Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g00534 ATGGAAATTTGTTCGAGAGAAATTGAAGGAAAACTAGCAAATGATCCTATTTTTATGGATAAGATGAGAAGCCAGTCTTCGTCCTCCCGATGCCTGTATGTGACTGGACCAGTGATAGTGGGGGCGGGGCCATCAGGGCTAGCCACTGCCGCTTGCCTGAAACTTAAAGGCGTCTCGAGCCTTCTTCTCGAAAGATCCAACTGTATAGCCGCTTTATGGCAACTCAAAACCTACGATCGTCTGAGCCTTCATCTTCCCAAGCAATTTTGCGAGCTACCTTTCATGGGGTTTCCTCCGAATTACCCCACTTACCCTTCCAAACAACAATTCGTCGACTACCTGGAAGACTACGCCGAGAAGTTTGATATTAGGCCGAGGTTTAATGAGACTGTGTCAGAGGCCGAATACGATGCGAATATTGGGTTATGGCGCGTGAGGAGCGTGGGTTTGAAGGGGGCGACGACGGAGTACGTTTGCCGGTGGTTGATTGTGGCGACTGGGGAGAATGCGGAAGAGGTGTTACCGGAATTTGAAGGAGCAGAGGAATTCGATGGGCCTATTCGGCATACCAGTTCGTACAAGAGCGGGGAAGAGTTTAGAGAGAGAAAAGTTTTGGTGGTCGGGTGTGGTAATTCAGGAATGGAGGTCTGCTTGGATCTCTGCGATCATAATGCCAGCCCATCTCTCGTCGTTAGAAACACAGTACACGTCCTACCACGAGAGATGCTGGGAAAATCAACTTTCGGTCTGTCTATGTGGTTGCTCAAGTGGCTTCCCATTCGTTTTGTCGACCGGTTTTTACTGATCGTTTCCCGGTTCATGCTGGGGGACACATCCGAACTCGGGTTGGACAGACCGAAATTGGGTCCTCTGGAGCTCAAGAACATCTCAGGGAAGACCCCAGTATTGGATGTTGGAACGCTGTCCAAGATCAAAAGTGGAGACATTAAGGTATGTCCAAGCATCAAACGGCTAAAATTCCACGCAGTGGAGTTTGTGAATGGACGAAGAGAGAACTTTGATGCTATCATCTTAGCCACTGGTTACAGAAGCAACGTACCCTACTGGCTAAAGGAGGGAGATATGTTTTCAAAAGAAGAAGGGTTTCCAAGAAGAGCATTTCCAGATGGGTGGAAAGGAGAACGAGGATTGTATGCAGTAGGGTTTACGAGAAGAGGACTGCTCGGAGCTTCAATGGATGCTAAGAGAATTGCAGAGGACATCCAGCGGTGTAGCACGGCCGATCAACCAAAGCACTGTAATAACCTCTTTACCAACTCCTCCATTTAG 1290 48.53 MEICSREIEGKLANDPIFMDKMRSQSSSSRCLYVTGPVIVGAGPSGLATAACLKLKGVSSLLLERSNCIAALWQLKTYDRLSLHLPKQFCELPFMGFPPNYPTYPSKQQFVDYLEDYAEKFDIRPRFNETVSEAEYDANIGLWRVRSVGLKGATTEYVCRWLIVATGENAEEVLPEFEGAEEFDGPIRHTSSYKSGEEFRERKVLVVGCGNSGMEVCLDLCDHNASPSLVVRNTVHVLPREMLGKSTFGLSMWLLKWLPIRFVDRFLLIVSRFMLGDTSELGLDRPKLGPLELKNISGKTPVLDVGTLSKIKSGDIKVCPSIKRLKFHAVEFVNGRRENFDAIILATGYRSNVPYWLKEGDMFSKEEGFPRRAFPDGWKGERGLYAVGFTRRGLLGASMDAKRIAEDIQRCSTADQPKHCNNLFTNSSI 429
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4654913 4657146 - Bpe007184.1 Bpe14g00534 114843

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g00534 429 PRINTS Pyridine nucleotide disulphide reductase class-II signature 36 58 - -
Bpe14g00534 429 PRINTS Pyridine nucleotide disulphide reductase class-II signature 199 223 - -
Bpe14g00534 429 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 25 418 - -
Bpe14g00534 429 SUPERFAMILY FAD/NAD(P)-binding domain 201 410 IPR036188 -
Bpe14g00534 429 Gene3D - 37 417 IPR036188 -
Bpe14g00534 429 SUPERFAMILY FAD/NAD(P)-binding domain 38 307 IPR036188 -
Bpe14g00534 429 PRINTS FAD-dependent pyridine nucleotide reductase signature 203 221 - -
Bpe14g00534 429 PRINTS FAD-dependent pyridine nucleotide reductase signature 37 56 - -
Bpe14g00534 429 PRINTS FAD-dependent pyridine nucleotide reductase signature 159 177 - -
Bpe14g00534 429 Pfam Flavin-binding monooxygenase-like 39 356 IPR020946 GO:0004499|GO:0050660|GO:0050661
Bpe14g00534 429 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA6 25 418 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g00534 K11816 YUCCA; indole-3-pyruvate monooxygenase [EC:1.14.13.168] - pvy:116124463 670.618
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bpe02g01196 Bpe14g00534 CCT
Bpe02g01196 Bpe14g00534 ECH
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00529 Bpe-Chr1:3419989 Bpe14g00534 Bpe-Chr14:4654913 0 dispersed
Bpe02g01231 Bpe-Chr2:15940868 Bpe14g00534 Bpe-Chr14:4654913 2.72E-177 dispersed
Bpe08g00471 Bpe-Chr8:3059566 Bpe14g00534 Bpe-Chr14:4654913 0 dispersed
Bpe10g00321 Bpe-Chr10:10718360 Bpe14g00534 Bpe-Chr14:4654913 1.75E-176 dispersed
Bpe13g01308 Bpe-Chr13:18223157 Bpe14g00534 Bpe-Chr14:4654913 0 dispersed
Bpe14g00534 Bpe-Chr14:4654913 Bpe02g01196 Bpe-Chr2:15650513 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g339 . . . Bda03g00026 Bpe02g01196 . Bma04g00024 . Cmo05g00631 Cmo12g00219 . Cma05g00605 . Car12g00249 Sed01g1287 Cpe07g00228 . Bhi04g00822 Tan02g2580 Cmetu03g1256 . Hepe10g0344 . Lcy13g1389 . . . . . . . Cone4ag1539 Cone7ag1413 Cone17ag1107 Cone20ag0614 . . . Cme03g01726 Blo17g00055 Blo18g00069 . . Bpe14g00534 . Bma01g01332 Bma02g00070 . . . . Cma12g00265 . Car05g00547 Cpe11g00528 . . . . . . . . Cla08g01237 Cam08g1694 Cec08g1273 Cco08g1394 Clacu08g1391 . Cre08g1176 Lsi08g01100 . Chy03g01231 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000974 4 2 5 4 5 2 3 2 2 2 2 2 4 2 2 4 2 7 4 2 2 2 2 2 2 2 2 2 2 3 83
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe14g00534 Bpe_Chr14 FPKM 48.977421 56.516068 36.773422 41.260769 8.958201 5.433568 9.161089 35.643845 43.541897 47.917271