Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g00373 ACATTTTTTGAAATATTTTCCATCTTAGCAGGAACAACACTCTCCGAGTGTGCAAGAGTGTTCACCATAATCAACAACTGCAAAGAGACAATATGGCCGGCAATTACTCCAGGAGAAAATTTCGACGGCGGTGGCTTTCAGCTAAAATCCCGCCAGTCCATCGTCCTGACCGCCCCAGTTGGCTGGTCCGGTCGGATATGGGGTCGGACTGGTTGCAACTTCGATAAAAACGGTAATGGCACTTGCCAAACCGGCTCCTGCGGCTCTTCCCTCAAGTGCAGAGCATCCGGCGAACCTCCGGCTTCGCTCGCCGAGTTCACTCTTGCTGCTTTGGATTTCTACGATGTCAGCCTCGTCGACGGCTTCAACTTACCCATTGCCGTGACTCCCATTAATGGCAAAGGAAACTGCAGCGTCGCCGGGTGTGATAGCGATCTAAGAACCAGTTGTCCGAAGGAACTTTCAGTGAAATCAGGGGGCAAAACCTTAGCTTGCCGGAGCGCCTGCGATGTTTTCAACACCGACAACTATTGCTGCAGAGGGGTATTCGGAAACCCTTCAACTTGTCAGCCGACGTATTATTCGAAGAAATTTAAGGAGGCTTGTCCGACTGCGTATAGCTACGCTTATGACGATCCGACCAGTATCCTCACTTGCTCCGGCACCGATTACATCATCAATTTCTGCTCTTCCAGGCAACAACCGGTGTGCAGTTACCATAACAACAAGCTTGTTTGCAGCGGATCAAATGGATTAAATTCCTTGATAGGAAGAAGATGGTGGTCTGTGATCGCTGCATTATTACTCTTCCTCACTCCA 819 49.69 TFFEIFSILAGTTLSECARVFTIINNCKETIWPAITPGENFDGGGFQLKSRQSIVLTAPVGWSGRIWGRTGCNFDKNGNGTCQTGSCGSSLKCRASGEPPASLAEFTLAALDFYDVSLVDGFNLPIAVTPINGKGNCSVAGCDSDLRTSCPKELSVKSGGKTLACRSACDVFNTDNYCCRGVFGNPSTCQPTYYSKKFKEACPTAYSYAYDDPTSILTCSGTDYIINFCSSRQQPVCSYHNNKLVCSGSNGLNSLIGRRWWSVIAALLLFLTP 273
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3539637 3540536 - Bpe024975 Bpe14g00373 114682

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g00373 273 Gene3D Thaumatin 20 229 IPR037176 -
Bpe14g00373 273 SMART tha2 21 230 IPR001938 -
Bpe14g00373 273 CDD TLP-PA 20 229 - -
Bpe14g00373 273 Pfam Thaumatin family 25 229 IPR001938 -
Bpe14g00373 273 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 4 243 - -
Bpe14g00373 273 PRINTS Pathogenesis-related protein signature 20 32 IPR001938 -
Bpe14g00373 273 PRINTS Pathogenesis-related protein signature 65 76 IPR001938 -
Bpe14g00373 273 PRINTS Pathogenesis-related protein signature 78 107 IPR001938 -
Bpe14g00373 273 PRINTS Pathogenesis-related protein signature 44 53 IPR001938 -
Bpe14g00373 273 PRINTS Pathogenesis-related protein signature 112 128 IPR001938 -
Bpe14g00373 273 PRINTS Pathogenesis-related protein signature 220 229 IPR001938 -
Bpe14g00373 273 SUPERFAMILY Osmotin, thaumatin-like protein 20 230 IPR037176 -
Bpe14g00373 273 PIRSF PR5 1 271 IPR001938 -
Bpe14g00373 273 ProSiteProfiles Thaumatin family profile. 18 229 IPR001938 -
Bpe14g00373 273 PANTHER OS03G0233200 PROTEIN 4 243 IPR001938 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g00373 - - - zju:107421016 471.855
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bpe02g01628 Bpe14g00373 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00077 Bpe-Chr5:1361508 Bpe14g00373 Bpe-Chr14:3539637 4.26E-79 dispersed
Bpe05g00635 Bpe-Chr5:20208853 Bpe14g00373 Bpe-Chr14:3539637 2.67E-58 dispersed
Bpe14g00373 Bpe-Chr14:3539637 Bpe15g00474 Bpe-Chr15:16079990 1.28E-58 dispersed
Bpe14g00373 Bpe-Chr14:3539637 Bpe02g01628 Bpe-Chr2:19125861 6.88E-157 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g310 . . . . . . . . Cmo04g02452 Cmo15g00713 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Blo17g00186 . . Bda13g01491 Bpe02g01628 Bpe14g00373 . Bma02g00227 . . . . . Car04g02271 Car15g00645 Cpe01g02032 . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006626 1 1 2 1 2 1 2 1 1 2 1 1 2 1 1 2 1 0 2 1 1 1 1 1 1 1 1 3 1 1 38
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe14g00373 Bpe_Chr14 FPKM 10.082452 12.017134 14.748368 13.64121 7.15633 6.003653 7.902308 8.528357 7.628291 8.10139