . . . . Cmo04g02429 . . . . . . . . . . . . . . . . . . . . . . . . Cone17ag1260 Cone20ag0468 . . . . Blo17g00200 . . Bda13g01503 . Bpe14g00362 . Bma02g00243 . . . . . Car04g02243 Car15g00662 Cpe01g02018 . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003906 1 3 1 1 1 2 2 2 1 1 1 1 2 1 1 2 2 2 2 2 1 1 1 2 2 2 1 1 1 1 44
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe14g00362 Bpe_Chr14 FPKM 0.0 0.263283 0.319738 0.0 0.318383 0.595405 0.0 0.375833 0.106169 0.552786