Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g00482 ATGGCGGCTGCGAATCCTCAGCCTCTGCAGAGCCGTCCCTTCGACGACCATGTACGTGGTCTTATAACGATTGGAGAGGAAGACGACGACTATGAAGATGGAAGTGGCGATGCTCTGGATGATGTCCAGGATGCTCATATGAATTCGGTTAGCGTCGTTAACCATGATGGATTACAGGTAGCGTCACGGACTAGCGAACTTACGCTCTCTTTTGAAGGCGAGGTCTATGTCTTTCCCGCCGTCACGCCTGAAAAGGTGCAGGCAGTGCTTTTGCTTTTGGGGGGTCGTGATTTGCCAAGTGGCATGCGCGCAGTTGAAGTACCTTTTGATCAAAGTACCAGGGGAGTTATGGACCCTCCAAAACGCTCAAATCTCTCACGAAGAATAGCTTCCCTGGTTAGGTTTCGAGAAAAGCGAAAGGAAAGATGTTTTGACAAGAAAATTAGGTATACCGTACGAAAAGAGGTTGCACAGAGGATGCACCGCAAGAATGGTCAATTTGCATCATTGAAAGAAAATTCGGGTGCTTCAAGTTGGGATTCTGCAGAGAATGGCCTACAAGATGGTGTTCGTTCAGAAACTGTTCTACGGAGATGTCAGCATTGTGGTGTTAATGAAAGTAATACCCCTGCAATGCGCCGTGGTCCGGCTGGACCAAGGACATTATGCAATGCATGTGGTCTGATGTGGGCAAATAAAGGTACTTTGAGAGATCTCAGCAAGGGTGGAAGGAGTATTTCTGTTGAACCTGAATCGTCAATGGATATCAAACCTTCTATAACAGAACCAGAAGTTTCTGATTACCAGGATGATCGTGGACCAGAGGATCCTGGTAAGGCTGTAACAGAATGTTCTAGTAATCCTTCTGTCCACCAACATCATGAAAATTTGCACCGAGATCTTATGGACTCTTTGCCCAAGCAAATGGACCATTCTTCAGGGAATGATGAGGAGCTGGAACAGGAACCATTGGGTGAACTTGGTACAGAGTTAGATATCCCTGCTAACTTTGTTTAG 1017 46.51 MAAANPQPLQSRPFDDHVRGLITIGEEDDDYEDGSGDALDDVQDAHMNSVSVVNHDGLQVASRTSELTLSFEGEVYVFPAVTPEKVQAVLLLLGGRDLPSGMRAVEVPFDQSTRGVMDPPKRSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFASLKENSGASSWDSAENGLQDGVRSETVLRRCQHCGVNESNTPAMRRGPAGPRTLCNACGLMWANKGTLRDLSKGGRSISVEPESSMDIKPSITEPEVSDYQDDRGPEDPGKAVTECSSNPSVHQHHENLHRDLMDSLPKQMDHSSGNDEELEQEPLGELGTELDIPANFV 338
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4304540 4308138 - Bpe007131.1 Bpe14g00482 114791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g00482 338 ProSiteProfiles CCT domain profile. 128 170 IPR010402 GO:0005515
Bpe14g00482 338 CDD ZnF_GATA 198 245 IPR000679 GO:0006355|GO:0043565
Bpe14g00482 338 Pfam tify domain 63 94 IPR010399 -
Bpe14g00482 338 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 194 246 - -
Bpe14g00482 338 ProSiteProfiles Tify domain profile. 60 95 IPR010399 -
Bpe14g00482 338 Pfam GATA zinc finger 199 235 IPR000679 GO:0006355|GO:0043565
Bpe14g00482 338 Pfam CCT motif 128 169 IPR010402 GO:0005515
Bpe14g00482 338 ProSitePatterns GATA-type zinc finger domain. 199 226 IPR000679 GO:0006355|GO:0043565
Bpe14g00482 338 PANTHER GATA TRANSCRIPTION FACTOR 28-LIKE ISOFORM X1 1 337 - -
Bpe14g00482 338 ProSiteProfiles GATA-type zinc finger domain profile. 193 249 IPR000679 GO:0006355|GO:0043565
Bpe14g00482 338 SMART GATA_3 193 246 IPR000679 GO:0006355|GO:0043565
Bpe14g00482 338 MobiDBLite consensus disorder prediction 264 278 - -
Bpe14g00482 338 Gene3D - 191 249 IPR013088 GO:0006355|GO:0008270
Bpe14g00482 338 SMART tify_2 60 95 IPR010399 -
Bpe14g00482 338 PANTHER GATA TRANSCRIPTION FACTOR 28 1 337 IPR045280 GO:0006355
Bpe14g00482 338 MobiDBLite consensus disorder prediction 292 318 - -
Bpe14g00482 338 MobiDBLite consensus disorder prediction 239 338 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00145 Bpe-Chr2:998149 Bpe14g00482 Bpe-Chr14:4304540 1.54E-69 dispersed
Bpe02g00146 Bpe-Chr2:1002727 Bpe14g00482 Bpe-Chr14:4304540 2.98E-139 dispersed
Bpe07g00312 Bpe-Chr7:2282903 Bpe14g00482 Bpe-Chr14:4304540 3.27E-69 dispersed
Bpe14g00482 Bpe-Chr14:4304540 Bpe07g00775 Bpe-Chr7:14232191 1.53E-10 dispersed
Bpe14g00482 Bpe-Chr14:4304540 Bpe04g00413 Bpe-Chr4:2603195 7.72E-70 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22436 PF06203 CCT 1.30E-13 CL0281 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g00482 - - mcha:111004894 473.396