Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g00516 GCGATGACTTCTGAAGCTCGAAATTCAGAAACTGAGAGCACCTCGAATTCAAACTCAAACTCTTTCTCGTCGACGCCAGCGTCCCCTTCTTCGCCACCCTCCACACAATCCCTTCAGGACCCTCTGTTAATCCCAAATTCGCCTTCGCCGGAACTGAAGAAGAACAAGCGAATGAGGGATACCAGCAAGCACCCTCTTTACAGAGGCGTTCGAATGCGCAGTTGGGGCAAATGGGTGTCTGAAATTCGCGAGCCTCGCAAGAAATCTCGCATTTGGCTTGGTACTTTTCCTACTGCTGAAATGGCTGCTAGAGCTCACGACGTCGCAGCCTTGAGCATCAAAGGTAGTTCTGCCATTCTCAACTTCCCCGACCTCGTCGGCTCTCTTCCTCGCCCGGTCTCTCTCGCTCCGAGAGATGTTCAAGCAGCGGCAGCGAAGGCCGCCCAGATGGAGAAATTCGAGTCCACGTCTTCAACGCCGTCGTCAACTATAGTGTCAGCGATGGAGTTTTTGGCGTCGACTGCTAGCGAATCGGATGATTTAGGGGAGATCGTTGAGTTGCCAAGCTTAGGGACGAGCTACGAGTCGAACGAGTTGAGAAATGAGTCTGTGTTAGTGGACTCAGTGGATGGTTGGTTATACCAACCACCATGGTTGCAGAGCTTGGAGGATTGTGGGCTCTACAATGCCAGCGAGGAGTTGACCGCAGGAAATTGTGGTTTGATATCAAGCGGTTTTGAGGGTTTGCTCTGGAACTATTGA 762 51.84 AMTSEARNSETESTSNSNSNSFSSTPASPSSPPSTQSLQDPLLIPNSPSPELKKNKRMRDTSKHPLYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAARAHDVAALSIKGSSAILNFPDLVGSLPRPVSLAPRDVQAAAAKAAQMEKFESTSSTPSSTIVSAMEFLASTASESDDLGEIVELPSLGTSYESNELRNESVLVDSVDGWLYQPPWLQSLEDCGLYNASEELTAGNCGLISSGFEGLLWNY 253
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4538438 4539199 + Bpe007166.1 Bpe14g00516 114825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g00516 253 CDD AP2 65 125 IPR001471 GO:0003700|GO:0006355
Bpe14g00516 253 ProSiteProfiles AP2/ERF domain profile. 66 123 IPR001471 GO:0003700|GO:0006355
Bpe14g00516 253 PRINTS Ethylene responsive element binding protein signature 67 78 IPR001471 GO:0003700|GO:0006355
Bpe14g00516 253 PRINTS Ethylene responsive element binding protein signature 89 105 IPR001471 GO:0003700|GO:0006355
Bpe14g00516 253 Pfam AP2 domain 65 115 IPR001471 GO:0003700|GO:0006355
Bpe14g00516 253 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-LIKE 6 252 - -
Bpe14g00516 253 SMART rav1_2 66 129 IPR001471 GO:0003700|GO:0006355
Bpe14g00516 253 Gene3D AP2/ERF domain 66 124 IPR036955 GO:0003700|GO:0006355
Bpe14g00516 253 MobiDBLite consensus disorder prediction 1 65 - -
Bpe14g00516 253 SUPERFAMILY DNA-binding domain 66 124 IPR016177 GO:0003677
Bpe14g00516 253 MobiDBLite consensus disorder prediction 1 44 - -
Bpe14g00516 253 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 6 252 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g02241 Bpe-Chr2:23387605 Bpe14g00516 Bpe-Chr14:4538438 1.10E-54 dispersed
Bpe08g00494 Bpe-Chr8:3241344 Bpe14g00516 Bpe-Chr14:4538438 7.14E-55 dispersed
Bpe13g01287 Bpe-Chr13:18029116 Bpe14g00516 Bpe-Chr14:4538438 4.93E-57 dispersed
Bpe14g00516 Bpe-Chr14:4538438 Bpe05g00566 Bpe-Chr5:19796795 9.86E-39 dispersed
Bpe14g00516 Bpe-Chr14:4538438 Bpe02g01182 Bpe-Chr2:15488200 4.50E-112 wgd
Bpe14g00516 Bpe-Chr14:4538438 Bpe02g00170 Bpe-Chr2:1171933 1.50E-78 wgd
Bpe14g00516 Bpe-Chr14:4538438 Bpe04g00398 Bpe-Chr4:2498008 5.11E-79 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22442 PF00847 AP2 8.90E-14 CL0081 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g00516 K09286 - ming:122075956 269.626