Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g00400 ATGGAAGCTCCTTACGTTCTCCACCGCCATCAACGCCATCCAAGGTCTGTTCCTCTTCCTTCTGCTCCTCCATCGGATTTTCCTCCCCATCCTAATCGTTACTTGCCGCCGCATAATCCTGATAATCCCGTCTTTTCTCATCTTTCGCAACCGCAATCGTTGCATCTTCCCCCTCCTCCTCCGCTGCCTTTCTATCACCGGCTCGATACCCCGCCTCCCCCACGTATGAGCCGTTATCATACTAATCAGTTGACATTCTCTTCCTATGATCACAACAATCGCCTTCTTACCGAGAGCGATCCAGCCGGTGTTGTTAACTTCTCCAGATTTCGCGAATTCACCTCACACTCTCGTATTTTTTGTAATGATAATTGGTCCCATTCAAGGTGTCAGTCGAGAATTGACGCTGATAGTATACCGGTCATGCAGCATTCGCCTGGTGACTTTGAGCGTCAATTAATTAATGGTCAATTTTGTTACACACCTGACAACACGTATCAGCCAGATAGGGTAAGGGGTTTAGAGGGTAATTCTAGGTTTAGGGTGGATCACAATGATGGGCTTATATCGAATTATTGGGAAGAGCACGGATCCAGGGGAGGCAATGAAAATTATCGTGGTCATCCTCAAAATGCATCGGAATTTGTCACATCTTTTCACGACCTTAGTTTTGTTAAAGATCAGATGTCATTAAGCAATGATATTGAATTGAGCTCGGGAGGTTTTAATGACCGAAGCAATTCAGTGTGCGACAGTGAGTTAGTTGGGAGTGGCATTATTGACGATTCTTATGAAATCAAAAGACAAATTGCTAGAGGTGTTCCCAATTCGTTGTTTCAAATGGAAAATAACACAATTGGTAACAATGAGTGGTTTCGAGTGGCAGCTGGTAAGCGTGGACATCATGTTTCAGAAGTGGGAAGGTGTAACAGTGCTAACAGGGGTGGTGGAGAAAGCAGCCATCAATTCAATGAGACTCCAAGGAAACAAGTGCAGAAGAAGAGTGCTTTTCTTAGGCTGCAAATTGCAAAACGTAACCGCAGTGATATAGAAGATGAGTTGGATTATTCAGATAAATTTGAGAAGAAGAGCTTTAGTTTCTTAACAGGGAAAGATCAGAATGGATACAGGGGTGCCAAAATGGAAAAGGTGGAAGAGATAGGGGGAAGTCATGTGGAGCTTGATATTTCATTTAAGTCCAATTCTTTAGTAGCCAAAGCAGTAGTGCCGTCTTCATCTTCAAGTCCTGTGTCTGAGTGCAATACAATTCCAACATGTAGTTATAAAAAAGTCAAGAATTTTTGTACATCTAACCTCTACTTAGCCGGTTCAAAACCAAGTAAATTGGCTCGGAGAACTATGGATATCAATGATTCAACACATCGTGTAAACAACTCTACTTCCTCTGAGATGAACACTGAAAAGTTTGCCCAAAAAGTTTCAGCTACTGCAGTCTGTAATCTGTTAAAACACAATTCAAAGATCTCTTCCTGCATCAAAAATGGTTTGGGTGAAAATGTGGAAGCTGCTGGCTCTATGGTCTCGAATAAAGAAATTACCGCTGTTGGTTGTCCTAAAAGACTTTCTTCCGTGAACATCAAAAAGAAAAAGAATGTGAGGAAATTAGTGAAGGCAGTCGACCCTTGTGTATGTGCAGAAAATTCGCATTCTACAAGAAAGCAAGATGAAAATGTCAACTCTGCAGATATTCCCCTTGGAGCCTTTGATTCTGATTTGAGCATAGAACCATCAAGAGGACAGAGCGTTTCTTCTGGCATTTCTGCAAAGCCTAATGTTTGTTTGAACTCATGTTTGGATAGTCCTAATATATTACTTGAAGATAGAGTAGTATCTGACGCTCCTGTGGCTATGAAGTCAGATAAATGTAAAACTGATGCTAATTTTAATGAGGGACATGTGCCAATAATTCAGGTAAAAGATAATATGTCAGATGCTTTCCTTGGTTCTTCAAGCTTCGGTGAAATAATAGATATTGACCTTCCTGTGATTGAAGATAATTCAGTTGATATATTGAATACTGAGACAGTTACATTGGATAGTGATAGTACAAGGGTAGAAAGATTTCTTGGTCACGAAAAAAAAGGCTCTTTGTTATGCGGAAATAAGATTGGAGATGAATCTCAAGATCCTGTATCTGTTAGTGAAGGGAACATTAAATTCGATTTGGAAAATTGTGGGAAAATAAAAACTGATAAATGCAATGAAAAAAATAAAGTTCCTGACTCAGGAACCATTGTTGGTATTAACAAGCAGCTTTACTCAAATCAGGAGGCCAAAATCCTTCGGGATGACGACACTAAGGAAATGACAGCAGCGGAATTTTTGGTTGGCAATAGTGAACTTGTTTGTTTGTTATCATCTGACGAAATTAGAGGGCATAATAGTTCTATAACTGCAAACTACTCCAACAACCACCAGGGTTCATGTTGTCACAATCGTGGTACTAACTTTCTAGAGAATGGGGCTATTAACTATCCGGGAACTGAGTATGCTGTAGAAGAGATATCTCCAAATCACTTTGCTCTATCATCTGATAATGTTTTAGTGAAAATATCTCCTGTGCATACAATTCCTTTTGCTGGCAGCAAAGAAACTGTTAATAAGAAGGGACTGGTTTCGACTCATTCAAACTTTTCATGTTCAGGCAACCTAGATGTGGACCCTGCAGATTCAAAAACATTGAGTTTATCTTTGAAAGATTCTAGCCAGATCTCAGTTTCTAGAGTTGGAAATATGGCTTGTGGCAAAGAGCCTGATACTAGGGGGGTTAGCATTATGCATAAAAAAAGTTTATCGGATAAGTTGTGTGACACTAAAAATGAAGTCAGTCATGCTATGGATAATAGTTCCAGTGAGAGGTCACCTAGATGTAGAAAGAAGAGGAAAGTGTCCGTCAGCTTTCCCTATTTACCTTTTCCTCGGGCTAATGAGGGTTCTACAAATATTTTAACAGGTAGTCCAGATGTTCAGTTAAGCTCTAATACTGAACCAACAAAACAAGAAGTTAAAGTTGTGGCATCAAGCATTGATGATCTATATGAAGGTAGTTCTATGCCTTGTAGAGATGAGGGTAGTTTGGATCTTGATGTAGATTTTTCTATGGAATTGTTTGGTGCTGTAGTTCCTTGTAGTGATCCTTTGAGTGGTATTAATGACTTGAAACTTCGGTCTTCCGGTGTTGACTCTCATCCAGTTCTGGACAATTTAATCAATCCACTAGTGCATTCTAGTGGTTCATTAACATTTGGAAATGGGCAGAGAGCCAATGCCACTAAAGCTTCAGAAGTAATTAATCAAAATCAAACCAACTTCATGGAAACAGAAATAGGAAGCAAAGAAAAGATTGCGCATGTGACAGACGGGAGAGATGTGATTTATGCCAAGAGTGCTCTAAGAGAGTCTCCTGATGAATATCAATCTCCAGCTTCAGGTCAAGAGGTAACAATAATGAATGAGGAATCTGATCATCTTCCAGGGAAGGATGACTTGCATCGTATTGCAAATTATCTCCATTTATCTTCTGATGGTAATGAGGGGTCTGCTGTTAACTCTAGTGATGAAGTAATTGGGTCTGTGATTGATGGACTATCAAATATGGCCTCTCCTGAAACAGGTTCTGATGCTACTGACAAATTCATGATGAATTCTGAACCATTACTTGCTCAAGCTTTTCTTGAAAAGGTTTTGGATTACAAAAGCAGAGAAGAGAAGTCTATAGTTGTAAGTCAGCCAAAGAAACTTGCTCATAATTTACGTATCCCATCTAGCAATGTTAATCGTAATTCAGGTAATGTAAAATTACCTCTAGTATCACAGGTGTCCAAAAGTGCCTTTAAAGATAGGAAGCTCGTGACTGCTAAATCAATGATTAATAAAAAGCATCTTGGCCATACCATTTTCAGGGGCTTTTCCGGCCAGCCAACTTTCATGTGTGGTTCTTCAAAGAAGTTTGCCTCTTCAATAGGTTCTGTGAAATCTAGGACCTGGCATCGAACGGATAATTCTAATTCTTCTTCTCTTCCCCTCCCGGGGAACAAGCCTTGCTCAAGTGCAGTTCCTACCCTAAGACAATTTTCAGGAAGTGATGGGGTTCACCAGAATTCTTACATTCGCAAGGGTAACAGTCTTGTAAGAAAATCTTCCCCAGTTTCTAGTATACCTATTGGTTCTCATGCTGTGAATTTATTTTCGGATCAGTTAAACTCTTCTAATGCTGAAGAATTGAGGAGTGATGTGAAATCCGAGAGTCTGGTTGGTGTAACTGATTCTTCTATTAATTTGGGGATCAAAGTAACAGAAAATCCTGCCAATAAGCTAGGAATAACCCCGGTTCTTAGTAGTCCTGACACTCTTTCATCTGGGGGTTGTGCACCATCCACGTTGGCAGAGCCACTCCTTAATGATTCCTCGGATTTTACAAAGCAGAGAACTAAAGAAGAGTCTGCTTTTTTAAAGGATTTATTGAAGAATTCTGATAAGCATGAAAATCTAATTTTTCCGAGCATGGAAAATGGGACTGATCTGAGTAATGAGTTTTTGGCATCTTCGAATCTGGAACAAGGAGCACATACAAAGTGCAATTTACATCAATTGGTTTCAACTTCTAATCCTTGTGATCTCAACAGTACAGATAAGGTTCAACCTGTAACCTCTGATGGATATTACAAGAGAAGAAAAAATCAACTAATTCGGGCAGCACTTGATTCTAGTGTTAGTCAGACTCCGATGTCACATCTATCTGACAAGATTTTTAAGTCAGAGCTGGAATATATTGCTAAAGATATTCCTTGCAAGAGTTATACCGGGAGGCGGTTGGCCAAAGGTATGGCAAAGGTACGAAGGCCTGGAAAGTCATCTTTGGTATGGTCACTCTGTGGTTCAATGTCCTCAAAATATGGGAGTAATAATTTGAATGGCCATAAGTTGGTACCACATCTTCCTTGGAAAAGAACTTATAGAAGTCACGCTCGCAACCCAGCTATCATTCCTTATAGTACACTGTCAACAATCAGTAAAAGGTTGCTGTTGTCAAGAAAGAGGGAGACACTGTACACGACATCAAATAATGGATTTTCACTAAAGAAATCCAAAGTATTAAGTGTTGATGGGTCTAGTTTAAAATGGTCAAAATCCATTGATAGGCGCTCAAAGAAAGCTAACGAGGATGCTACAATAGCAGTTGCTGCAGCGAATAGAAAGAAAAGAGAACAGAATGGGATTGCTCGTGTTATTTACAGGACAGACAATAATAGTGGCAGTTCTTCCCATGACGAGCCATCTTGCTCTACTGCTGTCAAGTCTGGGAAAAATGCTAAGATATCTTACGCCCCCAGGAGATTAGTGATTGGAAAAGATGCATATGTTAGAATTGGCAATGGGAATCAGCTCGTTAGAGATCCAAAAAAGCGAATCCGGCGATTGGCTAGTGAGAAAGTTCGATGGAGTTTGCACACAGCAAGAAAGCGGTTAGGCAGGAAGCAGAAATATTGTCAGTTCTTCACTAGATTTGGCACATGTGATAAGAAGGACGGGAAGTGCCCTTATATCCATGATCCTTCTAAAATTGCCGTGTGCACAAAATTTTTAAATGATGCTTGTTCTGATGTCAACTGCAAATTGACTCATAAGATCATTCCAGAAAGAATGCCAGATTGCTCATACTTTTTACAAGGTTTATGCACCAACAAAAGTTGTGCTTATAGACATGTGAATGTGAACCCAAAGGCTTCCACATGTGAAGGATTTCTCAGAGGCTATTGTGCCAATGGCGATGAGTGCCGTGAGAAGCACAGTTATGTATGCCCAGTGTTTGAAGCTACAGGATCCTGTGCCGAGTCCGAATGCAAACTTCACCACCCAAAAAGAAGAAATGTAGTAAAAAAGCGGAAGCGATCAGGGGAGCCCAAGAATGATAGTGGGCGTTATTTTGGATCCATGCCCAACGATTCTACGGAGCCCGAGAAGCTTTCGATGCAGAGTACCAAGCTTTCTGCAGAAGGAGAATTAGCAGACTATATCTGTCTGAATGTCAGTGACGATGAAAGTGGAGAAGTTGGGGGTGATCAGATCTTAGAAGACTTTGATGAGGTAATTAGACCATTTCGTTTAATGAAGTAG 6138 40.27 MEAPYVLHRHQRHPRSVPLPSAPPSDFPPHPNRYLPPHNPDNPVFSHLSQPQSLHLPPPPPLPFYHRLDTPPPPRMSRYHTNQLTFSSYDHNNRLLTESDPAGVVNFSRFREFTSHSRIFCNDNWSHSRCQSRIDADSIPVMQHSPGDFERQLINGQFCYTPDNTYQPDRVRGLEGNSRFRVDHNDGLISNYWEEHGSRGGNENYRGHPQNASEFVTSFHDLSFVKDQMSLSNDIELSSGGFNDRSNSVCDSELVGSGIIDDSYEIKRQIARGVPNSLFQMENNTIGNNEWFRVAAGKRGHHVSEVGRCNSANRGGGESSHQFNETPRKQVQKKSAFLRLQIAKRNRSDIEDELDYSDKFEKKSFSFLTGKDQNGYRGAKMEKVEEIGGSHVELDISFKSNSLVAKAVVPSSSSSPVSECNTIPTCSYKKVKNFCTSNLYLAGSKPSKLARRTMDINDSTHRVNNSTSSEMNTEKFAQKVSATAVCNLLKHNSKISSCIKNGLGENVEAAGSMVSNKEITAVGCPKRLSSVNIKKKKNVRKLVKAVDPCVCAENSHSTRKQDENVNSADIPLGAFDSDLSIEPSRGQSVSSGISAKPNVCLNSCLDSPNILLEDRVVSDAPVAMKSDKCKTDANFNEGHVPIIQVKDNMSDAFLGSSSFGEIIDIDLPVIEDNSVDILNTETVTLDSDSTRVERFLGHEKKGSLLCGNKIGDESQDPVSVSEGNIKFDLENCGKIKTDKCNEKNKVPDSGTIVGINKQLYSNQEAKILRDDDTKEMTAAEFLVGNSELVCLLSSDEIRGHNSSITANYSNNHQGSCCHNRGTNFLENGAINYPGTEYAVEEISPNHFALSSDNVLVKISPVHTIPFAGSKETVNKKGLVSTHSNFSCSGNLDVDPADSKTLSLSLKDSSQISVSRVGNMACGKEPDTRGVSIMHKKSLSDKLCDTKNEVSHAMDNSSSERSPRCRKKRKVSVSFPYLPFPRANEGSTNILTGSPDVQLSSNTEPTKQEVKVVASSIDDLYEGSSMPCRDEGSLDLDVDFSMELFGAVVPCSDPLSGINDLKLRSSGVDSHPVLDNLINPLVHSSGSLTFGNGQRANATKASEVINQNQTNFMETEIGSKEKIAHVTDGRDVIYAKSALRESPDEYQSPASGQEVTIMNEESDHLPGKDDLHRIANYLHLSSDGNEGSAVNSSDEVIGSVIDGLSNMASPETGSDATDKFMMNSEPLLAQAFLEKVLDYKSREEKSIVVSQPKKLAHNLRIPSSNVNRNSGNVKLPLVSQVSKSAFKDRKLVTAKSMINKKHLGHTIFRGFSGQPTFMCGSSKKFASSIGSVKSRTWHRTDNSNSSSLPLPGNKPCSSAVPTLRQFSGSDGVHQNSYIRKGNSLVRKSSPVSSIPIGSHAVNLFSDQLNSSNAEELRSDVKSESLVGVTDSSINLGIKVTENPANKLGITPVLSSPDTLSSGGCAPSTLAEPLLNDSSDFTKQRTKEESAFLKDLLKNSDKHENLIFPSMENGTDLSNEFLASSNLEQGAHTKCNLHQLVSTSNPCDLNSTDKVQPVTSDGYYKRRKNQLIRAALDSSVSQTPMSHLSDKIFKSELEYIAKDIPCKSYTGRRLAKGMAKVRRPGKSSLVWSLCGSMSSKYGSNNLNGHKLVPHLPWKRTYRSHARNPAIIPYSTLSTISKRLLLSRKRETLYTTSNNGFSLKKSKVLSVDGSSLKWSKSIDRRSKKANEDATIAVAAANRKKREQNGIARVIYRTDNNSGSSSHDEPSCSTAVKSGKNAKISYAPRRLVIGKDAYVRIGNGNQLVRDPKKRIRRLASEKVRWSLHTARKRLGRKQKYCQFFTRFGTCDKKDGKCPYIHDPSKIAVCTKFLNDACSDVNCKLTHKIIPERMPDCSYFLQGLCTNKSCAYRHVNVNPKASTCEGFLRGYCANGDECREKHSYVCPVFEATGSCAESECKLHHPKRRNVVKKRKRSGEPKNDSGRYFGSMPNDSTEPEKLSMQSTKLSAEGELADYICLNVSDDESGEVGGDQILEDFDEVIRPFRLMK 2045
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3743962 3752113 + Bpe007053.1 Bpe14g00400 114709

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g00400 2045 Gene3D - 1858 1912 - -
Bpe14g00400 2045 SMART c3hfinal6 1913 1939 IPR000571 GO:0046872
Bpe14g00400 2045 SMART c3hfinal6 1940 1961 IPR000571 GO:0046872
Bpe14g00400 2045 SMART c3hfinal6 1831 1859 IPR000571 GO:0046872
Bpe14g00400 2045 SMART c3hfinal6 1886 1911 IPR000571 GO:0046872
Bpe14g00400 2045 MobiDBLite consensus disorder prediction 1983 1997 - -
Bpe14g00400 2045 MobiDBLite consensus disorder prediction 1963 1997 - -
Bpe14g00400 2045 MobiDBLite consensus disorder prediction 308 331 - -
Bpe14g00400 2045 ProSiteProfiles Zinc finger C3H1-type profile. 1831 1860 IPR000571 GO:0046872
Bpe14g00400 2045 Gene3D - 1913 1974 - -
Bpe14g00400 2045 MobiDBLite consensus disorder prediction 313 331 - -
Bpe14g00400 2045 ProSiteProfiles Zinc finger C3H1-type profile. 1886 1912 IPR000571 GO:0046872
Bpe14g00400 2045 ProSiteProfiles Zinc finger C3H1-type profile. 1913 1940 IPR000571 GO:0046872
Bpe14g00400 2045 MobiDBLite consensus disorder prediction 1753 1772 - -
Bpe14g00400 2045 MobiDBLite consensus disorder prediction 1 59 - -
Bpe14g00400 2045 MobiDBLite consensus disorder prediction 17 38 - -
Bpe14g00400 2045 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 3 382 2044 - -
Bpe14g00400 2045 PANTHER CCCH ZINGC FINGER 382 2044 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g00400 - - - jre:109004825 1001.5
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g208 . . . . . . . . . . Cma01g01036 . Car01g00911 . . . . . . . . . . . . . . . . . . Cone4ag1435 Cone7ag1500 . . . . . . Blo17g00165 . . . . Bpe14g00400 . Bma02g00201 . Cmo01g01075 . . . . . . Cpe02g00855 . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003643 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 0 2 2 1 2 3 12 1 45
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22434 None None None None Bpe TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe14g00400 Bpe_Chr14 FPKM 0.0 0.0 0.715436 0.803686 0.964854 0.685845 0.805914 0.854567 0.866582 0.587872