Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe14g00482 | ATGGCGGCTGCGAATCCTCAGCCTCTGCAGAGCCGTCCCTTCGACGACCATGTACGTGGTCTTATAACGATTGGAGAGGAAGACGACGACTATGAAGATGGAAGTGGCGATGCTCTGGATGATGTCCAGGATGCTCATATGAATTCGGTTAGCGTCGTTAACCATGATGGATTACAGGTAGCGTCACGGACTAGCGAACTTACGCTCTCTTTTGAAGGCGAGGTCTATGTCTTTCCCGCCGTCACGCCTGAAAAGGTGCAGGCAGTGCTTTTGCTTTTGGGGGGTCGTGATTTGCCAAGTGGCATGCGCGCAGTTGAAGTACCTTTTGATCAAAGTACCAGGGGAGTTATGGACCCTCCAAAACGCTCAAATCTCTCACGAAGAATAGCTTCCCTGGTTAGGTTTCGAGAAAAGCGAAAGGAAAGATGTTTTGACAAGAAAATTAGGTATACCGTACGAAAAGAGGTTGCACAGAGGATGCACCGCAAGAATGGTCAATTTGCATCATTGAAAGAAAATTCGGGTGCTTCAAGTTGGGATTCTGCAGAGAATGGCCTACAAGATGGTGTTCGTTCAGAAACTGTTCTACGGAGATGTCAGCATTGTGGTGTTAATGAAAGTAATACCCCTGCAATGCGCCGTGGTCCGGCTGGACCAAGGACATTATGCAATGCATGTGGTCTGATGTGGGCAAATAAAGGTACTTTGAGAGATCTCAGCAAGGGTGGAAGGAGTATTTCTGTTGAACCTGAATCGTCAATGGATATCAAACCTTCTATAACAGAACCAGAAGTTTCTGATTACCAGGATGATCGTGGACCAGAGGATCCTGGTAAGGCTGTAACAGAATGTTCTAGTAATCCTTCTGTCCACCAACATCATGAAAATTTGCACCGAGATCTTATGGACTCTTTGCCCAAGCAAATGGACCATTCTTCAGGGAATGATGAGGAGCTGGAACAGGAACCATTGGGTGAACTTGGTACAGAGTTAGATATCCCTGCTAACTTTGTTTAG | 1017 | 46.51 | MAAANPQPLQSRPFDDHVRGLITIGEEDDDYEDGSGDALDDVQDAHMNSVSVVNHDGLQVASRTSELTLSFEGEVYVFPAVTPEKVQAVLLLLGGRDLPSGMRAVEVPFDQSTRGVMDPPKRSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFASLKENSGASSWDSAENGLQDGVRSETVLRRCQHCGVNESNTPAMRRGPAGPRTLCNACGLMWANKGTLRDLSKGGRSISVEPESSMDIKPSITEPEVSDYQDDRGPEDPGKAVTECSSNPSVHQHHENLHRDLMDSLPKQMDHSSGNDEELEQEPLGELGTELDIPANFV | 338 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 4304540 | 4308138 | - | Bpe007131.1 | Bpe14g00482 | 114791 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe14g00482 | 338 | ProSiteProfiles | CCT domain profile. | 128 | 170 | IPR010402 | GO:0005515 | |
Bpe14g00482 | 338 | CDD | ZnF_GATA | 198 | 245 | IPR000679 | GO:0006355|GO:0043565 | |
Bpe14g00482 | 338 | Pfam | tify domain | 63 | 94 | IPR010399 | - | |
Bpe14g00482 | 338 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 194 | 246 | - | - | |
Bpe14g00482 | 338 | ProSiteProfiles | Tify domain profile. | 60 | 95 | IPR010399 | - | |
Bpe14g00482 | 338 | Pfam | GATA zinc finger | 199 | 235 | IPR000679 | GO:0006355|GO:0043565 | |
Bpe14g00482 | 338 | Pfam | CCT motif | 128 | 169 | IPR010402 | GO:0005515 | |
Bpe14g00482 | 338 | ProSitePatterns | GATA-type zinc finger domain. | 199 | 226 | IPR000679 | GO:0006355|GO:0043565 | |
Bpe14g00482 | 338 | PANTHER | GATA TRANSCRIPTION FACTOR 28-LIKE ISOFORM X1 | 1 | 337 | - | - | |
Bpe14g00482 | 338 | ProSiteProfiles | GATA-type zinc finger domain profile. | 193 | 249 | IPR000679 | GO:0006355|GO:0043565 | |
Bpe14g00482 | 338 | SMART | GATA_3 | 193 | 246 | IPR000679 | GO:0006355|GO:0043565 | |
Bpe14g00482 | 338 | MobiDBLite | consensus disorder prediction | 264 | 278 | - | - | |
Bpe14g00482 | 338 | Gene3D | - | 191 | 249 | IPR013088 | GO:0006355|GO:0008270 | |
Bpe14g00482 | 338 | SMART | tify_2 | 60 | 95 | IPR010399 | - | |
Bpe14g00482 | 338 | PANTHER | GATA TRANSCRIPTION FACTOR 28 | 1 | 337 | IPR045280 | GO:0006355 | |
Bpe14g00482 | 338 | MobiDBLite | consensus disorder prediction | 292 | 318 | - | - | |
Bpe14g00482 | 338 | MobiDBLite | consensus disorder prediction | 239 | 338 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe02g00145 | Bpe-Chr2:998149 | Bpe14g00482 | Bpe-Chr14:4304540 | 1.54E-69 | dispersed | |
Bpe02g00146 | Bpe-Chr2:1002727 | Bpe14g00482 | Bpe-Chr14:4304540 | 2.98E-139 | dispersed | |
Bpe07g00312 | Bpe-Chr7:2282903 | Bpe14g00482 | Bpe-Chr14:4304540 | 3.27E-69 | dispersed | |
Bpe14g00482 | Bpe-Chr14:4304540 | Bpe07g00775 | Bpe-Chr7:14232191 | 1.53E-10 | dispersed | |
Bpe14g00482 | Bpe-Chr14:4304540 | Bpe04g00413 | Bpe-Chr4:2603195 | 7.72E-70 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
22436 | PF06203 | CCT | 1.30E-13 | CL0281 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe14g00482 | - | - | mcha:111004894 | 473.396 |