Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g00366 ATGGCGGCAGTTTCGAGGCCGTTTGGTCATTTGGAACCGGCTTTGAATGGCGGCGTCGTTCGTACTTTCAAATCTGGAACGAACCACCGCCCAGATTCGCCGGTGCGGGGATGTAACTTTCCGGTGAGTACTGAAATTTCTGTCCCGAAGAAAGTTTCTGCGTGGGAGGAGGATGACTACTCCAGCGATGAAGAGAATGAGAATGAATGTCGCGATTTGATTCTGAAGGGAAACAGAGAATTAGAGCCGTCAATCTTGGACGGGAGAGACGAGGGAACAGCTGATAATTGGATCGAGCGAAACTCTAGCATGGTCCGCCTCACAGGGAAACACCCCTTCAATTCGGAGGCTCCATTAACCCGATTAATGAACCACGGCTTTATCACTCCGGTGCCTCTCCACTACGTCAGAAACCACGGAGCCGTTCCGAAGGCCAACTGGGAAACCTGGACCGTCGAGGTCTCCGGCCTCGTCAAACGGCCGATCAAATTCACGATGGATCAGCTGGTCAACGAGTTCCCTTCCAGAGAATTCCCGGTGACCCTCGTCTGCGCCGGCAACCGACGAAAGGAGCAGAACATGGTCAAGCAAACCATCGGTTTCAACTGGGGGGCGGCAGGCGTCTCCACCTCCGTGTGGCGCGGGGTTCCGTTGCGTTACATCCTCAAGAAATGTGGCATCTTCAGCAGAAAAAAAGGCGGTCTAAATGTCTGCTTCGAAGGCGCAGAGGACTTACCCGGCGGCGGTGGGTCAAAGTACGGTACGAGTATCAAAACAGAATTCGCTATGGATTCGTCCAGAGACATCATTTTAGCTTACATGCAAAACGGCGAGAGATTAGCGCCGGACCACGGCTTCCCAGTGAGAATGATAATCCCAGGATTCATCGGCGGCCGGATGGTTAAATGGCTTAAAAGAATCATCGTCACTACCAAAGAATCGGATAACCATTACCATTACAAAGATAATCGAGTTCTTCCTCCCCACATCGACGCAGAGCTAGCGAACGCAGAAGGTTGGTGGTACAAGCCGGAGTATATAATAAACGAGTTGAACATAAACTCAGTCATAACGACGCCATGCCATGAAGAAATCTTGCCCATAAATTCATGGACGACTCAGAGGCCTTACACTCTGAGGGGATATGCTTATTCCGGTGGAGGGAAGAAAGTGACACGTGTGGAGGTGACAATGGACGGGGGAGAGACGTGGCATGTGTGCACGTTGGACCACCCGGAGAAGGGAAACAAGTACGGGAAGTTCTGGTGCTGGTGTTTCTGGTCTCTGGAGGTAGAAGTGCTTGACGTTCTTGCAGCCAAGGAGATAGCGGTCCGAGCTTGGGACGAAACCCTCAACACCCAGCCAGAGAAGCTCAACTGGAACGTCATGGGAATGATGAACAACTGTTGGTTCAGAGTGAAGACAAATGTTTGTAGACCACACAAGGGAGAGATCGGAATTGTGTTTGAGCATCCAACTTTACCCGGAAACCAGTCCGGCGGATGGATGGCCAGAGAGAAACACCTTGAGCTTTCATCGGAAACTAGCCAGACCTTGAAGAAGAGCCTCTCCTCCCCCTTTATGAACACTACCTCCAAGACGTACTCCATCTCGGAGGTCAAGAAACATAATAACGCTCAGTCGGCTTGGATCATCGTCCACGGCCATATCTATGACTGCACGCGCTTCCTCAAAGACCATCCCGGTGGTTCCGATAGTATTCTCATTAATGCTGGAACAGACTGTACTGAAGAATTCGACGCTATTCATTCCGACAAAGCGAAGAAGTTGCTCGAAGATTATAGAATCGGCGAGCTCATCTCCACTGGTTACACCTCCGACTCCTCGTCTTCTTCTCCCAATAACTCAGTCCACGGTGCTTCCAACATGCCCATCCCCTTAGCTCCGATCACTGAAATAGCTCCGACCAAACGGGTCGCCCTCGTTCCGCAAGAAAAAATCCCGTGTAAGCTCATTGCCAAGACTTCACTCTCTCATGACGTTAGGGTTTTCCGATTCGCTTTACCCTCCGAGGATCAGCTTCTTGGGTTGCCTGTCGGCAAACACATATTTCTCTGTGCCGTCATTGAAGGGAAGCTGTGCATGAGAGCTTACACTCCGACTAGCTCCATTGAAGAAGTCGGTTTCTTCGATTTAGTGGTTAAAATCTACTTCAAGAACGTTCATCCAAAGTTCTCCAATGGAGGTCTCATGTCTCAGTATCTAGACTCTCTGCAACTCGGTTCGACCCTTGAAATAAAGGGTCCATTAGGGCACATAGAATACACCGGAAGAGGTAACTTCCTCGTCCATAAAAAACCGAAGTTCGCCCAAAAACTCGCCATGCTCGCCGGCGGAACAGGAATCACGCCGATCTATCAGGTAGTTCAAGCCATTTTGAAGGATCCTGAAGACGAAACAGAAATGTTCATAGTCTACGCTAACAGAACGGAAGACGATATTCTCTTAAAAGATGAGCTTGATTCGTGGGCCAAGAAGCACGAGAGATTGAAGGTTTGGTACGTTATTCAAGAGAGTATAAAAGAAGGATGGAAATACAGTCTTGGCTTCATCACCGAGGCAATCTTGCGGGACCATATTCCCAATGGATCAGAGGACCCCCTAGCGCTGGCGTGTGGACCGCCGGCGATGATTCAGTTTGCAGTGCAGCCAAACCTGGAGAAAATGAACTATGATATCAAGAATTCGTTGCTTGTGTTCTAA 2724 49.82 MAAVSRPFGHLEPALNGGVVRTFKSGTNHRPDSPVRGCNFPVSTEISVPKKVSAWEEDDYSSDEENENECRDLILKGNRELEPSILDGRDEGTADNWIERNSSMVRLTGKHPFNSEAPLTRLMNHGFITPVPLHYVRNHGAVPKANWETWTVEVSGLVKRPIKFTMDQLVNEFPSREFPVTLVCAGNRRKEQNMVKQTIGFNWGAAGVSTSVWRGVPLRYILKKCGIFSRKKGGLNVCFEGAEDLPGGGGSKYGTSIKTEFAMDSSRDIILAYMQNGERLAPDHGFPVRMIIPGFIGGRMVKWLKRIIVTTKESDNHYHYKDNRVLPPHIDAELANAEGWWYKPEYIINELNINSVITTPCHEEILPINSWTTQRPYTLRGYAYSGGGKKVTRVEVTMDGGETWHVCTLDHPEKGNKYGKFWCWCFWSLEVEVLDVLAAKEIAVRAWDETLNTQPEKLNWNVMGMMNNCWFRVKTNVCRPHKGEIGIVFEHPTLPGNQSGGWMAREKHLELSSETSQTLKKSLSSPFMNTTSKTYSISEVKKHNNAQSAWIIVHGHIYDCTRFLKDHPGGSDSILINAGTDCTEEFDAIHSDKAKKLLEDYRIGELISTGYTSDSSSSSPNNSVHGASNMPIPLAPITEIAPTKRVALVPQEKIPCKLIAKTSLSHDVRVFRFALPSEDQLLGLPVGKHIFLCAVIEGKLCMRAYTPTSSIEEVGFFDLVVKIYFKNVHPKFSNGGLMSQYLDSLQLGSTLEIKGPLGHIEYTGRGNFLVHKKPKFAQKLAMLAGGTGITPIYQVVQAILKDPEDETEMFIVYANRTEDDILLKDELDSWAKKHERLKVWYVIQESIKEGWKYSLGFITEAILRDHIPNGSEDPLALACGPPAMIQFAVQPNLEKMNYDIKNSLLVF 907
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3486910 3490535 + Bpe007021.1 Bpe14g00366 114675

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g00366 907 ProSitePatterns Eukaryotic molybdopterin oxidoreductases signature. 156 191 IPR022407 GO:0043546
Bpe14g00366 907 SUPERFAMILY Riboflavin synthase domain-like 646 763 IPR017938 -
Bpe14g00366 907 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 530 609 IPR036400 -
Bpe14g00366 907 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 750 901 IPR039261 -
Bpe14g00366 907 SUPERFAMILY E set domains 350 477 IPR014756 -
Bpe14g00366 907 Pfam Oxidoreductase FAD-binding domain 656 762 IPR008333 -
Bpe14g00366 907 CDD eukary_NR_Moco 90 475 - -
Bpe14g00366 907 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 563 570 IPR018506 GO:0020037
Bpe14g00366 907 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 532 607 IPR001199 -
Bpe14g00366 907 PIRSF Nitr_rd_NADH 26 906 IPR012137 GO:0006809|GO:0042128|GO:0050464
Bpe14g00366 907 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 703 710 IPR001709 GO:0016491
Bpe14g00366 907 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 851 867 IPR001709 GO:0016491
Bpe14g00366 907 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 735 744 IPR001709 GO:0016491
Bpe14g00366 907 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 807 816 IPR001709 GO:0016491
Bpe14g00366 907 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 566 576 IPR001709 GO:0016491
Bpe14g00366 907 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 875 883 IPR001709 GO:0016491
Bpe14g00366 907 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 819 830 IPR001709 GO:0016491
Bpe14g00366 907 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 781 800 IPR001709 GO:0016491
Bpe14g00366 907 PRINTS Cytochrome B5 reductase signature 781 800 - -
Bpe14g00366 907 PRINTS Cytochrome B5 reductase signature 748 762 - -
Bpe14g00366 907 PRINTS Cytochrome B5 reductase signature 703 710 - -
Bpe14g00366 907 PRINTS Cytochrome B5 reductase signature 875 883 - -
Bpe14g00366 907 PRINTS Cytochrome B5 reductase signature 682 693 - -
Bpe14g00366 907 PRINTS Cytochrome B5 reductase signature 819 830 - -
Bpe14g00366 907 Gene3D Translation factors 643 757 - -
Bpe14g00366 907 PANTHER NADH-CYTOCHROME B5 REDUCTASE 65 907 IPR001834 GO:0016491
Bpe14g00366 907 PRINTS Eukaryotic molybdopterin domain signature 348 360 IPR008335 GO:0016491
Bpe14g00366 907 PRINTS Eukaryotic molybdopterin domain signature 264 280 IPR008335 GO:0016491
Bpe14g00366 907 PRINTS Eukaryotic molybdopterin domain signature 420 430 IPR008335 GO:0016491
Bpe14g00366 907 PRINTS Eukaryotic molybdopterin domain signature 281 294 IPR008335 GO:0016491
Bpe14g00366 907 PRINTS Eukaryotic molybdopterin domain signature 393 405 IPR008335 GO:0016491
Bpe14g00366 907 PRINTS Eukaryotic molybdopterin domain signature 445 457 IPR008335 GO:0016491
Bpe14g00366 907 PRINTS Eukaryotic molybdopterin domain signature 191 203 IPR008335 GO:0016491
Bpe14g00366 907 PRINTS Eukaryotic molybdopterin domain signature 127 143 IPR008335 GO:0016491
Bpe14g00366 907 PRINTS Eukaryotic molybdopterin domain signature 379 393 IPR008335 GO:0016491
Bpe14g00366 907 PRINTS Eukaryotic molybdopterin domain signature 458 471 IPR008335 GO:0016491
Bpe14g00366 907 PRINTS Eukaryotic molybdopterin domain signature 180 191 IPR008335 GO:0016491
Bpe14g00366 907 PRINTS Eukaryotic molybdopterin domain signature 297 310 IPR008335 GO:0016491
Bpe14g00366 907 PRINTS Eukaryotic molybdopterin domain signature 206 221 IPR008335 GO:0016491
Bpe14g00366 907 PRINTS Eukaryotic molybdopterin domain signature 105 119 IPR008335 GO:0016491
Bpe14g00366 907 Gene3D - 89 339 IPR036374 -
Bpe14g00366 907 PANTHER NITRATE REDUCTASE 65 907 - -
Bpe14g00366 907 Pfam Oxidoreductase NAD-binding domain 782 889 IPR001433 GO:0016491
Bpe14g00366 907 SUPERFAMILY Oxidoreductase molybdopterin-binding domain 87 348 IPR036374 -
Bpe14g00366 907 Pfam Oxidoreductase molybdopterin binding domain 139 318 IPR000572 -
Bpe14g00366 907 Pfam Mo-co oxidoreductase dimerisation domain 346 477 IPR005066 GO:0016491|GO:0030151
Bpe14g00366 907 Gene3D - 527 609 IPR036400 -
Bpe14g00366 907 Gene3D - 350 525 - -
Bpe14g00366 907 CDD cyt_b5_reduct_like 656 902 - -
Bpe14g00366 907 SMART Cyt_b5_2 535 607 IPR001199 -
Bpe14g00366 907 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 651 763 IPR017927 GO:0016491
Bpe14g00366 907 Pfam Cytochrome b5-like Heme/Steroid binding domain 538 606 IPR001199 -
Bpe14g00366 907 Gene3D - 758 907 IPR039261 -
Bpe14g00366 907 PRINTS Cytochrome B5 signature 567 581 IPR001199 -
Bpe14g00366 907 PRINTS Cytochrome B5 signature 594 606 IPR001199 -
Bpe14g00366 907 PRINTS Cytochrome B5 signature 582 589 IPR001199 -
Bpe14g00366 907 PRINTS Cytochrome B5 signature 557 567 IPR001199 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g00366 K10534 NR; nitrate reductase (NAD(P)H) [EC:1.7.1.1 1.7.1.2 1.7.1.3] - vvi:100264320 1571.6
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bpe02g01621 Bpe14g00366 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01356 Bpe-Chr4:20146957 Bpe14g00366 Bpe-Chr14:3486910 1.54E-48 dispersed
Bpe09g00542 Bpe-Chr9:14194045 Bpe14g00366 Bpe-Chr14:3486910 2.98E-59 dispersed
Bpe11g01495 Bpe-Chr11:11092734 Bpe14g00366 Bpe-Chr14:3486910 6.96E-54 dispersed
Bpe13g01064 Bpe-Chr13:16253587 Bpe14g00366 Bpe-Chr14:3486910 6.41E-40 dispersed
Bpe14g00928 Bpe-Chr14:6926252 Bpe14g00366 Bpe-Chr14:3486910 1.25E-17 dispersed
Bpe14g00366 Bpe-Chr14:3486910 Bpe02g01621 Bpe-Chr2:19078656 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g325 . . . . . . . . Cmo04g02441 Cmo15g00727 . Cma09g00664 . . . Cpe06g00519 . . . . . . . . . . . . . . . . . . Cone20ag0466 Lsi04g02366 Csa04g01830 . . Blo17g00195 Blo18g00197 . Bda13g01500 Bpe02g01621 Bpe14g00366 Bma01g00839 Bma02g00239 Sed04g0506 . Cmo09g00648 . . Car04g02252 Car09g00590 Cpe01g02024 . Bhi09g02640 Tan01g3984 Cmetu09g0993 . Hepe01g2257 Mch11g0805 . Cla11g01515 Cam11g1575 Cec11g1604 Cco11g1602 Clacu11g1730 Cmu11g1548 Cre11g1965 . . Chy07g00682 Cme07g00892
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000829 1 3 2 3 2 2 4 3 3 3 3 3 4 2 3 6 3 1 4 3 5 4 3 3 3 4 3 3 3 1 90
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe14g00366 Bpe_Chr14 FPKM 3.334611 3.87395 9.263942 10.402272 75.048775 51.359077 79.597954 6.163952 6.805281 7.966621